EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPFOG00000006437 (Gene tree)
Gene ID: -
Gene Symbol: srsf6a
Alias: -
Full Name: serine/arginine-rich splicing factor 6a
Gene Type: protein_coding
Species: Poecilia_formosa
Status: putative
Strand: Minus strand
Length: 9513 bases
Position: chrKI520071.1:216565-226077
Accession: ZDB-GENE-040426-2824
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPFOP00000030141	RRM_1	PF00076.22	2.3e-40	1	3
ENSPFOP00000030141	RRM_1	PF00076.22	2.3e-40	2	3
ENSPFOP00000030141	RRM_1	PF00076.22	2.3e-40	3	3
ENSPFOP00000006405	RRM_1	PF00076.22	1.6e-31	1	2
ENSPFOP00000006405	RRM_1	PF00076.22	1.6e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPFOT00000023233	-	2161	-	ENSPFOP00000030141	640 (aa)	-	A0A096MFF0
ENSPFOT00000006416	-	2700	-	ENSPFOP00000006405	381 (aa)	-	A0A087XKV2

Gene Model

Click here to download ENSPFOG00000006437's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000006437's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPFOG00000006437	srsf6a	60	60.345	ENSPFOG00000017700	srsf5b	60	69.091
ENSPFOG00000006437	srsf6a	54	38.532	ENSPFOG00000009640	-	81	39.908
ENSPFOG00000006437	srsf6a	54	37.915	ENSPFOG00000018325	-	70	38.389

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPFOG00000006437	srsf6a	50	83.158	ENSG00000124193	SRSF6	58	92.308	Homo_sapiens
ENSPFOG00000006437	srsf6a	71	82.143	ENSAPOG00000000810	srsf6a	92	80.889	Acanthochromis_polyacanthus
ENSPFOG00000006437	srsf6a	50	65.816	ENSAMEG00000003710	SRSF6	53	87.931	Ailuropoda_melanoleuca
ENSPFOG00000006437	srsf6a	93	73.239	ENSACIG00000023658	-	91	81.915	Amphilophus_citrinellus
ENSPFOG00000006437	srsf6a	74	62.989	ENSACIG00000020091	-	95	78.947	Amphilophus_citrinellus
ENSPFOG00000006437	srsf6a	69	65.779	ENSAOCG00000004309	-	57	87.931	Amphiprion_ocellaris
ENSPFOG00000006437	srsf6a	71	84.821	ENSAOCG00000019410	-	91	86.607	Amphiprion_ocellaris
ENSPFOG00000006437	srsf6a	53	79.487	ENSAPEG00000020746	-	65	84.483	Amphiprion_percula
ENSPFOG00000006437	srsf6a	71	79.913	ENSAPEG00000013086	-	91	98.148	Amphiprion_percula
ENSPFOG00000006437	srsf6a	50	84.656	ENSACAG00000002061	SRSF6	52	91.379	Anolis_carolinensis
ENSPFOG00000006437	srsf6a	50	83.158	ENSANAG00000024080	SRSF6	58	92.308	Aotus_nancymaae
ENSPFOG00000006437	srsf6a	91	66.947	ENSAMXG00000042692	-	96	87.407	Astyanax_mexicanus
ENSPFOG00000006437	srsf6a	50	83.158	ENSBTAG00000008527	SRSF6	58	93.590	Bos_taurus
ENSPFOG00000006437	srsf6a	50	83.158	ENSCJAG00000048403	SRSF6	68	87.931	Callithrix_jacchus
ENSPFOG00000006437	srsf6a	50	83.158	ENSCAFG00000009289	SRSF6	58	93.590	Canis_familiaris
ENSPFOG00000006437	srsf6a	50	83.158	ENSCAFG00020013559	SRSF6	58	93.590	Canis_lupus_dingo
ENSPFOG00000006437	srsf6a	50	83.158	ENSCHIG00000015890	-	58	93.590	Capra_hircus
ENSPFOG00000006437	srsf6a	50	82.105	ENSCHIG00000009148	-	53	87.931	Capra_hircus
ENSPFOG00000006437	srsf6a	50	77.895	ENSCPOG00000011761	SRSF6	58	92.308	Cavia_porcellus
ENSPFOG00000006437	srsf6a	50	75.916	ENSCCAG00000018540	-	60	82.759	Cebus_capucinus
ENSPFOG00000006437	srsf6a	50	83.158	ENSCCAG00000026018	-	58	92.308	Cebus_capucinus
ENSPFOG00000006437	srsf6a	50	83.158	ENSCATG00000030794	SRSF6	58	92.308	Cercocebus_atys
ENSPFOG00000006437	srsf6a	50	83.158	ENSCLAG00000010247	SRSF6	58	92.308	Chinchilla_lanigera
ENSPFOG00000006437	srsf6a	50	83.158	ENSCSAG00000014022	SRSF6	53	87.931	Chlorocebus_sabaeus
ENSPFOG00000006437	srsf6a	55	86.441	ENSCANG00000037774	-	53	86.207	Colobus_angolensis_palliatus
ENSPFOG00000006437	srsf6a	50	83.158	ENSCGRG00001022339	Srsf6	58	92.308	Cricetulus_griseus_chok1gshd
ENSPFOG00000006437	srsf6a	71	75.664	ENSCSEG00000019782	SRSF6	91	96.296	Cynoglossus_semilaevis
ENSPFOG00000006437	srsf6a	50	89.947	ENSDARG00000016783	srsf6b	82	94.872	Danio_rerio
ENSPFOG00000006437	srsf6a	50	83.158	ENSDNOG00000008410	SRSF6	53	87.931	Dasypus_novemcinctus
ENSPFOG00000006437	srsf6a	50	83.158	ENSDORG00000028378	Srsf6	58	92.308	Dipodomys_ordii
ENSPFOG00000006437	srsf6a	50	81.053	ENSETEG00000006221	SRSF6	53	86.207	Echinops_telfairi
ENSPFOG00000006437	srsf6a	50	83.158	ENSEASG00005023429	SRSF6	53	87.931	Equus_asinus_asinus
ENSPFOG00000006437	srsf6a	50	83.158	ENSECAG00000023932	SRSF6	56	87.931	Equus_caballus
ENSPFOG00000006437	srsf6a	50	83.158	ENSFCAG00000032814	SRSF6	53	87.931	Felis_catus
ENSPFOG00000006437	srsf6a	93	85.366	ENSFHEG00000023065	srsf6a	97	81.081	Fundulus_heteroclitus
ENSPFOG00000006437	srsf6a	50	85.714	ENSGALG00000000990	SRSF6	58	94.872	Gallus_gallus
ENSPFOG00000006437	srsf6a	77	97.561	ENSGAFG00000019087	srsf6a	100	97.967	Gambusia_affinis
ENSPFOG00000006437	srsf6a	100	68.558	ENSGACG00000006084	srsf6a	53	89.655	Gasterosteus_aculeatus
ENSPFOG00000006437	srsf6a	50	83.158	ENSGGOG00000009808	SRSF6	58	92.308	Gorilla_gorilla
ENSPFOG00000006437	srsf6a	59	74.370	ENSHBUG00000006386	-	57	81.481	Haplochromis_burtoni
ENSPFOG00000006437	srsf6a	52	66.332	ENSHGLG00000007701	-	57	77.586	Heterocephalus_glaber_female
ENSPFOG00000006437	srsf6a	50	83.158	ENSHGLG00000007348	SRSF6	58	92.308	Heterocephalus_glaber_female
ENSPFOG00000006437	srsf6a	92	68.946	ENSHCOG00000002740	srsf6a	77	93.103	Hippocampus_comes
ENSPFOG00000006437	srsf6a	50	84.211	ENSIPUG00000004776	-	81	93.103	Ictalurus_punctatus
ENSPFOG00000006437	srsf6a	50	83.158	ENSSTOG00000010866	SRSF6	58	92.308	Ictidomys_tridecemlineatus
ENSPFOG00000006437	srsf6a	92	81.967	ENSKMAG00000011934	srsf6a	91	90.179	Kryptolebias_marmoratus
ENSPFOG00000006437	srsf6a	92	70.621	ENSLBEG00000007356	srsf6a	51	92.982	Labrus_bergylta
ENSPFOG00000006437	srsf6a	91	67.241	ENSLACG00000005466	SRSF6	69	86.207	Latimeria_chalumnae
ENSPFOG00000006437	srsf6a	50	83.158	ENSMFAG00000036925	SRSF6	58	92.308	Macaca_fascicularis
ENSPFOG00000006437	srsf6a	50	83.158	ENSMMUG00000006742	SRSF6	58	92.308	Macaca_mulatta
ENSPFOG00000006437	srsf6a	50	82.632	ENSMNEG00000027392	-	58	91.026	Macaca_nemestrina
ENSPFOG00000006437	srsf6a	50	82.632	ENSMNEG00000038270	-	53	87.931	Macaca_nemestrina
ENSPFOG00000006437	srsf6a	93	85.882	ENSMAMG00000017161	srsf6a	73	94.828	Mastacembelus_armatus
ENSPFOG00000006437	srsf6a	69	68.045	ENSMZEG00005008032	-	57	87.931	Maylandia_zebra
ENSPFOG00000006437	srsf6a	50	82.632	ENSMICG00000008537	SRSF6	58	92.308	Microcebus_murinus
ENSPFOG00000006437	srsf6a	50	85.263	ENSMODG00000003107	SRSF6	54	85.326	Monodelphis_domestica
ENSPFOG00000006437	srsf6a	76	81.720	ENSMALG00000003702	srsf6a	94	83.200	Monopterus_albus
ENSPFOG00000006437	srsf6a	50	83.158	MGP_CAROLIEiJ_G0024606	Srsf6	58	92.308	Mus_caroli
ENSPFOG00000006437	srsf6a	50	83.158	ENSMUSG00000016921	Srsf6	58	92.308	Mus_musculus
ENSPFOG00000006437	srsf6a	50	83.158	MGP_PahariEiJ_G0026050	Srsf6	58	92.308	Mus_pahari
ENSPFOG00000006437	srsf6a	50	83.158	MGP_SPRETEiJ_G0025528	Srsf6	58	92.308	Mus_spretus
ENSPFOG00000006437	srsf6a	50	83.158	ENSMPUG00000017692	SRSF6	64	87.931	Mustela_putorius_furo
ENSPFOG00000006437	srsf6a	50	58.065	ENSMLUG00000016618	SRSF6	53	87.719	Myotis_lucifugus
ENSPFOG00000006437	srsf6a	50	83.158	ENSNGAG00000017560	Srsf6	58	92.308	Nannospalax_galili
ENSPFOG00000006437	srsf6a	50	80.952	ENSNBRG00000014709	-	57	87.931	Neolamprologus_brichardi
ENSPFOG00000006437	srsf6a	50	83.158	ENSNLEG00000006524	SRSF6	58	92.308	Nomascus_leucogenys
ENSPFOG00000006437	srsf6a	50	85.263	ENSMEUG00000014615	SRSF6	61	87.931	Notamacropus_eugenii
ENSPFOG00000006437	srsf6a	69	75.746	ENSONIG00000020247	-	53	87.931	Oreochromis_niloticus
ENSPFOG00000006437	srsf6a	50	66.497	ENSOCUG00000009785	-	63	87.931	Oryctolagus_cuniculus
ENSPFOG00000006437	srsf6a	50	76.963	ENSORLG00000003530	srsf6a	92	94.444	Oryzias_latipes
ENSPFOG00000006437	srsf6a	50	76.440	ENSORLG00015009410	srsf6a	92	94.444	Oryzias_latipes_hsok
ENSPFOG00000006437	srsf6a	50	82.632	ENSOGAG00000014468	SRSF6	53	86.207	Otolemur_garnettii
ENSPFOG00000006437	srsf6a	50	80.208	ENSOARG00000003117	SRSF6	53	87.931	Ovis_aries
ENSPFOG00000006437	srsf6a	50	82.632	ENSPPAG00000034327	-	53	87.931	Pan_paniscus
ENSPFOG00000006437	srsf6a	50	70.526	ENSPPAG00000043131	-	57	74.302	Pan_paniscus
ENSPFOG00000006437	srsf6a	50	83.158	ENSPPRG00000008917	SRSF6	53	87.931	Panthera_pardus
ENSPFOG00000006437	srsf6a	50	70.526	ENSPTRG00000046274	-	57	74.302	Pan_troglodytes
ENSPFOG00000006437	srsf6a	50	83.158	ENSPTRG00000044686	-	58	92.308	Pan_troglodytes
ENSPFOG00000006437	srsf6a	50	83.158	ENSPANG00000035224	SRSF6	58	92.308	Papio_anubis
ENSPFOG00000006437	srsf6a	94	76.923	ENSPKIG00000018463	-	86	93.103	Paramormyrops_kingsleyae
ENSPFOG00000006437	srsf6a	50	85.263	ENSPCIG00000003820	SRSF6	58	94.872	Phascolarctos_cinereus
ENSPFOG00000006437	srsf6a	97	96.414	ENSPLAG00000009243	srsf6a	99	96.414	Poecilia_latipinna
ENSPFOG00000006437	srsf6a	90	100.000	ENSPMEG00000006042	SRSF6	100	89.764	Poecilia_mexicana
ENSPFOG00000006437	srsf6a	50	83.158	ENSPPYG00000011019	SRSF6	53	87.931	Pongo_abelii
ENSPFOG00000006437	srsf6a	52	66.667	ENSPCAG00000010954	SRSF6	55	86.207	Procavia_capensis
ENSPFOG00000006437	srsf6a	50	82.632	ENSPCOG00000026364	SRSF6	58	92.308	Propithecus_coquereli
ENSPFOG00000006437	srsf6a	50	83.684	ENSPVAG00000015232	SRSF6	53	87.719	Pteropus_vampyrus
ENSPFOG00000006437	srsf6a	50	80.952	ENSPNYG00000004944	-	57	87.931	Pundamilia_nyererei
ENSPFOG00000006437	srsf6a	50	83.158	ENSRNOG00000006380	Srsf6	60	85.246	Rattus_norvegicus
ENSPFOG00000006437	srsf6a	50	82.105	ENSRBIG00000041414	SRSF6	60	92.308	Rhinopithecus_bieti
ENSPFOG00000006437	srsf6a	50	83.158	ENSRROG00000029989	SRSF6	58	92.308	Rhinopithecus_roxellana
ENSPFOG00000006437	srsf6a	50	83.158	ENSSBOG00000033708	-	58	92.308	Saimiri_boliviensis_boliviensis
ENSPFOG00000006437	srsf6a	50	85.263	ENSSHAG00000012805	SRSF6	54	85.326	Sarcophilus_harrisii
ENSPFOG00000006437	srsf6a	95	70.940	ENSSFOG00015019681	-	53	91.228	Scleropages_formosus
ENSPFOG00000006437	srsf6a	65	91.667	ENSSMAG00000014819	-	71	96.386	Scophthalmus_maximus
ENSPFOG00000006437	srsf6a	90	82.051	ENSSDUG00000016097	srsf6a	92	94.828	Seriola_dumerili
ENSPFOG00000006437	srsf6a	94	74.373	ENSSLDG00000022841	srsf6a	94	74.857	Seriola_lalandi_dorsalis
ENSPFOG00000006437	srsf6a	50	85.714	ENSSPUG00000004967	SRSF6	58	94.872	Sphenodon_punctatus
ENSPFOG00000006437	srsf6a	65	95.187	ENSSPAG00000002362	srsf6a	86	94.828	Stegastes_partitus
ENSPFOG00000006437	srsf6a	50	83.158	ENSSSCG00000007362	SRSF6	61	87.931	Sus_scrofa
ENSPFOG00000006437	srsf6a	50	85.714	ENSTGUG00000003455	SRSF6	53	85.938	Taeniopygia_guttata
ENSPFOG00000006437	srsf6a	68	66.761	ENSTNIG00000001692	srsf6a	56	90.476	Tetraodon_nigroviridis
ENSPFOG00000006437	srsf6a	50	83.158	ENSUAMG00000003559	SRSF6	58	93.590	Ursus_americanus
ENSPFOG00000006437	srsf6a	77	97.154	ENSXMAG00000021849	srsf6a	100	97.561	Xiphophorus_maculatus