EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPFOG00000006120 (Gene tree)
Gene ID: 103146091
Gene Symbol: -
Alias: -
Full Name: RNA-binding Raly-like protein
Gene Type: protein_coding
Species: Poecilia_formosa
Status: putative
Strand: Plus strand
Length: 37342 bases
Position: chrKI519761.1:1417242-1454583
Accession: 103146091
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPFOP00000029155	RRM_1	PF00076.22	4.5e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPFOT00000006067	-	1743	XM_007563835	ENSPFOP00000006057	282 (aa)	XP_007563897	A0A087XJV4
ENSPFOT00000031740	-	894	-	ENSPFOP00000029155	298 (aa)	-	A0A096MCL4

Gene Model

Click here to download ENSPFOG00000006120's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000006120's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPFOG00000006120	-	85	50.193	ENSPFOG00000002643	-	85	48.822
ENSPFOG00000006120	-	77	52.766	ENSPFOG00000001583	-	73	49.200

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPFOG00000006120	-	99	88.435	ENSAPOG00000008744	-	97	88.435	Acanthochromis_polyacanthus
ENSPFOG00000006120	-	99	83.333	ENSACIG00000007143	-	97	83.333	Amphilophus_citrinellus
ENSPFOG00000006120	-	99	90.136	ENSAOCG00000023599	-	97	90.136	Amphiprion_ocellaris
ENSPFOG00000006120	-	99	70.470	ENSAOCG00000001605	-	97	70.470	Amphiprion_ocellaris
ENSPFOG00000006120	-	99	89.527	ENSATEG00000022219	-	93	89.527	Anabas_testudineus
ENSPFOG00000006120	-	88	69.466	ENSATEG00000023356	-	96	69.466	Anabas_testudineus
ENSPFOG00000006120	-	99	89.796	ENSACLG00000011720	-	97	89.456	Astatotilapia_calliptera
ENSPFOG00000006120	-	99	69.900	ENSACLG00000006949	-	99	68.730	Astatotilapia_calliptera
ENSPFOG00000006120	-	99	68.333	ENSAMXG00000019031	-	97	68.792	Astyanax_mexicanus
ENSPFOG00000006120	-	94	63.214	ENSAMXG00000032617	-	98	58.086	Astyanax_mexicanus
ENSPFOG00000006120	-	99	78.231	ENSCSEG00000014237	-	97	78.231	Cynoglossus_semilaevis
ENSPFOG00000006120	-	99	90.816	ENSCVAG00000013624	-	97	90.816	Cyprinodon_variegatus
ENSPFOG00000006120	-	99	70.000	ENSCVAG00000018104	-	97	70.707	Cyprinodon_variegatus
ENSPFOG00000006120	-	65	67.010	ENSDARG00000090292	ralyl	81	72.832	Danio_rerio
ENSPFOG00000006120	-	95	61.972	ENSELUG00000001702	-	96	62.544	Esox_lucius
ENSPFOG00000006120	-	59	68.750	ENSGMOG00000005914	-	100	68.750	Gadus_morhua
ENSPFOG00000006120	-	63	74.074	ENSGACG00000004991	-	91	77.401	Gasterosteus_aculeatus
ENSPFOG00000006120	-	99	89.796	ENSHBUG00000010040	-	97	89.796	Haplochromis_burtoni
ENSPFOG00000006120	-	99	69.000	ENSHBUG00000015412	-	97	69.463	Haplochromis_burtoni
ENSPFOG00000006120	-	99	69.333	ENSIPUG00000000507	ralyl	97	69.799	Ictalurus_punctatus
ENSPFOG00000006120	-	99	69.333	ENSKMAG00000018155	-	97	70.470	Kryptolebias_marmoratus
ENSPFOG00000006120	-	99	87.075	ENSKMAG00000022093	-	97	87.755	Kryptolebias_marmoratus
ENSPFOG00000006120	-	99	68.439	ENSLBEG00000011011	-	97	68.896	Labrus_bergylta
ENSPFOG00000006120	-	99	86.395	ENSLBEG00000012873	-	97	86.395	Labrus_bergylta
ENSPFOG00000006120	-	99	67.000	ENSLOCG00000012787	ralyl	97	66.000	Lepisosteus_oculatus
ENSPFOG00000006120	-	99	86.735	ENSMAMG00000001723	-	95	86.735	Mastacembelus_armatus
ENSPFOG00000006120	-	100	68.730	ENSMZEG00005018748	-	99	68.730	Maylandia_zebra
ENSPFOG00000006120	-	99	89.796	ENSMZEG00005024447	-	97	89.456	Maylandia_zebra
ENSPFOG00000006120	-	99	86.149	ENSMMOG00000020441	-	86	86.149	Mola_mola
ENSPFOG00000006120	-	93	69.858	ENSMALG00000012952	-	97	68.456	Monopterus_albus
ENSPFOG00000006120	-	99	87.415	ENSMALG00000019019	-	76	87.415	Monopterus_albus
ENSPFOG00000006120	-	99	84.014	ENSNBRG00000011206	-	97	84.014	Neolamprologus_brichardi
ENSPFOG00000006120	-	100	68.730	ENSNBRG00000011376	-	99	68.730	Neolamprologus_brichardi
ENSPFOG00000006120	-	99	70.333	ENSORLG00000012719	-	97	70.805	Oryzias_latipes
ENSPFOG00000006120	-	99	84.014	ENSORLG00000017934	-	97	83.673	Oryzias_latipes
ENSPFOG00000006120	-	99	82.993	ENSORLG00020000082	-	97	82.653	Oryzias_latipes_hni
ENSPFOG00000006120	-	99	70.333	ENSORLG00020004438	-	97	70.805	Oryzias_latipes_hni
ENSPFOG00000006120	-	99	71.141	ENSORLG00015004727	-	97	71.141	Oryzias_latipes_hsok
ENSPFOG00000006120	-	93	83.813	ENSORLG00015004280	-	97	82.993	Oryzias_latipes_hsok
ENSPFOG00000006120	-	93	84.532	ENSOMEG00000011821	-	97	84.354	Oryzias_melastigma
ENSPFOG00000006120	-	99	70.470	ENSOMEG00000001170	-	97	70.470	Oryzias_melastigma
ENSPFOG00000006120	-	99	69.831	ENSPKIG00000015926	-	97	69.831	Paramormyrops_kingsleyae
ENSPFOG00000006120	-	81	64.754	ENSPMGG00000014481	-	95	67.083	Periophthalmus_magnuspinnatus
ENSPFOG00000006120	-	99	75.168	ENSPMGG00000009532	-	98	72.483	Periophthalmus_magnuspinnatus
ENSPFOG00000006120	-	99	88.552	ENSPLAG00000009877	-	76	88.552	Poecilia_latipinna
ENSPFOG00000006120	-	99	71.141	ENSPLAG00000011323	ralyl	100	71.141	Poecilia_latipinna
ENSPFOG00000006120	-	99	71.141	ENSPMEG00000023847	ralyl	100	71.141	Poecilia_mexicana
ENSPFOG00000006120	-	99	88.552	ENSPMEG00000013624	-	80	88.552	Poecilia_mexicana
ENSPFOG00000006120	-	99	70.134	ENSPREG00000001956	ralyl	100	70.134	Poecilia_reticulata
ENSPFOG00000006120	-	99	94.932	ENSPREG00000013805	-	97	88.217	Poecilia_reticulata
ENSPFOG00000006120	-	99	84.014	ENSPNYG00000008772	-	97	84.014	Pundamilia_nyererei
ENSPFOG00000006120	-	100	68.730	ENSPNYG00000003548	-	99	68.730	Pundamilia_nyererei
ENSPFOG00000006120	-	99	68.792	ENSPNAG00000000498	-	86	68.227	Pygocentrus_nattereri
ENSPFOG00000006120	-	93	64.748	ENSPNAG00000026098	-	97	63.605	Pygocentrus_nattereri
ENSPFOG00000006120	-	99	62.626	ENSSFOG00015004575	-	96	62.626	Scleropages_formosus
ENSPFOG00000006120	-	99	70.470	ENSSFOG00015009401	-	97	70.470	Scleropages_formosus
ENSPFOG00000006120	-	99	68.667	ENSSMAG00000005608	-	97	70.234	Scophthalmus_maximus
ENSPFOG00000006120	-	99	85.374	ENSSMAG00000015907	-	93	85.374	Scophthalmus_maximus
ENSPFOG00000006120	-	99	89.796	ENSSDUG00000012473	-	97	89.796	Seriola_dumerili
ENSPFOG00000006120	-	99	69.667	ENSSDUG00000007587	-	97	70.134	Seriola_dumerili
ENSPFOG00000006120	-	99	89.456	ENSSLDG00000011534	-	97	89.456	Seriola_lalandi_dorsalis
ENSPFOG00000006120	-	99	69.103	ENSSLDG00000020603	-	97	69.128	Seriola_lalandi_dorsalis
ENSPFOG00000006120	-	99	76.531	ENSSPAG00000013858	-	93	75.510	Stegastes_partitus
ENSPFOG00000006120	-	99	84.014	ENSTRUG00000003829	-	95	82.653	Takifugu_rubripes
ENSPFOG00000006120	-	99	83.673	ENSTNIG00000005594	-	99	83.673	Tetraodon_nigroviridis
ENSPFOG00000006120	-	99	61.589	ENSXETG00000017729	ralyl	97	61.258	Xenopus_tropicalis
ENSPFOG00000006120	-	99	71.141	ENSXCOG00000015156	-	93	71.906	Xiphophorus_couchianus
ENSPFOG00000006120	-	99	93.878	ENSXMAG00000007614	-	97	93.878	Xiphophorus_maculatus
ENSPFOG00000006120	-	99	71.141	ENSXMAG00000008396	-	97	70.805	Xiphophorus_maculatus