EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPFOG00000007005 (Gene tree)
Gene ID: 103145595
Gene Symbol: prpf8
Alias: -
Full Name: pre-mRNA processing factor 8
Gene Type: protein_coding
Species: Poecilia_formosa
Status: putative
Strand: Minus strand
Length: 16058 bases
Position: chrKI519754.1:1552202-1568259
Accession: 103145595
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPFOP00000007460	RRM_4	PF10598.9	2.9e-48	1	1
ENSPFOP00000007460	U5_2-snRNA_bdg	PF10597.9	6.9e-74	1	1
ENSPFOP00000007460	PRO8NT	PF08082.11	7.9e-88	1	1
ENSPFOP00000007460	U6-snRNA_bdg	PF10596.9	1.7e-89	1	1
ENSPFOP00000007460	PROCN	PF08083.11	2.8e-234	1	1
ENSPFOP00000007460	PRP8_domainIV	PF12134.8	4e-130	1	1
ENSPFOP00000007460	PROCT	PF08084.11	2.7e-53	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPFOT00000007472	-	7875	XM_007563083	ENSPFOP00000007460	2358 (aa)	XP_007563145	A0A087XNV7

Gene Model

Click here to download ENSPFOG00000007005's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000007005's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPFOG00000007005	prpf8	100	96.990	ENSG00000174231	PRPF8	100	96.990	Homo_sapiens
ENSPFOG00000007005	prpf8	100	98.388	ENSAPOG00000010079	prpf8	100	98.431	Acanthochromis_polyacanthus
ENSPFOG00000007005	prpf8	100	96.990	ENSAMEG00000007940	PRPF8	100	96.990	Ailuropoda_melanoleuca
ENSPFOG00000007005	prpf8	100	97.292	ENSACIG00000018280	prpf8	100	97.292	Amphilophus_citrinellus
ENSPFOG00000007005	prpf8	100	98.346	ENSAOCG00000010725	prpf8	100	98.388	Amphiprion_ocellaris
ENSPFOG00000007005	prpf8	100	98.346	ENSAPEG00000014397	prpf8	100	98.388	Amphiprion_percula
ENSPFOG00000007005	prpf8	100	97.795	ENSATEG00000010062	prpf8	100	97.837	Anabas_testudineus
ENSPFOG00000007005	prpf8	95	98.087	ENSAPLG00000010357	PRPF8	100	98.087	Anas_platyrhynchos
ENSPFOG00000007005	prpf8	82	96.342	ENSACAG00000014784	PRPF8	99	96.342	Anolis_carolinensis
ENSPFOG00000007005	prpf8	100	96.990	ENSANAG00000032629	PRPF8	100	96.990	Aotus_nancymaae
ENSPFOG00000007005	prpf8	100	98.643	ENSACLG00000020858	prpf8	100	98.643	Astatotilapia_calliptera
ENSPFOG00000007005	prpf8	100	97.837	ENSAMXG00000020291	prpf8	100	97.837	Astyanax_mexicanus
ENSPFOG00000007005	prpf8	100	96.990	ENSBTAG00000011488	PRPF8	100	96.990	Bos_taurus
ENSPFOG00000007005	prpf8	98	86.446	WBGene00004187	prp-8	99	86.894	Caenorhabditis_elegans
ENSPFOG00000007005	prpf8	100	96.990	ENSCJAG00000001911	PRPF8	100	96.990	Callithrix_jacchus
ENSPFOG00000007005	prpf8	100	96.990	ENSCAFG00000019221	PRPF8	100	96.990	Canis_familiaris
ENSPFOG00000007005	prpf8	95	98.170	ENSCAFG00020009943	PRPF8	100	98.170	Canis_lupus_dingo
ENSPFOG00000007005	prpf8	100	96.990	ENSCHIG00000017499	PRPF8	100	96.990	Capra_hircus
ENSPFOG00000007005	prpf8	100	96.990	ENSTSYG00000014120	PRPF8	100	96.990	Carlito_syrichta
ENSPFOG00000007005	prpf8	95	95.947	ENSCAPG00000009459	PRPF8	99	95.947	Cavia_aperea
ENSPFOG00000007005	prpf8	100	96.990	ENSCPOG00000010379	PRPF8	100	96.990	Cavia_porcellus
ENSPFOG00000007005	prpf8	100	96.990	ENSCCAG00000031983	-	100	96.990	Cebus_capucinus
ENSPFOG00000007005	prpf8	100	96.990	ENSCATG00000038595	PRPF8	100	96.990	Cercocebus_atys
ENSPFOG00000007005	prpf8	100	96.990	ENSCLAG00000004388	PRPF8	100	96.990	Chinchilla_lanigera
ENSPFOG00000007005	prpf8	100	96.990	ENSCSAG00000013929	PRPF8	100	96.990	Chlorocebus_sabaeus
ENSPFOG00000007005	prpf8	81	97.333	ENSCHOG00000008590	PRPF8	87	97.333	Choloepus_hoffmanni
ENSPFOG00000007005	prpf8	100	96.947	ENSCPBG00000020409	PRPF8	100	96.947	Chrysemys_picta_bellii
ENSPFOG00000007005	prpf8	98	92.637	ENSCSAVG00000007825	-	100	91.366	Ciona_savignyi
ENSPFOG00000007005	prpf8	100	96.990	ENSCANG00000043088	PRPF8	100	96.990	Colobus_angolensis_palliatus
ENSPFOG00000007005	prpf8	73	99.409	ENSCGRG00000005129	Prpf8	100	99.409	Cricetulus_griseus_crigri
ENSPFOG00000007005	prpf8	100	98.219	ENSCSEG00000007905	prpf8	100	98.219	Cynoglossus_semilaevis
ENSPFOG00000007005	prpf8	100	98.049	ENSDARG00000026180	prpf8	100	98.049	Danio_rerio
ENSPFOG00000007005	prpf8	93	97.358	ENSDNOG00000018471	PRPF8	99	97.358	Dasypus_novemcinctus
ENSPFOG00000007005	prpf8	84	95.394	ENSDORG00000006185	Prpf8	96	95.394	Dipodomys_ordii
ENSPFOG00000007005	prpf8	99	91.228	FBgn0033688	Prp8	97	91.793	Drosophila_melanogaster
ENSPFOG00000007005	prpf8	100	91.649	ENSETEG00000017592	PRPF8	100	91.649	Echinops_telfairi
ENSPFOG00000007005	prpf8	99	93.433	ENSEBUG00000006548	prpf8	99	93.433	Eptatretus_burgeri
ENSPFOG00000007005	prpf8	100	96.990	ENSEASG00005009514	PRPF8	99	98.486	Equus_asinus_asinus
ENSPFOG00000007005	prpf8	96	98.198	ENSECAG00000021318	PRPF8	100	98.198	Equus_caballus
ENSPFOG00000007005	prpf8	67	98.519	ENSEEUG00000012120	-	66	98.519	Erinaceus_europaeus
ENSPFOG00000007005	prpf8	98	96.750	ENSELUG00000007120	prpf8	99	96.794	Esox_lucius
ENSPFOG00000007005	prpf8	100	96.990	ENSFCAG00000006297	PRPF8	100	96.990	Felis_catus
ENSPFOG00000007005	prpf8	100	97.031	ENSFALG00000006628	PRPF8	100	97.031	Ficedula_albicollis
ENSPFOG00000007005	prpf8	100	96.990	ENSFDAG00000004711	PRPF8	100	96.990	Fukomys_damarensis
ENSPFOG00000007005	prpf8	100	98.558	ENSFHEG00000021084	prpf8	100	98.601	Fundulus_heteroclitus
ENSPFOG00000007005	prpf8	100	95.763	ENSGMOG00000002028	prpf8	99	95.763	Gadus_morhua
ENSPFOG00000007005	prpf8	100	97.031	ENSGALG00000002943	PRPF8	100	97.031	Gallus_gallus
ENSPFOG00000007005	prpf8	99	99.702	ENSGAFG00000010337	prpf8	100	99.702	Gambusia_affinis
ENSPFOG00000007005	prpf8	100	98.176	ENSGACG00000008504	prpf8	100	98.378	Gasterosteus_aculeatus
ENSPFOG00000007005	prpf8	100	96.989	ENSGAGG00000008350	PRPF8	100	96.989	Gopherus_agassizii
ENSPFOG00000007005	prpf8	100	96.990	ENSGGOG00000005516	PRPF8	100	96.990	Gorilla_gorilla
ENSPFOG00000007005	prpf8	100	97.964	ENSHBUG00000016192	prpf8	100	97.964	Haplochromis_burtoni
ENSPFOG00000007005	prpf8	100	96.990	ENSHGLG00000012029	PRPF8	100	96.990	Heterocephalus_glaber_female
ENSPFOG00000007005	prpf8	100	96.990	ENSHGLG00100016494	PRPF8	100	96.990	Heterocephalus_glaber_male
ENSPFOG00000007005	prpf8	100	98.049	ENSHCOG00000016414	prpf8	100	98.049	Hippocampus_comes
ENSPFOG00000007005	prpf8	100	97.837	ENSIPUG00000023230	prpf8	100	97.880	Ictalurus_punctatus
ENSPFOG00000007005	prpf8	100	96.990	ENSSTOG00000005128	PRPF8	100	96.990	Ictidomys_tridecemlineatus
ENSPFOG00000007005	prpf8	100	94.871	ENSJJAG00000021159	Prpf8	100	94.871	Jaculus_jaculus
ENSPFOG00000007005	prpf8	99	99.061	ENSKMAG00000016118	prpf8	100	99.061	Kryptolebias_marmoratus
ENSPFOG00000007005	prpf8	100	98.092	ENSLBEG00000026903	prpf8	100	98.134	Labrus_bergylta
ENSPFOG00000007005	prpf8	95	94.817	ENSLACG00000010479	PRPF8	99	98.357	Latimeria_chalumnae
ENSPFOG00000007005	prpf8	99	97.541	ENSLOCG00000005409	prpf8	99	97.541	Lepisosteus_oculatus
ENSPFOG00000007005	prpf8	100	96.990	ENSLAFG00000015445	PRPF8	100	96.990	Loxodonta_africana
ENSPFOG00000007005	prpf8	100	96.990	ENSMFAG00000039995	PRPF8	100	96.990	Macaca_fascicularis
ENSPFOG00000007005	prpf8	100	96.990	ENSMMUG00000004820	PRPF8	100	96.990	Macaca_mulatta
ENSPFOG00000007005	prpf8	100	96.990	ENSMNEG00000035713	PRPF8	100	96.990	Macaca_nemestrina
ENSPFOG00000007005	prpf8	100	96.990	ENSMLEG00000037937	PRPF8	100	96.990	Mandrillus_leucophaeus
ENSPFOG00000007005	prpf8	100	98.346	ENSMAMG00000008919	prpf8	100	98.388	Mastacembelus_armatus
ENSPFOG00000007005	prpf8	100	98.643	ENSMZEG00005015073	prpf8	100	98.643	Maylandia_zebra
ENSPFOG00000007005	prpf8	100	97.031	ENSMGAG00000004769	PRPF8	100	97.031	Meleagris_gallopavo
ENSPFOG00000007005	prpf8	100	96.990	ENSMICG00000010320	PRPF8	100	96.990	Microcebus_murinus
ENSPFOG00000007005	prpf8	100	96.990	ENSMOCG00000016838	Prpf8	100	96.990	Microtus_ochrogaster
ENSPFOG00000007005	prpf8	100	97.795	ENSMMOG00000011887	prpf8	100	97.837	Mola_mola
ENSPFOG00000007005	prpf8	100	96.905	ENSMODG00000010480	PRPF8	100	96.905	Monodelphis_domestica
ENSPFOG00000007005	prpf8	97	98.536	ENSMALG00000003558	prpf8	100	98.536	Monopterus_albus
ENSPFOG00000007005	prpf8	100	96.948	MGP_CAROLIEiJ_G0016740	Prpf8	100	96.948	Mus_caroli
ENSPFOG00000007005	prpf8	100	96.948	ENSMUSG00000020850	Prpf8	100	96.948	Mus_musculus
ENSPFOG00000007005	prpf8	100	96.905	MGP_PahariEiJ_G0017877	Prpf8	100	96.905	Mus_pahari
ENSPFOG00000007005	prpf8	100	96.948	MGP_SPRETEiJ_G0017583	Prpf8	100	96.948	Mus_spretus
ENSPFOG00000007005	prpf8	100	96.990	ENSMPUG00000013227	PRPF8	100	96.990	Mustela_putorius_furo
ENSPFOG00000007005	prpf8	100	96.867	ENSMLUG00000002666	PRPF8	100	96.867	Myotis_lucifugus
ENSPFOG00000007005	prpf8	100	95.252	ENSNGAG00000005305	Prpf8	100	95.252	Nannospalax_galili
ENSPFOG00000007005	prpf8	100	98.685	ENSNBRG00000013127	prpf8	100	98.685	Neolamprologus_brichardi
ENSPFOG00000007005	prpf8	97	96.756	ENSNLEG00000000897	PRPF8	98	96.756	Nomascus_leucogenys
ENSPFOG00000007005	prpf8	98	96.306	ENSMEUG00000015999	PRPF8	100	96.306	Notamacropus_eugenii
ENSPFOG00000007005	prpf8	100	95.507	ENSOPRG00000003102	PRPF8	99	96.714	Ochotona_princeps
ENSPFOG00000007005	prpf8	100	96.990	ENSODEG00000008468	PRPF8	100	96.990	Octodon_degus
ENSPFOG00000007005	prpf8	100	98.685	ENSONIG00000008153	prpf8	100	98.685	Oreochromis_niloticus
ENSPFOG00000007005	prpf8	81	99.065	ENSOANG00000004250	PRPF8	97	99.065	Ornithorhynchus_anatinus
ENSPFOG00000007005	prpf8	100	96.990	ENSOCUG00000000081	PRPF8	100	96.990	Oryctolagus_cuniculus
ENSPFOG00000007005	prpf8	100	98.813	ENSORLG00000008036	prpf8	100	98.813	Oryzias_latipes
ENSPFOG00000007005	prpf8	100	98.771	ENSORLG00020021070	prpf8	100	98.771	Oryzias_latipes_hni
ENSPFOG00000007005	prpf8	100	98.855	ENSORLG00015002340	prpf8	100	98.855	Oryzias_latipes_hsok
ENSPFOG00000007005	prpf8	100	97.243	ENSOMEG00000016866	prpf8	100	97.243	Oryzias_melastigma
ENSPFOG00000007005	prpf8	100	96.867	ENSOARG00000013312	PRPF8	100	96.867	Ovis_aries
ENSPFOG00000007005	prpf8	100	96.990	ENSPPAG00000042753	PRPF8	100	96.990	Pan_paniscus
ENSPFOG00000007005	prpf8	100	96.990	ENSPPRG00000008746	PRPF8	100	96.990	Panthera_pardus
ENSPFOG00000007005	prpf8	100	96.905	ENSPTIG00000019200	PRPF8	100	96.905	Panthera_tigris_altaica
ENSPFOG00000007005	prpf8	100	96.990	ENSPTRG00000039576	PRPF8	100	96.990	Pan_troglodytes
ENSPFOG00000007005	prpf8	98	98.219	ENSPANG00000024607	PRPF8	98	98.219	Papio_anubis
ENSPFOG00000007005	prpf8	100	98.092	ENSPKIG00000011201	prpf8	100	98.092	Paramormyrops_kingsleyae
ENSPFOG00000007005	prpf8	100	96.904	ENSPSIG00000013393	PRPF8	100	96.904	Pelodiscus_sinensis
ENSPFOG00000007005	prpf8	100	96.990	ENSPEMG00000021699	Prpf8	100	96.990	Peromyscus_maniculatus_bairdii
ENSPFOG00000007005	prpf8	95	93.764	ENSPMAG00000005438	prpf8	100	93.808	Petromyzon_marinus
ENSPFOG00000007005	prpf8	100	96.905	ENSPCIG00000022603	PRPF8	100	98.081	Phascolarctos_cinereus
ENSPFOG00000007005	prpf8	100	97.498	ENSPLAG00000020777	prpf8	100	97.498	Poecilia_latipinna
ENSPFOG00000007005	prpf8	100	100.000	ENSPMEG00000004051	prpf8	100	100.000	Poecilia_mexicana
ENSPFOG00000007005	prpf8	100	99.788	ENSPREG00000021902	prpf8	100	99.788	Poecilia_reticulata
ENSPFOG00000007005	prpf8	100	96.990	ENSPPYG00000007777	PRPF8	100	96.990	Pongo_abelii
ENSPFOG00000007005	prpf8	90	96.287	ENSPCAG00000008938	PRPF8	90	96.287	Procavia_capensis
ENSPFOG00000007005	prpf8	100	96.990	ENSPCOG00000015182	PRPF8	100	96.990	Propithecus_coquereli
ENSPFOG00000007005	prpf8	93	98.614	ENSPVAG00000002134	PRPF8	93	98.614	Pteropus_vampyrus
ENSPFOG00000007005	prpf8	100	97.964	ENSPNYG00000016356	prpf8	100	97.964	Pundamilia_nyererei
ENSPFOG00000007005	prpf8	100	97.964	ENSPNAG00000009247	prpf8	100	98.007	Pygocentrus_nattereri
ENSPFOG00000007005	prpf8	100	96.948	ENSRNOG00000003495	Prpf8	100	96.948	Rattus_norvegicus
ENSPFOG00000007005	prpf8	100	96.990	ENSRBIG00000031219	PRPF8	100	97.724	Rhinopithecus_bieti
ENSPFOG00000007005	prpf8	100	96.990	ENSRROG00000038014	PRPF8	100	97.724	Rhinopithecus_roxellana
ENSPFOG00000007005	prpf8	98	62.516	YHR165C	PRP8	95	62.559	Saccharomyces_cerevisiae
ENSPFOG00000007005	prpf8	100	96.990	ENSSBOG00000029717	PRPF8	100	96.990	Saimiri_boliviensis_boliviensis
ENSPFOG00000007005	prpf8	100	96.863	ENSSHAG00000006167	PRPF8	100	96.863	Sarcophilus_harrisii
ENSPFOG00000007005	prpf8	100	98.049	ENSSFOG00015013905	prpf8	100	98.049	Scleropages_formosus
ENSPFOG00000007005	prpf8	100	97.964	ENSSMAG00000017736	prpf8	100	97.964	Scophthalmus_maximus
ENSPFOG00000007005	prpf8	100	98.304	ENSSDUG00000003029	prpf8	100	98.346	Seriola_dumerili
ENSPFOG00000007005	prpf8	68	99.687	ENSSLDG00000017096	prpf8	100	99.687	Seriola_lalandi_dorsalis
ENSPFOG00000007005	prpf8	87	94.336	ENSSARG00000002892	PRPF8	87	94.336	Sorex_araneus
ENSPFOG00000007005	prpf8	100	96.862	ENSSPUG00000007463	PRPF8	100	96.862	Sphenodon_punctatus
ENSPFOG00000007005	prpf8	100	97.795	ENSSPAG00000015639	prpf8	100	97.837	Stegastes_partitus
ENSPFOG00000007005	prpf8	100	96.990	ENSSSCG00000017817	PRPF8	100	96.990	Sus_scrofa
ENSPFOG00000007005	prpf8	51	98.604	ENSTGUG00000015597	-	95	98.604	Taeniopygia_guttata
ENSPFOG00000007005	prpf8	100	97.031	ENSTGUG00000005648	-	100	97.031	Taeniopygia_guttata
ENSPFOG00000007005	prpf8	100	97.752	ENSTRUG00000015906	prpf8	100	97.795	Takifugu_rubripes
ENSPFOG00000007005	prpf8	95	99.343	ENSTNIG00000003460	prpf8	99	99.343	Tetraodon_nigroviridis
ENSPFOG00000007005	prpf8	88	98.979	ENSTBEG00000006431	PRPF8	89	98.979	Tupaia_belangeri
ENSPFOG00000007005	prpf8	100	96.397	ENSTTRG00000006869	PRPF8	100	96.397	Tursiops_truncatus
ENSPFOG00000007005	prpf8	54	95.401	ENSUAMG00000015644	-	96	95.401	Ursus_americanus
ENSPFOG00000007005	prpf8	100	96.736	ENSUMAG00000009385	PRPF8	100	96.736	Ursus_maritimus
ENSPFOG00000007005	prpf8	71	97.931	ENSVPAG00000006063	-	70	97.931	Vicugna_pacos
ENSPFOG00000007005	prpf8	99	96.993	ENSVVUG00000021695	PRPF8	99	96.990	Vulpes_vulpes
ENSPFOG00000007005	prpf8	100	96.694	ENSXETG00000022259	prpf8	100	96.694	Xenopus_tropicalis
ENSPFOG00000007005	prpf8	100	99.109	ENSXCOG00000012775	prpf8	100	99.152	Xiphophorus_couchianus
ENSPFOG00000007005	prpf8	100	99.067	ENSXMAG00000008505	prpf8	100	99.109	Xiphophorus_maculatus