EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPFOG00000007378 (Gene tree)
Gene ID: 103141628
Gene Symbol: ern1
Alias: -
Full Name: endoplasmic reticulum to nucleus signaling 1
Gene Type: protein_coding
Species: Poecilia_formosa
Status: putative
Strand: Plus strand
Length: 22296 bases
Position: chrKI519698.1:711244-733539
Accession: 103141628
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPFOP00000007639	Ribonuc_2-5A	PF06479.12	3.8e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPFOT00000007651	-	5533	-	ENSPFOP00000007639	1060 (aa)	XP_007557413	A0A087XPD6

Gene Model

Click here to download ENSPFOG00000007378's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000007378's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPFOG00000007378	ern1	81	55.079	ENSPFOG00000006600	-	99	54.740

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPFOG00000007378	ern1	96	88.986	ENSAPOG00000009999	ern1	95	88.986	Acanthochromis_polyacanthus
ENSPFOG00000007378	ern1	98	87.204	ENSACIG00000021716	ern1	96	87.204	Amphilophus_citrinellus
ENSPFOG00000007378	ern1	94	90.774	ENSAOCG00000012309	ern1	93	90.774	Amphiprion_ocellaris
ENSPFOG00000007378	ern1	96	89.008	ENSAPEG00000011263	ern1	98	92.757	Amphiprion_percula
ENSPFOG00000007378	ern1	95	87.743	ENSATEG00000024468	ern1	94	88.431	Anabas_testudineus
ENSPFOG00000007378	ern1	97	88.506	ENSACLG00000027919	ern1	96	88.506	Astatotilapia_calliptera
ENSPFOG00000007378	ern1	99	79.032	ENSAMXG00000000944	ern1	99	79.032	Astyanax_mexicanus
ENSPFOG00000007378	ern1	90	88.521	ENSCSEG00000014500	ern1	99	86.377	Cynoglossus_semilaevis
ENSPFOG00000007378	ern1	100	91.745	ENSCVAG00000002988	ern1	100	91.745	Cyprinodon_variegatus
ENSPFOG00000007378	ern1	91	81.153	ENSDARG00000013997	ern1	100	81.432	Danio_rerio
ENSPFOG00000007378	ern1	97	77.303	ENSELUG00000005957	ern1	99	77.303	Esox_lucius
ENSPFOG00000007378	ern1	99	90.952	ENSFHEG00000005578	ern1	99	90.952	Fundulus_heteroclitus
ENSPFOG00000007378	ern1	88	86.752	ENSGMOG00000011232	ern1	100	86.752	Gadus_morhua
ENSPFOG00000007378	ern1	100	97.547	ENSGAFG00000020231	ern1	100	97.547	Gambusia_affinis
ENSPFOG00000007378	ern1	88	90.278	ENSGACG00000011700	ern1	97	90.278	Gasterosteus_aculeatus
ENSPFOG00000007378	ern1	94	88.900	ENSHBUG00000012581	ern1	95	88.900	Haplochromis_burtoni
ENSPFOG00000007378	ern1	90	87.643	ENSHCOG00000016199	ern1	91	87.643	Hippocampus_comes
ENSPFOG00000007378	ern1	99	77.989	ENSIPUG00000011083	ern1	98	77.989	Ictalurus_punctatus
ENSPFOG00000007378	ern1	95	89.254	ENSKMAG00000019499	ern1	98	86.364	Kryptolebias_marmoratus
ENSPFOG00000007378	ern1	96	83.301	ENSLBEG00000025907	ern1	97	83.301	Labrus_bergylta
ENSPFOG00000007378	ern1	97	87.078	ENSMAMG00000023439	ern1	95	87.175	Mastacembelus_armatus
ENSPFOG00000007378	ern1	97	88.506	ENSMZEG00005003221	ern1	96	88.506	Maylandia_zebra
ENSPFOG00000007378	ern1	91	89.231	ENSMMOG00000007650	ern1	97	89.231	Mola_mola
ENSPFOG00000007378	ern1	91	90.574	ENSMALG00000017775	ern1	89	90.574	Monopterus_albus
ENSPFOG00000007378	ern1	94	89.604	ENSNBRG00000002179	ern1	94	89.604	Neolamprologus_brichardi
ENSPFOG00000007378	ern1	90	90.377	ENSONIG00000017169	ern1	99	90.377	Oreochromis_niloticus
ENSPFOG00000007378	ern1	99	84.118	ENSORLG00000008940	ern1	99	84.972	Oryzias_latipes
ENSPFOG00000007378	ern1	98	84.738	ENSORLG00020018387	ern1	99	85.607	Oryzias_latipes_hni
ENSPFOG00000007378	ern1	98	84.536	ENSORLG00015007946	ern1	99	85.405	Oryzias_latipes_hsok
ENSPFOG00000007378	ern1	98	86.321	ENSOMEG00000011741	ern1	98	86.321	Oryzias_melastigma
ENSPFOG00000007378	ern1	90	83.281	ENSPKIG00000005593	ern1	97	83.281	Paramormyrops_kingsleyae
ENSPFOG00000007378	ern1	92	88.469	ENSPMGG00000020442	ern1	97	86.486	Periophthalmus_magnuspinnatus
ENSPFOG00000007378	ern1	100	99.623	ENSPLAG00000014780	ern1	100	99.623	Poecilia_latipinna
ENSPFOG00000007378	ern1	100	99.528	ENSPMEG00000016324	ern1	100	99.528	Poecilia_mexicana
ENSPFOG00000007378	ern1	100	98.679	ENSPREG00000006286	ern1	100	98.679	Poecilia_reticulata
ENSPFOG00000007378	ern1	97	88.506	ENSPNYG00000017929	ern1	98	90.575	Pundamilia_nyererei
ENSPFOG00000007378	ern1	98	80.478	ENSPNAG00000029447	ern1	99	80.574	Pygocentrus_nattereri
ENSPFOG00000007378	ern1	99	84.877	ENSSMAG00000015042	ern1	96	84.877	Scophthalmus_maximus
ENSPFOG00000007378	ern1	99	87.465	ENSSDUG00000009098	ern1	98	87.465	Seriola_dumerili
ENSPFOG00000007378	ern1	99	87.371	ENSSLDG00000023254	ern1	98	87.371	Seriola_lalandi_dorsalis
ENSPFOG00000007378	ern1	96	89.234	ENSSPAG00000017539	ern1	95	89.234	Stegastes_partitus
ENSPFOG00000007378	ern1	93	86.259	ENSTRUG00000001041	ern1	96	86.259	Takifugu_rubripes
ENSPFOG00000007378	ern1	89	89.989	ENSTNIG00000017990	ern1	99	90.105	Tetraodon_nigroviridis
ENSPFOG00000007378	ern1	97	94.385	ENSXCOG00000010330	ern1	97	98.974	Xiphophorus_couchianus
ENSPFOG00000007378	ern1	100	97.736	ENSXMAG00000001310	ern1	100	97.736	Xiphophorus_maculatus