EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPFOG00000006990 (Gene tree)
Gene ID: 103146503
Gene Symbol: cpsf6
Alias: -
Full Name: cleavage and polyadenylation specific factor 6
Gene Type: protein_coding
Species: Poecilia_formosa
Status: putative
Strand: Minus strand
Length: 16092 bases
Position: chrKI519769.1:1025686-1041777
Accession: 103146503
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPFOP00000021269	RRM_1	PF00076.22	2.6e-07	1	1
ENSPFOP00000006964	RRM_1	PF00076.22	2.9e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPFOT00000026605	-	1561	-	ENSPFOP00000021269	476 (aa)	-	A0A096LQ28
ENSPFOT00000006976	-	1537	XM_016677626	ENSPFOP00000006964	468 (aa)	XP_016533112	A0A087XMG1
ENSPFOT00000023808	-	5079	-	ENSPFOP00000024110	358 (aa)	-	A0A096LY69

Gene Model

Click here to download ENSPFOG00000006990's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000006990's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPFOG00000006990	cpsf6	95	45.912	ENSG00000149532	CPSF7	100	55.128	Homo_sapiens
ENSPFOG00000006990	cpsf6	53	81.853	ENSG00000111605	CPSF6	88	79.787	Homo_sapiens
ENSPFOG00000006990	cpsf6	53	81.853	ENSAMEG00000011781	CPSF6	77	85.789	Ailuropoda_melanoleuca
ENSPFOG00000006990	cpsf6	74	95.161	ENSACIG00000018413	cpsf6	77	92.121	Amphilophus_citrinellus
ENSPFOG00000006990	cpsf6	53	81.853	ENSANAG00000019240	CPSF6	76	84.302	Aotus_nancymaae
ENSPFOG00000006990	cpsf6	50	89.316	ENSAMXG00000016745	CPSF6	51	73.077	Astyanax_mexicanus
ENSPFOG00000006990	cpsf6	53	81.853	ENSBTAG00000007323	CPSF6	83	85.263	Bos_taurus
ENSPFOG00000006990	cpsf6	93	79.912	ENSCJAG00000001798	CPSF6	94	82.000	Callithrix_jacchus
ENSPFOG00000006990	cpsf6	95	45.912	ENSCJAG00000019282	CPSF7	95	55.414	Callithrix_jacchus
ENSPFOG00000006990	cpsf6	53	81.853	ENSCAFG00000000424	CPSF6	77	84.795	Canis_familiaris
ENSPFOG00000006990	cpsf6	53	81.853	ENSCAFG00020016950	CPSF6	77	85.263	Canis_lupus_dingo
ENSPFOG00000006990	cpsf6	53	81.853	ENSCHIG00000010792	CPSF6	83	85.263	Capra_hircus
ENSPFOG00000006990	cpsf6	89	84.884	ENSTSYG00000008591	CPSF6	93	81.524	Carlito_syrichta
ENSPFOG00000006990	cpsf6	53	81.467	ENSCPOG00000015201	CPSF6	83	85.263	Cavia_porcellus
ENSPFOG00000006990	cpsf6	53	80.385	ENSCCAG00000028149	CPSF6	77	85.263	Cebus_capucinus
ENSPFOG00000006990	cpsf6	53	81.853	ENSCATG00000039288	CPSF6	82	85.263	Cercocebus_atys
ENSPFOG00000006990	cpsf6	53	81.467	ENSCLAG00000010149	CPSF6	82	84.706	Chinchilla_lanigera
ENSPFOG00000006990	cpsf6	53	81.853	ENSCSAG00000004232	CPSF6	77	85.263	Chlorocebus_sabaeus
ENSPFOG00000006990	cpsf6	53	81.853	ENSCANG00000037294	CPSF6	82	84.706	Colobus_angolensis_palliatus
ENSPFOG00000006990	cpsf6	53	81.853	ENSCGRG00001018082	Cpsf6	77	85.263	Cricetulus_griseus_chok1gshd
ENSPFOG00000006990	cpsf6	53	81.853	ENSCGRG00000016909	Cpsf6	82	84.706	Cricetulus_griseus_crigri
ENSPFOG00000006990	cpsf6	93	94.819	ENSCSEG00000008967	cpsf6	87	94.819	Cynoglossus_semilaevis
ENSPFOG00000006990	cpsf6	69	33.333	ENSCSEG00000001956	CPSF7	67	43.972	Cynoglossus_semilaevis
ENSPFOG00000006990	cpsf6	100	95.254	ENSCVAG00000014857	cpsf6	93	88.764	Cyprinodon_variegatus
ENSPFOG00000006990	cpsf6	95	45.267	ENSDNOG00000018517	CPSF7	95	56.051	Dasypus_novemcinctus
ENSPFOG00000006990	cpsf6	53	81.853	ENSDORG00000002950	Cpsf6	82	84.706	Dipodomys_ordii
ENSPFOG00000006990	cpsf6	86	41.770	FBgn0035872	CG7185	50	61.947	Drosophila_melanogaster
ENSPFOG00000006990	cpsf6	53	81.853	ENSEASG00005008066	CPSF6	77	85.263	Equus_asinus_asinus
ENSPFOG00000006990	cpsf6	79	56.618	ENSECAG00000018521	CPSF7	95	56.051	Equus_caballus
ENSPFOG00000006990	cpsf6	53	81.853	ENSECAG00000015988	CPSF6	77	85.263	Equus_caballus
ENSPFOG00000006990	cpsf6	57	61.017	ENSEEUG00000005966	-	67	60.684	Erinaceus_europaeus
ENSPFOG00000006990	cpsf6	53	81.853	ENSEEUG00000015039	CPSF6	82	84.118	Erinaceus_europaeus
ENSPFOG00000006990	cpsf6	53	81.853	ENSFCAG00000002855	CPSF6	77	85.263	Felis_catus
ENSPFOG00000006990	cpsf6	95	45.267	ENSFCAG00000013677	CPSF7	95	56.051	Felis_catus
ENSPFOG00000006990	cpsf6	95	41.929	ENSFALG00000011927	CPSF7	85	54.190	Ficedula_albicollis
ENSPFOG00000006990	cpsf6	53	81.467	ENSFDAG00000002281	CPSF6	51	74.582	Fukomys_damarensis
ENSPFOG00000006990	cpsf6	57	86.486	ENSFHEG00000019693	cpsf6	51	95.946	Fundulus_heteroclitus
ENSPFOG00000006990	cpsf6	62	95.000	ENSGMOG00000012951	cpsf6	53	95.000	Gadus_morhua
ENSPFOG00000006990	cpsf6	53	80.385	ENSGGOG00000008211	CPSF6	77	85.263	Gorilla_gorilla
ENSPFOG00000006990	cpsf6	53	81.467	ENSHGLG00000000792	CPSF6	51	74.582	Heterocephalus_glaber_female
ENSPFOG00000006990	cpsf6	53	81.467	ENSHGLG00100013861	CPSF6	52	74.582	Heterocephalus_glaber_male
ENSPFOG00000006990	cpsf6	91	93.200	ENSHCOG00000014555	cpsf6	83	93.229	Hippocampus_comes
ENSPFOG00000006990	cpsf6	53	81.853	ENSSTOG00000014133	CPSF6	76	83.815	Ictidomys_tridecemlineatus
ENSPFOG00000006990	cpsf6	53	81.853	ENSJJAG00000014647	Cpsf6	82	84.706	Jaculus_jaculus
ENSPFOG00000006990	cpsf6	57	95.896	ENSKMAG00000014794	cpsf6	94	89.313	Kryptolebias_marmoratus
ENSPFOG00000006990	cpsf6	75	90.052	ENSLOCG00000016190	cpsf6	61	90.052	Lepisosteus_oculatus
ENSPFOG00000006990	cpsf6	53	80.385	ENSMFAG00000045318	CPSF6	77	85.263	Macaca_fascicularis
ENSPFOG00000006990	cpsf6	53	80.385	ENSMMUG00000002921	CPSF6	77	85.263	Macaca_mulatta
ENSPFOG00000006990	cpsf6	93	79.425	ENSMNEG00000036311	CPSF6	93	81.737	Macaca_nemestrina
ENSPFOG00000006990	cpsf6	71	84.884	ENSMLEG00000003957	CPSF6	82	84.706	Mandrillus_leucophaeus
ENSPFOG00000006990	cpsf6	91	94.595	ENSMAMG00000010385	cpsf6	83	94.271	Mastacembelus_armatus
ENSPFOG00000006990	cpsf6	60	92.553	ENSMZEG00005007975	cpsf6	50	82.653	Maylandia_zebra
ENSPFOG00000006990	cpsf6	95	42.831	ENSMGAG00000004876	CPSF7	62	58.235	Meleagris_gallopavo
ENSPFOG00000006990	cpsf6	53	81.853	ENSMAUG00000013240	Cpsf6	77	85.263	Mesocricetus_auratus
ENSPFOG00000006990	cpsf6	93	79.425	ENSMICG00000007385	-	93	81.737	Microcebus_murinus
ENSPFOG00000006990	cpsf6	53	81.853	ENSMOCG00000013982	Cpsf6	77	85.263	Microtus_ochrogaster
ENSPFOG00000006990	cpsf6	79	94.595	ENSMALG00000014908	cpsf6	71	94.271	Monopterus_albus
ENSPFOG00000006990	cpsf6	53	81.853	MGP_CAROLIEiJ_G0015834	Cpsf6	77	85.263	Mus_caroli
ENSPFOG00000006990	cpsf6	93	84.375	ENSMUSG00000055531	Cpsf6	78	83.938	Mus_musculus
ENSPFOG00000006990	cpsf6	75	85.263	MGP_PahariEiJ_G0031253	Cpsf6	82	85.263	Mus_pahari
ENSPFOG00000006990	cpsf6	93	84.375	MGP_SPRETEiJ_G0016657	Cpsf6	78	83.938	Mus_spretus
ENSPFOG00000006990	cpsf6	95	65.188	ENSMLUG00000028728	-	50	78.744	Myotis_lucifugus
ENSPFOG00000006990	cpsf6	53	81.853	ENSNGAG00000015901	Cpsf6	77	85.263	Nannospalax_galili
ENSPFOG00000006990	cpsf6	93	85.263	ENSNLEG00000003798	CPSF6	93	81.737	Nomascus_leucogenys
ENSPFOG00000006990	cpsf6	89	84.706	ENSOPRG00000005199	CPSF6	82	84.706	Ochotona_princeps
ENSPFOG00000006990	cpsf6	92	95.135	ENSONIG00000011702	cpsf6	87	94.792	Oreochromis_niloticus
ENSPFOG00000006990	cpsf6	95	44.856	ENSOCUG00000024726	CPSF7	65	50.811	Oryctolagus_cuniculus
ENSPFOG00000006990	cpsf6	53	81.853	ENSOCUG00000013505	CPSF6	77	85.263	Oryctolagus_cuniculus
ENSPFOG00000006990	cpsf6	53	81.853	ENSOARG00000020532	CPSF6	82	84.884	Ovis_aries
ENSPFOG00000006990	cpsf6	75	53.571	ENSOARG00000012937	CPSF7	64	50.811	Ovis_aries
ENSPFOG00000006990	cpsf6	53	81.853	ENSPPRG00000021620	CPSF6	77	85.263	Panthera_pardus
ENSPFOG00000006990	cpsf6	99	41.386	ENSPPRG00000008538	CPSF7	71	51.351	Panthera_pardus
ENSPFOG00000006990	cpsf6	53	81.853	ENSPTIG00000004079	CPSF6	81	84.058	Panthera_tigris_altaica
ENSPFOG00000006990	cpsf6	53	80.385	ENSPTRG00000005205	CPSF6	77	85.263	Pan_troglodytes
ENSPFOG00000006990	cpsf6	75	85.263	ENSPANG00000011641	CPSF6	77	85.263	Papio_anubis
ENSPFOG00000006990	cpsf6	53	81.467	ENSPEMG00000007973	Cpsf6	82	84.706	Peromyscus_maniculatus_bairdii
ENSPFOG00000006990	cpsf6	71	71.006	ENSPMAG00000000657	cpsf6	57	80.769	Petromyzon_marinus
ENSPFOG00000006990	cpsf6	74	60.163	ENSPCIG00000002551	CPSF7	85	66.387	Phascolarctos_cinereus
ENSPFOG00000006990	cpsf6	53	81.853	ENSPCIG00000019063	CPSF6	77	84.737	Phascolarctos_cinereus
ENSPFOG00000006990	cpsf6	99	100.000	ENSPLAG00000005715	cpsf6	89	99.482	Poecilia_latipinna
ENSPFOG00000006990	cpsf6	99	100.000	ENSPMEG00000001353	cpsf6	89	99.482	Poecilia_mexicana
ENSPFOG00000006990	cpsf6	99	100.000	ENSPREG00000004417	cpsf6	82	100.000	Poecilia_reticulata
ENSPFOG00000006990	cpsf6	53	81.853	ENSPCAG00000011574	CPSF6	77	85.263	Procavia_capensis
ENSPFOG00000006990	cpsf6	53	80.385	ENSPCOG00000024384	CPSF6	77	85.263	Propithecus_coquereli
ENSPFOG00000006990	cpsf6	60	92.553	ENSPNYG00000020315	cpsf6	50	82.653	Pundamilia_nyererei
ENSPFOG00000006990	cpsf6	53	80.385	ENSRBIG00000042827	CPSF6	83	85.263	Rhinopithecus_bieti
ENSPFOG00000006990	cpsf6	95	45.912	ENSRBIG00000031429	CPSF7	95	55.414	Rhinopithecus_bieti
ENSPFOG00000006990	cpsf6	93	79.425	ENSRROG00000042758	CPSF6	93	81.737	Rhinopithecus_roxellana
ENSPFOG00000006990	cpsf6	53	81.853	ENSSBOG00000010652	CPSF6	81	84.058	Saimiri_boliviensis_boliviensis
ENSPFOG00000006990	cpsf6	57	90.672	ENSSDUG00000005024	cpsf6	87	95.312	Seriola_dumerili
ENSPFOG00000006990	cpsf6	57	90.672	ENSSLDG00000009042	cpsf6	87	95.312	Seriola_lalandi_dorsalis
ENSPFOG00000006990	cpsf6	93	83.158	ENSSARG00000006743	CPSF6	75	84.252	Sorex_araneus
ENSPFOG00000006990	cpsf6	60	93.262	ENSSPAG00000013906	cpsf6	77	93.939	Stegastes_partitus
ENSPFOG00000006990	cpsf6	53	81.853	ENSSSCG00000038031	CPSF6	81	84.058	Sus_scrofa
ENSPFOG00000006990	cpsf6	95	45.267	ENSSSCG00000013083	CPSF7	95	56.051	Sus_scrofa
ENSPFOG00000006990	cpsf6	53	81.853	ENSUMAG00000020779	CPSF6	81	84.058	Ursus_maritimus
ENSPFOG00000006990	cpsf6	53	81.853	ENSVPAG00000008469	CPSF6	82	84.706	Vicugna_pacos
ENSPFOG00000006990	cpsf6	53	81.853	ENSVVUG00000010156	-	81	84.058	Vulpes_vulpes
ENSPFOG00000006990	cpsf6	95	45.267	ENSVVUG00000004939	CPSF7	95	56.051	Vulpes_vulpes
ENSPFOG00000006990	cpsf6	74	52.174	ENSXETG00000006715	cpsf7	65	47.191	Xenopus_tropicalis
ENSPFOG00000006990	cpsf6	99	100.000	ENSXCOG00000013423	cpsf6	89	99.482	Xiphophorus_couchianus
ENSPFOG00000006990	cpsf6	99	100.000	ENSXMAG00000003459	cpsf6	50	96.610	Xiphophorus_maculatus