EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPFOG00000007001 (Gene tree)
Gene ID: -
Gene Symbol: PABPN1L
Alias: -
Full Name: embryonic polyadenylate-binding protein 2-B-like
Gene Type: protein_coding
Species: Poecilia_formosa
Status: putative
Strand: Plus strand
Length: 13234 bases
Position: chrKI519670.1:720642-733875
Accession: 103139340
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPFOP00000006917	RRM_1	PF00076.22	6.6e-16	1	1
ENSPFOP00000026729	RRM_1	PF00076.22	7.3e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPFOT00000006929	PABPN1L-202	1029	-	ENSPFOP00000006917	251 (aa)	-	A0A087XMB4
ENSPFOT00000030251	PABPN1L-201	1790	-	ENSPFOP00000026729	263 (aa)	XP_007553964	A0A096M5N8

Gene Model

Click here to download ENSPFOG00000007001's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000007001's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPFOG00000007001	PABPN1L	76	51.579	ENSPFOG00000010351	pabpn1	62	61.438

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPFOG00000007001	PABPN1L	89	44.206	ENSG00000205022	PABPN1L	58	53.374	Homo_sapiens
ENSPFOG00000007001	PABPN1L	91	90.000	ENSAPOG00000000685	PABPN1L	78	89.583	Acanthochromis_polyacanthus
ENSPFOG00000007001	PABPN1L	91	86.611	ENSACIG00000021400	PABPN1L	98	86.611	Amphilophus_citrinellus
ENSPFOG00000007001	PABPN1L	100	91.255	ENSAOCG00000019844	PABPN1L	100	91.255	Amphiprion_ocellaris
ENSPFOG00000007001	PABPN1L	100	91.635	ENSAPEG00000019534	PABPN1L	100	91.635	Amphiprion_percula
ENSPFOG00000007001	PABPN1L	91	90.795	ENSATEG00000011646	PABPN1L	95	89.958	Anabas_testudineus
ENSPFOG00000007001	PABPN1L	51	53.906	ENSAPLG00000009174	PABPN1L	81	63.542	Anas_platyrhynchos
ENSPFOG00000007001	PABPN1L	83	49.524	ENSACAG00000013250	PABPN1L	60	68.468	Anolis_carolinensis
ENSPFOG00000007001	PABPN1L	88	43.404	ENSANAG00000038178	PABPN1L	58	54.037	Aotus_nancymaae
ENSPFOG00000007001	PABPN1L	100	87.452	ENSACLG00000025147	PABPN1L	100	88.213	Astatotilapia_calliptera
ENSPFOG00000007001	PABPN1L	63	47.771	ENSBTAG00000006727	-	61	66.000	Bos_taurus
ENSPFOG00000007001	PABPN1L	100	82.955	ENSCSEG00000001142	pabpn1l	100	82.197	Cynoglossus_semilaevis
ENSPFOG00000007001	PABPN1L	100	97.719	ENSCVAG00000015547	PABPN1L	100	97.719	Cyprinodon_variegatus
ENSPFOG00000007001	PABPN1L	86	43.056	ENSDNOG00000034677	PABPN1L	57	43.316	Dasypus_novemcinctus
ENSPFOG00000007001	PABPN1L	89	43.043	ENSEASG00005000777	PABPN1L	61	51.786	Equus_asinus_asinus
ENSPFOG00000007001	PABPN1L	96	66.929	ENSELUG00000018385	PABPN1L	96	62.451	Esox_lucius
ENSPFOG00000007001	PABPN1L	80	44.175	ENSFCAG00000010465	PABPN1L	59	51.515	Felis_catus
ENSPFOG00000007001	PABPN1L	80	47.222	ENSFALG00000003319	PABPN1L	59	59.459	Ficedula_albicollis
ENSPFOG00000007001	PABPN1L	76	45.178	ENSFDAG00000021067	PABPN1L	60	52.147	Fukomys_damarensis
ENSPFOG00000007001	PABPN1L	100	96.198	ENSFHEG00000018295	PABPN1L	100	96.198	Fundulus_heteroclitus
ENSPFOG00000007001	PABPN1L	100	73.783	ENSGMOG00000001475	PABPN1L	100	72.659	Gadus_morhua
ENSPFOG00000007001	PABPN1L	72	51.111	ENSGALG00000006242	PABPN1L	63	64.865	Gallus_gallus
ENSPFOG00000007001	PABPN1L	100	99.620	ENSGAFG00000012565	PABPN1L	100	99.620	Gambusia_affinis
ENSPFOG00000007001	PABPN1L	100	83.895	ENSGACG00000015428	PABPN1L	100	83.895	Gasterosteus_aculeatus
ENSPFOG00000007001	PABPN1L	89	43.777	ENSGGOG00000012670	PABPN1L	59	52.695	Gorilla_gorilla
ENSPFOG00000007001	PABPN1L	100	89.354	ENSHBUG00000002388	PABPN1L	100	88.593	Haplochromis_burtoni
ENSPFOG00000007001	PABPN1L	100	84.701	ENSHCOG00000004151	PABPN1L	99	83.582	Hippocampus_comes
ENSPFOG00000007001	PABPN1L	67	63.536	ENSIPUG00000023583	PABPN1L	73	67.550	Ictalurus_punctatus
ENSPFOG00000007001	PABPN1L	91	43.231	ENSJJAG00000006433	Pabpn1l	58	53.459	Jaculus_jaculus
ENSPFOG00000007001	PABPN1L	82	92.093	ENSKMAG00000001112	PABPN1L	92	93.720	Kryptolebias_marmoratus
ENSPFOG00000007001	PABPN1L	100	85.660	ENSLBEG00000011647	PABPN1L	97	87.547	Labrus_bergylta
ENSPFOG00000007001	PABPN1L	89	44.206	ENSMFAG00000002924	PABPN1L	59	53.892	Macaca_fascicularis
ENSPFOG00000007001	PABPN1L	89	45.455	ENSMMUG00000012438	PABPN1L	59	53.614	Macaca_mulatta
ENSPFOG00000007001	PABPN1L	89	44.206	ENSMNEG00000044808	PABPN1L	59	53.892	Macaca_nemestrina
ENSPFOG00000007001	PABPN1L	89	43.966	ENSMLEG00000032667	PABPN1L	59	53.892	Mandrillus_leucophaeus
ENSPFOG00000007001	PABPN1L	100	87.452	ENSMZEG00005002186	PABPN1L	100	88.213	Maylandia_zebra
ENSPFOG00000007001	PABPN1L	75	90.909	ENSMMOG00000017714	PABPN1L	86	90.909	Mola_mola
ENSPFOG00000007001	PABPN1L	100	85.551	ENSMALG00000016926	PABPN1L	100	85.171	Monopterus_albus
ENSPFOG00000007001	PABPN1L	90	90.336	ENSNBRG00000017078	PABPN1L	100	89.496	Neolamprologus_brichardi
ENSPFOG00000007001	PABPN1L	100	83.650	ENSORLG00000026560	PABPN1L	100	80.989	Oryzias_latipes
ENSPFOG00000007001	PABPN1L	100	83.270	ENSORLG00020015068	PABPN1L	100	80.608	Oryzias_latipes_hni
ENSPFOG00000007001	PABPN1L	100	83.650	ENSORLG00015000397	PABPN1L	100	80.989	Oryzias_latipes_hsok
ENSPFOG00000007001	PABPN1L	100	81.749	ENSOMEG00000017896	PABPN1L	72	81.749	Oryzias_melastigma
ENSPFOG00000007001	PABPN1L	89	43.103	ENSPPAG00000028866	PABPN1L	58	43.939	Pan_paniscus
ENSPFOG00000007001	PABPN1L	80	44.175	ENSPPRG00000015106	PABPN1L	59	51.515	Panthera_pardus
ENSPFOG00000007001	PABPN1L	80	43.000	ENSPTIG00000015606	PABPN1L	61	50.314	Panthera_tigris_altaica
ENSPFOG00000007001	PABPN1L	89	43.103	ENSPTRG00000031120	PABPN1L	58	43.939	Pan_troglodytes
ENSPFOG00000007001	PABPN1L	78	54.082	ENSPSIG00000003404	PABPN1L	52	75.510	Pelodiscus_sinensis
ENSPFOG00000007001	PABPN1L	81	84.977	ENSPMGG00000013927	PABPN1L	91	85.990	Periophthalmus_magnuspinnatus
ENSPFOG00000007001	PABPN1L	67	49.112	ENSPCIG00000007038	-	67	69.072	Phascolarctos_cinereus
ENSPFOG00000007001	PABPN1L	100	100.000	ENSPLAG00000018431	PABPN1L	100	100.000	Poecilia_latipinna
ENSPFOG00000007001	PABPN1L	100	100.000	ENSPMEG00000009108	PABPN1L	100	100.000	Poecilia_mexicana
ENSPFOG00000007001	PABPN1L	66	93.820	ENSPMEG00000000169	-	91	91.304	Poecilia_mexicana
ENSPFOG00000007001	PABPN1L	88	99.567	ENSPREG00000022533	PABPN1L	100	99.567	Poecilia_reticulata
ENSPFOG00000007001	PABPN1L	89	42.672	ENSPPYG00000007655	PABPN1L	58	52.096	Pongo_abelii
ENSPFOG00000007001	PABPN1L	88	44.068	ENSPVAG00000002716	PABPN1L	58	54.545	Pteropus_vampyrus
ENSPFOG00000007001	PABPN1L	100	87.452	ENSPNYG00000004803	PABPN1L	100	88.213	Pundamilia_nyererei
ENSPFOG00000007001	PABPN1L	89	43.348	ENSRBIG00000030740	PABPN1L	59	52.695	Rhinopithecus_bieti
ENSPFOG00000007001	PABPN1L	89	45.267	ENSRROG00000035483	-	59	53.293	Rhinopithecus_roxellana
ENSPFOG00000007001	PABPN1L	89	43.348	ENSRROG00000032240	-	59	52.695	Rhinopithecus_roxellana
ENSPFOG00000007001	PABPN1L	89	44.351	ENSSBOG00000018410	PABPN1L	58	52.727	Saimiri_boliviensis_boliviensis
ENSPFOG00000007001	PABPN1L	100	83.271	ENSSMAG00000021348	PABPN1L	100	81.041	Scophthalmus_maximus
ENSPFOG00000007001	PABPN1L	100	90.875	ENSSDUG00000006986	PABPN1L	100	90.875	Seriola_dumerili
ENSPFOG00000007001	PABPN1L	100	91.255	ENSSLDG00000021845	PABPN1L	100	91.255	Seriola_lalandi_dorsalis
ENSPFOG00000007001	PABPN1L	100	90.494	ENSSPAG00000017978	PABPN1L	100	90.494	Stegastes_partitus
ENSPFOG00000007001	PABPN1L	100	79.848	ENSTRUG00000024725	PABPN1L	100	78.327	Takifugu_rubripes
ENSPFOG00000007001	PABPN1L	73	92.708	ENSTNIG00000009416	PABPN1L	100	92.708	Tetraodon_nigroviridis
ENSPFOG00000007001	PABPN1L	73	47.120	ENSXETG00000011258	pabpn1l	72	54.140	Xenopus_tropicalis
ENSPFOG00000007001	PABPN1L	88	99.567	ENSXCOG00000003254	PABPN1L	100	99.567	Xiphophorus_couchianus
ENSPFOG00000007001	PABPN1L	81	94.366	ENSXMAG00000029090	PABPN1L	89	99.495	Xiphophorus_maculatus