EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPFOG00000006287 (Gene tree)
Gene ID: 103152954
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Poecilia_formosa
Status: putative
Strand: Plus strand
Length: 5332 bases
Position: chrKI519947.1:176481-181812
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPFOP00000006178	zf-C2H2	PF00096.26	2.1e-49	1	7
ENSPFOP00000006178	zf-C2H2	PF00096.26	2.1e-49	2	7
ENSPFOP00000006178	zf-C2H2	PF00096.26	2.1e-49	3	7
ENSPFOP00000006178	zf-C2H2	PF00096.26	2.1e-49	4	7
ENSPFOP00000006178	zf-C2H2	PF00096.26	2.1e-49	5	7
ENSPFOP00000006178	zf-C2H2	PF00096.26	2.1e-49	6	7
ENSPFOP00000006178	zf-C2H2	PF00096.26	2.1e-49	7	7
ENSPFOP00000026560	zf-C2H2	PF00096.26	4e-48	1	7
ENSPFOP00000026560	zf-C2H2	PF00096.26	4e-48	2	7
ENSPFOP00000026560	zf-C2H2	PF00096.26	4e-48	3	7
ENSPFOP00000026560	zf-C2H2	PF00096.26	4e-48	4	7
ENSPFOP00000026560	zf-C2H2	PF00096.26	4e-48	5	7
ENSPFOP00000026560	zf-C2H2	PF00096.26	4e-48	6	7
ENSPFOP00000026560	zf-C2H2	PF00096.26	4e-48	7	7
ENSPFOP00000006178	zf-met	PF12874.7	3.1e-17	1	4
ENSPFOP00000006178	zf-met	PF12874.7	3.1e-17	2	4
ENSPFOP00000006178	zf-met	PF12874.7	3.1e-17	3	4
ENSPFOP00000006178	zf-met	PF12874.7	3.1e-17	4	4
ENSPFOP00000026560	zf-met	PF12874.7	5.2e-16	1	4
ENSPFOP00000026560	zf-met	PF12874.7	5.2e-16	2	4
ENSPFOP00000026560	zf-met	PF12874.7	5.2e-16	3	4
ENSPFOP00000026560	zf-met	PF12874.7	5.2e-16	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPFOT00000026170	-	3291	-	ENSPFOP00000026560	835 (aa)	-	A0A096M569
ENSPFOT00000006188	-	3135	-	ENSPFOP00000006178	698 (aa)	-	A0A087XK75

Gene Model

Click here to download ENSPFOG00000006287's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000006287's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPFOG00000006287	-	74	39.243	ENSPFOG00000002879	-	100	39.243
ENSPFOG00000006287	-	72	36.702	ENSPFOG00000007684	-	96	36.702
ENSPFOG00000006287	-	74	36.605	ENSPFOG00000007333	-	91	35.476
ENSPFOG00000006287	-	67	43.089	ENSPFOG00000003366	-	83	33.821
ENSPFOG00000006287	-	77	32.188	ENSPFOG00000010474	-	98	33.333
ENSPFOG00000006287	-	71	36.800	ENSPFOG00000016324	-	60	33.978
ENSPFOG00000006287	-	80	40.090	ENSPFOG00000022055	-	60	40.090
ENSPFOG00000006287	-	81	37.339	ENSPFOG00000023590	-	74	37.339
ENSPFOG00000006287	-	73	40.764	ENSPFOG00000007833	-	99	40.678
ENSPFOG00000006287	-	96	35.682	ENSPFOG00000004894	-	99	39.400
ENSPFOG00000006287	-	79	37.222	ENSPFOG00000021800	-	90	37.222
ENSPFOG00000006287	-	69	41.860	ENSPFOG00000024567	-	100	41.860
ENSPFOG00000006287	-	67	38.250	ENSPFOG00000021850	-	88	38.250
ENSPFOG00000006287	-	71	38.926	ENSPFOG00000012629	-	100	38.926
ENSPFOG00000006287	-	67	41.121	ENSPFOG00000024593	-	90	41.121
ENSPFOG00000006287	-	93	32.722	ENSPFOG00000001375	-	100	36.673
ENSPFOG00000006287	-	91	40.000	ENSPFOG00000023528	-	99	37.822
ENSPFOG00000006287	-	66	41.011	ENSPFOG00000020691	-	95	40.625
ENSPFOG00000006287	-	68	38.824	ENSPFOG00000022488	-	73	41.810
ENSPFOG00000006287	-	63	40.854	ENSPFOG00000024748	-	76	38.820
ENSPFOG00000006287	-	71	37.883	ENSPFOG00000024239	-	78	39.612
ENSPFOG00000006287	-	74	47.692	ENSPFOG00000016866	-	100	45.326
ENSPFOG00000006287	-	74	39.024	ENSPFOG00000022426	-	100	39.024
ENSPFOG00000006287	-	67	37.826	ENSPFOG00000010113	-	55	37.826
ENSPFOG00000006287	-	73	34.884	ENSPFOG00000010114	-	85	34.677
ENSPFOG00000006287	-	67	35.048	ENSPFOG00000022913	-	76	35.048
ENSPFOG00000006287	-	70	35.106	ENSPFOG00000023968	-	68	35.106
ENSPFOG00000006287	-	72	34.774	ENSPFOG00000018860	-	100	35.829
ENSPFOG00000006287	-	70	40.741	ENSPFOG00000024469	-	87	40.741
ENSPFOG00000006287	-	67	31.818	ENSPFOG00000024288	-	79	31.562
ENSPFOG00000006287	-	79	37.584	ENSPFOG00000009483	-	99	37.584
ENSPFOG00000006287	-	75	35.915	ENSPFOG00000024581	-	69	35.915
ENSPFOG00000006287	-	67	40.758	ENSPFOG00000018245	-	98	39.896
ENSPFOG00000006287	-	69	39.169	ENSPFOG00000006147	-	100	39.169
ENSPFOG00000006287	-	66	38.298	ENSPFOG00000015360	-	51	34.167
ENSPFOG00000006287	-	67	40.625	ENSPFOG00000004358	-	100	40.625
ENSPFOG00000006287	-	81	38.931	ENSPFOG00000020393	-	90	38.931
ENSPFOG00000006287	-	67	38.786	ENSPFOG00000020392	-	77	38.786
ENSPFOG00000006287	-	81	40.557	ENSPFOG00000020390	-	77	38.905
ENSPFOG00000006287	-	69	39.726	ENSPFOG00000018462	-	97	39.726
ENSPFOG00000006287	-	82	38.989	ENSPFOG00000018784	-	99	41.370
ENSPFOG00000006287	-	63	40.977	ENSPFOG00000018782	-	61	40.977
ENSPFOG00000006287	-	71	38.542	ENSPFOG00000010422	-	95	38.542
ENSPFOG00000006287	-	74	41.463	ENSPFOG00000015553	-	88	41.463
ENSPFOG00000006287	-	70	31.530	ENSPFOG00000004826	-	99	31.880
ENSPFOG00000006287	-	76	39.224	ENSPFOG00000004616	-	99	39.224
ENSPFOG00000006287	-	83	30.105	ENSPFOG00000017913	-	100	33.747
ENSPFOG00000006287	-	67	37.452	ENSPFOG00000022095	-	99	37.356
ENSPFOG00000006287	-	70	40.591	ENSPFOG00000005449	-	99	40.591
ENSPFOG00000006287	-	73	36.721	ENSPFOG00000001760	-	78	36.721
ENSPFOG00000006287	-	67	44.444	ENSPFOG00000023671	-	62	41.739
ENSPFOG00000006287	-	70	40.722	ENSPFOG00000023670	-	99	40.827
ENSPFOG00000006287	-	67	34.746	ENSPFOG00000007708	-	99	34.746
ENSPFOG00000006287	-	68	38.265	ENSPFOG00000020109	-	78	38.265
ENSPFOG00000006287	-	77	33.002	ENSPFOG00000020182	ZNF319	90	33.588
ENSPFOG00000006287	-	67	37.971	ENSPFOG00000023165	-	70	37.218
ENSPFOG00000006287	-	82	37.339	ENSPFOG00000001053	-	100	38.004
ENSPFOG00000006287	-	72	37.687	ENSPFOG00000005463	-	99	37.687
ENSPFOG00000006287	-	69	38.202	ENSPFOG00000007465	-	100	38.202
ENSPFOG00000006287	-	85	37.556	ENSPFOG00000001339	-	100	41.040
ENSPFOG00000006287	-	84	40.164	ENSPFOG00000001275	-	100	40.685
ENSPFOG00000006287	-	71	36.129	ENSPFOG00000023483	-	100	37.101
ENSPFOG00000006287	-	77	32.841	ENSPFOG00000017353	znf710b	57	35.079
ENSPFOG00000006287	-	73	40.609	ENSPFOG00000009491	-	67	40.609
ENSPFOG00000006287	-	71	32.441	ENSPFOG00000006537	zbtb41	56	32.441
ENSPFOG00000006287	-	74	38.377	ENSPFOG00000017595	-	99	38.377
ENSPFOG00000006287	-	69	38.416	ENSPFOG00000023476	-	76	38.416
ENSPFOG00000006287	-	69	36.740	ENSPFOG00000015002	-	70	36.158
ENSPFOG00000006287	-	67	37.319	ENSPFOG00000002393	GZF1	59	37.319
ENSPFOG00000006287	-	67	43.293	ENSPFOG00000022286	-	99	38.333
ENSPFOG00000006287	-	85	33.333	ENSPFOG00000020197	znf319b	83	33.970
ENSPFOG00000006287	-	78	38.621	ENSPFOG00000009806	-	99	37.838
ENSPFOG00000006287	-	64	39.375	ENSPFOG00000012948	-	51	39.375
ENSPFOG00000006287	-	73	34.365	ENSPFOG00000024398	-	70	34.365
ENSPFOG00000006287	-	72	37.473	ENSPFOG00000018237	-	100	38.756
ENSPFOG00000006287	-	80	40.090	ENSPFOG00000022934	-	60	40.090
ENSPFOG00000006287	-	70	35.211	ENSPFOG00000022933	-	56	32.584
ENSPFOG00000006287	-	72	37.966	ENSPFOG00000024156	-	78	37.966
ENSPFOG00000006287	-	72	38.500	ENSPFOG00000007938	-	90	38.084
ENSPFOG00000006287	-	81	35.667	ENSPFOG00000024692	-	77	33.557
ENSPFOG00000006287	-	84	32.768	ENSPFOG00000023510	-	94	33.898
ENSPFOG00000006287	-	80	41.714	ENSPFOG00000018776	-	100	41.558
ENSPFOG00000006287	-	69	36.122	ENSPFOG00000002887	-	82	36.122
ENSPFOG00000006287	-	75	36.145	ENSPFOG00000005397	si:ch211-166g5.4	57	35.976
ENSPFOG00000006287	-	67	41.477	ENSPFOG00000024183	-	67	39.716
ENSPFOG00000006287	-	68	39.623	ENSPFOG00000022201	-	71	39.623
ENSPFOG00000006287	-	78	43.312	ENSPFOG00000022026	-	53	43.312
ENSPFOG00000006287	-	67	40.741	ENSPFOG00000022343	-	71	40.741
ENSPFOG00000006287	-	67	35.808	ENSPFOG00000004204	-	66	35.808
ENSPFOG00000006287	-	79	40.123	ENSPFOG00000023770	-	99	40.123
ENSPFOG00000006287	-	67	48.276	ENSPFOG00000000020	-	99	39.013
ENSPFOG00000006287	-	68	32.979	ENSPFOG00000018630	prdm5	73	32.979
ENSPFOG00000006287	-	67	40.125	ENSPFOG00000004377	-	56	44.186
ENSPFOG00000006287	-	69	39.576	ENSPFOG00000010682	-	99	37.008
ENSPFOG00000006287	-	72	35.714	ENSPFOG00000010018	-	100	35.714
ENSPFOG00000006287	-	74	36.854	ENSPFOG00000024635	-	78	36.574
ENSPFOG00000006287	-	78	36.057	ENSPFOG00000018774	-	93	40.267
ENSPFOG00000006287	-	67	39.024	ENSPFOG00000018771	-	75	35.354
ENSPFOG00000006287	-	77	42.446	ENSPFOG00000023266	-	56	42.446
ENSPFOG00000006287	-	68	38.265	ENSPFOG00000020455	-	78	38.265
ENSPFOG00000006287	-	68	41.748	ENSPFOG00000024204	-	67	41.748
ENSPFOG00000006287	-	67	36.449	ENSPFOG00000023187	-	69	36.449
ENSPFOG00000006287	-	71	40.625	ENSPFOG00000018583	-	73	40.625
ENSPFOG00000006287	-	67	42.953	ENSPFOG00000021869	-	100	33.103
ENSPFOG00000006287	-	72	36.769	ENSPFOG00000000407	-	68	36.769
ENSPFOG00000006287	-	68	38.049	ENSPFOG00000013455	-	95	37.958
ENSPFOG00000006287	-	70	39.777	ENSPFOG00000005592	-	100	39.777
ENSPFOG00000006287	-	69	38.994	ENSPFOG00000000667	-	62	38.909
ENSPFOG00000006287	-	70	37.121	ENSPFOG00000024048	-	92	37.121
ENSPFOG00000006287	-	70	40.960	ENSPFOG00000004414	-	100	40.960
ENSPFOG00000006287	-	80	41.146	ENSPFOG00000005528	-	70	41.146
ENSPFOG00000006287	-	81	40.496	ENSPFOG00000001310	-	90	40.496
ENSPFOG00000006287	-	69	34.677	ENSPFOG00000022162	-	85	32.208
ENSPFOG00000006287	-	71	39.541	ENSPFOG00000008666	-	99	35.768
ENSPFOG00000006287	-	72	33.652	ENSPFOG00000004805	znf668	84	33.652
ENSPFOG00000006287	-	85	44.853	ENSPFOG00000007728	-	100	39.372
ENSPFOG00000006287	-	80	41.259	ENSPFOG00000024254	-	64	41.259
ENSPFOG00000006287	-	70	38.494	ENSPFOG00000023156	-	85	38.494
ENSPFOG00000006287	-	75	36.039	ENSPFOG00000000624	-	100	38.901
ENSPFOG00000006287	-	68	39.623	ENSPFOG00000024085	-	71	39.623
ENSPFOG00000006287	-	67	37.500	ENSPFOG00000011209	-	76	41.270
ENSPFOG00000006287	-	77	40.084	ENSPFOG00000009473	-	100	40.084
ENSPFOG00000006287	-	67	37.736	ENSPFOG00000022423	-	89	37.736
ENSPFOG00000006287	-	74	36.667	ENSPFOG00000024470	-	83	36.810
ENSPFOG00000006287	-	68	39.086	ENSPFOG00000008638	-	55	39.086
ENSPFOG00000006287	-	67	39.667	ENSPFOG00000006782	-	83	39.667
ENSPFOG00000006287	-	68	35.311	ENSPFOG00000024305	-	68	35.311
ENSPFOG00000006287	-	92	34.286	ENSPFOG00000003377	-	99	36.052
ENSPFOG00000006287	-	76	37.218	ENSPFOG00000019832	-	54	36.667
ENSPFOG00000006287	-	72	37.231	ENSPFOG00000024622	-	98	38.154
ENSPFOG00000006287	-	79	40.346	ENSPFOG00000020449	-	100	40.447
ENSPFOG00000006287	-	68	42.614	ENSPFOG00000019617	-	54	42.614
ENSPFOG00000006287	-	72	50.000	ENSPFOG00000024512	-	74	50.000
ENSPFOG00000006287	-	69	38.284	ENSPFOG00000023732	-	87	35.522
ENSPFOG00000006287	-	67	39.303	ENSPFOG00000023737	-	79	34.347
ENSPFOG00000006287	-	67	32.051	ENSPFOG00000008241	si:dkey-89b17.4	76	32.051
ENSPFOG00000006287	-	81	36.916	ENSPFOG00000024133	-	77	36.916
ENSPFOG00000006287	-	76	38.369	ENSPFOG00000007919	-	100	39.857
ENSPFOG00000006287	-	69	39.597	ENSPFOG00000003460	gfi1b	50	39.597
ENSPFOG00000006287	-	67	42.424	ENSPFOG00000005288	-	51	42.424
ENSPFOG00000006287	-	67	35.948	ENSPFOG00000005289	-	99	32.192
ENSPFOG00000006287	-	73	38.951	ENSPFOG00000001144	-	100	38.951
ENSPFOG00000006287	-	77	38.208	ENSPFOG00000000774	-	77	37.452
ENSPFOG00000006287	-	81	42.857	ENSPFOG00000018580	-	99	40.548
ENSPFOG00000006287	-	68	45.536	ENSPFOG00000011766	-	100	45.536
ENSPFOG00000006287	-	87	42.754	ENSPFOG00000007847	-	99	39.757
ENSPFOG00000006287	-	69	40.541	ENSPFOG00000004126	-	99	39.106
ENSPFOG00000006287	-	83	38.679	ENSPFOG00000024642	-	100	41.463
ENSPFOG00000006287	-	70	31.450	ENSPFOG00000008519	-	99	30.000
ENSPFOG00000006287	-	82	38.235	ENSPFOG00000022634	-	87	38.235
ENSPFOG00000006287	-	78	37.240	ENSPFOG00000020112	-	97	37.240

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPFOG00000006287	-	99	65.363	ENSAPOG00000001563	-	97	69.781	Acanthochromis_polyacanthus
ENSPFOG00000006287	-	71	51.473	ENSACIG00000015411	-	88	66.331	Amphilophus_citrinellus
ENSPFOG00000006287	-	70	79.747	ENSAOCG00000013589	-	91	80.085	Amphiprion_ocellaris
ENSPFOG00000006287	-	96	57.174	ENSAOCG00000013505	-	90	59.649	Amphiprion_ocellaris
ENSPFOG00000006287	-	96	58.889	ENSAPEG00000022756	-	91	59.300	Amphiprion_percula
ENSPFOG00000006287	-	73	79.372	ENSAPEG00000022774	-	85	79.730	Amphiprion_percula
ENSPFOG00000006287	-	96	59.142	ENSATEG00000019284	-	85	58.537	Anabas_testudineus
ENSPFOG00000006287	-	67	80.357	ENSATEG00000019261	-	83	80.233	Anabas_testudineus
ENSPFOG00000006287	-	70	83.275	ENSACLG00000008606	-	91	83.275	Astatotilapia_calliptera
ENSPFOG00000006287	-	72	74.163	ENSACLG00000008624	-	90	74.163	Astatotilapia_calliptera
ENSPFOG00000006287	-	99	59.336	ENSCSEG00000008903	-	99	59.234	Cynoglossus_semilaevis
ENSPFOG00000006287	-	85	76.862	ENSCVAG00000016534	-	77	76.862	Cyprinodon_variegatus
ENSPFOG00000006287	-	74	61.299	ENSGMOG00000000494	-	98	61.299	Gadus_morhua
ENSPFOG00000006287	-	100	95.845	ENSGAFG00000002659	-	100	87.066	Gambusia_affinis
ENSPFOG00000006287	-	77	73.985	ENSGACG00000001377	-	97	73.985	Gasterosteus_aculeatus
ENSPFOG00000006287	-	71	69.141	ENSHBUG00000008502	-	92	69.141	Haplochromis_burtoni
ENSPFOG00000006287	-	99	61.777	ENSHCOG00000000511	-	94	70.732	Hippocampus_comes
ENSPFOG00000006287	-	83	72.022	ENSLBEG00000018509	-	100	72.022	Labrus_bergylta
ENSPFOG00000006287	-	99	64.477	ENSMAMG00000018137	-	94	63.878	Mastacembelus_armatus
ENSPFOG00000006287	-	70	70.518	ENSMZEG00005002583	-	89	70.518	Maylandia_zebra
ENSPFOG00000006287	-	74	60.481	ENSMMOG00000009733	-	83	70.934	Mola_mola
ENSPFOG00000006287	-	65	58.824	ENSMALG00000019991	-	96	56.126	Monopterus_albus
ENSPFOG00000006287	-	68	83.162	ENSNBRG00000008223	-	82	83.162	Neolamprologus_brichardi
ENSPFOG00000006287	-	73	81.144	ENSONIG00000017233	-	99	81.144	Oreochromis_niloticus
ENSPFOG00000006287	-	67	75.314	ENSOMEG00000016463	-	80	72.830	Oryzias_melastigma
ENSPFOG00000006287	-	67	48.636	ENSPMGG00000002384	-	88	35.192	Periophthalmus_magnuspinnatus
ENSPFOG00000006287	-	96	98.039	ENSPLAG00000003412	-	99	100.000	Poecilia_latipinna
ENSPFOG00000006287	-	100	100.000	ENSPMEG00000005897	-	96	96.717	Poecilia_mexicana
ENSPFOG00000006287	-	73	89.567	ENSPREG00000021246	-	99	92.717	Poecilia_reticulata
ENSPFOG00000006287	-	67	81.667	ENSPNYG00000023088	-	92	69.531	Pundamilia_nyererei
ENSPFOG00000006287	-	100	64.005	ENSSDUG00000004892	-	95	63.212	Seriola_dumerili
ENSPFOG00000006287	-	70	76.421	ENSSLDG00000005670	-	94	76.421	Seriola_lalandi_dorsalis
ENSPFOG00000006287	-	91	77.982	ENSSPAG00000022219	-	92	77.982	Stegastes_partitus
ENSPFOG00000006287	-	76	77.234	ENSTNIG00000011188	-	98	77.234	Tetraodon_nigroviridis
ENSPFOG00000006287	-	100	94.986	ENSXMAG00000000866	-	100	86.358	Xiphophorus_maculatus