EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPFOG00000006122 (Gene tree)
Gene ID: 103134873
Gene Symbol: grsf1
Alias: -
Full Name: heterogeneous nuclear ribonucleoprotein F-like
Gene Type: protein_coding
Species: Poecilia_formosa
Status: putative
Strand: Minus strand
Length: 6560 bases
Position: chrKI519630.1:639231-645790
Accession: 103134873
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPFOP00000006081	RRM_1	PF00076.22	4.4e-23	1	2
ENSPFOP00000006081	RRM_1	PF00076.22	4.4e-23	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPFOT00000006091	-	1479	XM_007547353	ENSPFOP00000006081	405 (aa)	XP_007547414	A0A087XJX8

Gene Model

Click here to download ENSPFOG00000006122's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000006122's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPFOG00000006122	grsf1	77	41.718	ENSPFOG00000004097	hnrnph1	81	41.390
ENSPFOG00000006122	grsf1	77	55.696	ENSPFOG00000015322	HNRNPH3	68	55.696

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPFOG00000006122	grsf1	99	62.621	ENSAPOG00000012487	grsf1	99	61.893	Acanthochromis_polyacanthus
ENSPFOG00000006122	grsf1	99	61.858	ENSACIG00000005871	grsf1	99	62.347	Amphilophus_citrinellus
ENSPFOG00000006122	grsf1	99	64.128	ENSAOCG00000017462	-	99	62.654	Amphiprion_ocellaris
ENSPFOG00000006122	grsf1	99	64.320	ENSAPEG00000007240	-	99	62.774	Amphiprion_percula
ENSPFOG00000006122	grsf1	99	62.255	ENSATEG00000007185	grsf1	99	62.010	Anabas_testudineus
ENSPFOG00000006122	grsf1	99	62.621	ENSACLG00000003685	-	99	62.195	Astatotilapia_calliptera
ENSPFOG00000006122	grsf1	86	45.231	ENSAMXG00000012270	grsf1	98	45.231	Astyanax_mexicanus
ENSPFOG00000006122	grsf1	99	55.689	ENSCSEG00000019209	-	99	55.389	Cynoglossus_semilaevis
ENSPFOG00000006122	grsf1	99	71.429	ENSCVAG00000004476	grsf1	99	70.936	Cyprinodon_variegatus
ENSPFOG00000006122	grsf1	98	44.335	ENSDARG00000053021	grsf1	93	43.350	Danio_rerio
ENSPFOG00000006122	grsf1	99	59.223	ENSFHEG00000013358	-	99	59.223	Fundulus_heteroclitus
ENSPFOG00000006122	grsf1	76	72.727	ENSGMOG00000014047	grsf1	81	72.727	Gadus_morhua
ENSPFOG00000006122	grsf1	100	90.617	ENSGAFG00000004496	grsf1	100	90.617	Gambusia_affinis
ENSPFOG00000006122	grsf1	77	59.403	ENSGACG00000014447	grsf1	96	59.938	Gasterosteus_aculeatus
ENSPFOG00000006122	grsf1	99	62.044	ENSHBUG00000006284	grsf1	99	61.275	Haplochromis_burtoni
ENSPFOG00000006122	grsf1	99	55.448	ENSHCOG00000007715	-	99	55.802	Hippocampus_comes
ENSPFOG00000006122	grsf1	80	50.000	ENSIPUG00000010533	grsf1	80	50.000	Ictalurus_punctatus
ENSPFOG00000006122	grsf1	99	57.907	ENSKMAG00000004528	grsf1	99	57.907	Kryptolebias_marmoratus
ENSPFOG00000006122	grsf1	78	50.464	ENSLBEG00000018100	grsf1	98	50.464	Labrus_bergylta
ENSPFOG00000006122	grsf1	99	63.524	ENSMAMG00000002627	grsf1	99	62.255	Mastacembelus_armatus
ENSPFOG00000006122	grsf1	99	62.621	ENSMZEG00005020633	-	99	62.195	Maylandia_zebra
ENSPFOG00000006122	grsf1	95	60.789	ENSMMOG00000014231	grsf1	99	60.714	Mola_mola
ENSPFOG00000006122	grsf1	99	59.951	ENSMALG00000000251	grsf1	99	60.147	Monopterus_albus
ENSPFOG00000006122	grsf1	99	61.125	ENSNBRG00000017774	grsf1	96	60.688	Neolamprologus_brichardi
ENSPFOG00000006122	grsf1	99	62.864	ENSONIG00000014119	grsf1	99	62.683	Oreochromis_niloticus
ENSPFOG00000006122	grsf1	99	57.072	ENSORLG00000030211	grsf1	98	57.320	Oryzias_latipes
ENSPFOG00000006122	grsf1	87	62.216	ENSORLG00020014383	grsf1	87	62.216	Oryzias_latipes_hni
ENSPFOG00000006122	grsf1	87	61.364	ENSORLG00015006520	grsf1	88	61.648	Oryzias_latipes_hsok
ENSPFOG00000006122	grsf1	87	64.589	ENSOMEG00000009181	grsf1	99	60.401	Oryzias_melastigma
ENSPFOG00000006122	grsf1	83	52.381	ENSPKIG00000019432	grsf1	95	47.073	Paramormyrops_kingsleyae
ENSPFOG00000006122	grsf1	83	60.882	ENSPMGG00000013654	grsf1	93	59.710	Periophthalmus_magnuspinnatus
ENSPFOG00000006122	grsf1	100	98.765	ENSPLAG00000020977	grsf1	100	98.765	Poecilia_latipinna
ENSPFOG00000006122	grsf1	100	98.765	ENSPMEG00000012485	grsf1	100	98.765	Poecilia_mexicana
ENSPFOG00000006122	grsf1	100	96.552	ENSPREG00000013383	grsf1	100	96.552	Poecilia_reticulata
ENSPFOG00000006122	grsf1	99	62.864	ENSPNYG00000005379	grsf1	99	62.836	Pundamilia_nyererei
ENSPFOG00000006122	grsf1	89	48.767	ENSPNAG00000014912	grsf1	86	48.767	Pygocentrus_nattereri
ENSPFOG00000006122	grsf1	82	43.620	ENSSFOG00015014620	grsf1	83	43.620	Scleropages_formosus
ENSPFOG00000006122	grsf1	81	60.671	ENSSMAG00000014181	grsf1	70	60.671	Scophthalmus_maximus
ENSPFOG00000006122	grsf1	99	59.901	ENSSDUG00000009397	-	97	63.205	Seriola_dumerili
ENSPFOG00000006122	grsf1	99	59.259	ENSSLDG00000025494	grsf1	99	59.753	Seriola_lalandi_dorsalis
ENSPFOG00000006122	grsf1	99	62.774	ENSSPAG00000023296	grsf1	99	62.530	Stegastes_partitus
ENSPFOG00000006122	grsf1	97	56.784	ENSTRUG00000015354	grsf1	99	56.585	Takifugu_rubripes
ENSPFOG00000006122	grsf1	82	56.966	ENSTNIG00000015350	-	99	57.099	Tetraodon_nigroviridis
ENSPFOG00000006122	grsf1	99	88.861	ENSXMAG00000029710	grsf1	99	88.861	Xiphophorus_maculatus