EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPFOG00000007437 (Gene tree)
Gene ID: 103152901
Gene Symbol: -
Alias: -
Full Name: APOBEC1 complementation factor-like
Gene Type: protein_coding
Species: Poecilia_formosa
Status: putative
Strand: Plus strand
Length: 13458 bases
Position: chrKI519943.1:665477-678934
Accession: 103152901
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPFOP00000007420	DND1_DSRM	PF14709.7	4.7e-26	1	1
ENSPFOP00000007420	RRM_1	PF00076.22	1.2e-40	1	3
ENSPFOP00000007420	RRM_1	PF00076.22	1.2e-40	2	3
ENSPFOP00000007420	RRM_1	PF00076.22	1.2e-40	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPFOT00000007432	-	3816	XM_007573561	ENSPFOP00000007420	614 (aa)	XP_007573623	A0A087XNR7

Gene Model

Click here to download ENSPFOG00000007437's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000007437's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPFOG00000007437	-	52	51.875	ENSPFOG00000017273	-	62	53.925
ENSPFOG00000007437	-	86	49.270	ENSPFOG00000001079	rbm46	94	49.251
ENSPFOG00000007437	-	87	52.897	ENSPFOG00000007997	rbm47	75	50.926
ENSPFOG00000007437	-	100	99.674	ENSPFOG00000006683	a1cf	100	99.674

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPFOG00000007437	-	100	77.199	ENSG00000148584	A1CF	100	87.129	Homo_sapiens
ENSPFOG00000007437	-	100	84.665	ENSAPOG00000008259	a1cf	100	84.039	Acanthochromis_polyacanthus
ENSPFOG00000007437	-	100	76.221	ENSAMEG00000000523	A1CF	100	75.570	Ailuropoda_melanoleuca
ENSPFOG00000007437	-	100	87.317	ENSACIG00000008632	a1cf	100	89.106	Amphilophus_citrinellus
ENSPFOG00000007437	-	100	86.319	ENSAOCG00000023744	a1cf	97	89.459	Amphiprion_ocellaris
ENSPFOG00000007437	-	100	87.459	ENSAPEG00000009537	a1cf	100	87.296	Amphiprion_percula
ENSPFOG00000007437	-	100	90.391	ENSATEG00000013720	a1cf	100	90.391	Anabas_testudineus
ENSPFOG00000007437	-	100	77.362	ENSAPLG00000002964	A1CF	100	75.896	Anas_platyrhynchos
ENSPFOG00000007437	-	100	75.896	ENSACAG00000015269	A1CF	100	75.407	Anolis_carolinensis
ENSPFOG00000007437	-	100	77.036	ENSANAG00000019974	A1CF	100	75.244	Aotus_nancymaae
ENSPFOG00000007437	-	100	84.878	ENSACLG00000017428	a1cf	100	84.065	Astatotilapia_calliptera
ENSPFOG00000007437	-	100	76.537	ENSAMXG00000018180	a1cf	100	75.566	Astyanax_mexicanus
ENSPFOG00000007437	-	100	76.384	ENSBTAG00000021195	A1CF	100	75.244	Bos_taurus
ENSPFOG00000007437	-	100	78.013	ENSCJAG00000005045	A1CF	100	76.221	Callithrix_jacchus
ENSPFOG00000007437	-	100	77.036	ENSCAFG00000015581	A1CF	100	75.407	Canis_familiaris
ENSPFOG00000007437	-	100	77.036	ENSCAFG00020026421	A1CF	98	82.274	Canis_lupus_dingo
ENSPFOG00000007437	-	100	78.013	ENSCHIG00000020411	A1CF	100	76.873	Capra_hircus
ENSPFOG00000007437	-	94	77.069	ENSTSYG00000001755	A1CF	100	74.483	Carlito_syrichta
ENSPFOG00000007437	-	100	73.178	ENSCAPG00000017386	A1CF	100	75.080	Cavia_aperea
ENSPFOG00000007437	-	100	76.710	ENSCPOG00000009807	A1CF	100	75.081	Cavia_porcellus
ENSPFOG00000007437	-	100	78.013	ENSCCAG00000018168	A1CF	100	76.059	Cebus_capucinus
ENSPFOG00000007437	-	100	76.221	ENSCATG00000043715	A1CF	100	74.756	Cercocebus_atys
ENSPFOG00000007437	-	100	76.547	ENSCLAG00000010424	A1CF	100	74.593	Chinchilla_lanigera
ENSPFOG00000007437	-	100	77.199	ENSCSAG00000007032	A1CF	100	75.733	Chlorocebus_sabaeus
ENSPFOG00000007437	-	98	73.147	ENSCHOG00000009089	A1CF	94	73.801	Choloepus_hoffmanni
ENSPFOG00000007437	-	100	77.850	ENSCPBG00000026464	A1CF	100	76.059	Chrysemys_picta_bellii
ENSPFOG00000007437	-	100	77.362	ENSCANG00000038032	A1CF	100	75.896	Colobus_angolensis_palliatus
ENSPFOG00000007437	-	100	76.710	ENSCGRG00001017413	A1cf	100	75.407	Cricetulus_griseus_chok1gshd
ENSPFOG00000007437	-	100	75.649	ENSCGRG00000017332	A1cf	100	74.756	Cricetulus_griseus_crigri
ENSPFOG00000007437	-	100	86.107	ENSCSEG00000002361	a1cf	100	86.107	Cynoglossus_semilaevis
ENSPFOG00000007437	-	100	94.625	ENSCVAG00000010520	a1cf	100	94.625	Cyprinodon_variegatus
ENSPFOG00000007437	-	100	81.759	ENSDARG00000002968	a1cf	100	80.456	Danio_rerio
ENSPFOG00000007437	-	100	77.199	ENSDNOG00000002829	A1CF	100	75.896	Dasypus_novemcinctus
ENSPFOG00000007437	-	81	84.058	ENSETEG00000012527	A1CF	81	84.058	Echinops_telfairi
ENSPFOG00000007437	-	100	77.398	ENSEASG00005012924	A1CF	100	75.935	Equus_asinus_asinus
ENSPFOG00000007437	-	100	77.073	ENSECAG00000010424	A1CF	100	75.610	Equus_caballus
ENSPFOG00000007437	-	79	66.116	ENSEEUG00000000013	A1CF	97	65.236	Erinaceus_europaeus
ENSPFOG00000007437	-	100	82.248	ENSELUG00000003159	a1cf	100	81.270	Esox_lucius
ENSPFOG00000007437	-	100	75.325	ENSFCAG00000011179	A1CF	100	74.430	Felis_catus
ENSPFOG00000007437	-	100	76.873	ENSFALG00000013183	A1CF	100	75.244	Ficedula_albicollis
ENSPFOG00000007437	-	100	76.059	ENSFDAG00000019371	A1CF	100	74.593	Fukomys_damarensis
ENSPFOG00000007437	-	100	87.948	ENSFHEG00000019652	a1cf	96	96.094	Fundulus_heteroclitus
ENSPFOG00000007437	-	100	79.479	ENSGMOG00000018943	a1cf	100	78.339	Gadus_morhua
ENSPFOG00000007437	-	96	76.570	ENSGALG00000003765	A1CF	96	75.387	Gallus_gallus
ENSPFOG00000007437	-	100	89.088	ENSGAFG00000014868	a1cf	100	88.111	Gambusia_affinis
ENSPFOG00000007437	-	100	86.971	ENSGACG00000010241	a1cf	100	85.993	Gasterosteus_aculeatus
ENSPFOG00000007437	-	96	76.570	ENSGAGG00000016508	A1CF	98	74.703	Gopherus_agassizii
ENSPFOG00000007437	-	100	77.199	ENSGGOG00000009670	A1CF	100	75.733	Gorilla_gorilla
ENSPFOG00000007437	-	100	87.642	ENSHBUG00000021959	a1cf	100	87.805	Haplochromis_burtoni
ENSPFOG00000007437	-	100	77.362	ENSHGLG00000008955	A1CF	100	75.407	Heterocephalus_glaber_female
ENSPFOG00000007437	-	100	76.710	ENSHGLG00100000518	A1CF	100	74.756	Heterocephalus_glaber_male
ENSPFOG00000007437	-	100	75.080	ENSHCOG00000017669	a1cf	100	77.010	Hippocampus_comes
ENSPFOG00000007437	-	89	84.191	ENSIPUG00000010367	a1cf	95	83.088	Ictalurus_punctatus
ENSPFOG00000007437	-	100	91.248	ENSKMAG00000006568	a1cf	100	89.303	Kryptolebias_marmoratus
ENSPFOG00000007437	-	99	89.577	ENSLBEG00000020994	a1cf	99	89.414	Labrus_bergylta
ENSPFOG00000007437	-	100	77.524	ENSLACG00000008061	A1CF	100	75.733	Latimeria_chalumnae
ENSPFOG00000007437	-	100	82.736	ENSLOCG00000006302	a1cf	100	80.945	Lepisosteus_oculatus
ENSPFOG00000007437	-	100	77.362	ENSLAFG00000015462	A1CF	100	76.547	Loxodonta_africana
ENSPFOG00000007437	-	100	76.221	ENSMFAG00000035948	A1CF	100	74.756	Macaca_fascicularis
ENSPFOG00000007437	-	100	76.221	ENSMMUG00000007077	A1CF	100	74.756	Macaca_mulatta
ENSPFOG00000007437	-	100	76.059	ENSMNEG00000031454	A1CF	100	74.593	Macaca_nemestrina
ENSPFOG00000007437	-	100	77.362	ENSMLEG00000037223	A1CF	100	75.896	Mandrillus_leucophaeus
ENSPFOG00000007437	-	100	87.805	ENSMAMG00000010402	a1cf	100	86.504	Mastacembelus_armatus
ENSPFOG00000007437	-	100	86.808	ENSMZEG00005013245	a1cf	100	85.668	Maylandia_zebra
ENSPFOG00000007437	-	100	76.748	ENSMGAG00000001507	A1CF	100	75.122	Meleagris_gallopavo
ENSPFOG00000007437	-	100	76.221	ENSMAUG00000007422	A1cf	100	75.081	Mesocricetus_auratus
ENSPFOG00000007437	-	100	75.325	ENSMICG00000003377	A1CF	100	74.675	Microcebus_murinus
ENSPFOG00000007437	-	100	76.547	ENSMOCG00000021536	A1cf	100	75.081	Microtus_ochrogaster
ENSPFOG00000007437	-	100	76.059	ENSMMOG00000009422	a1cf	100	75.081	Mola_mola
ENSPFOG00000007437	-	89	77.615	ENSMODG00000016478	A1CF	97	75.780	Monodelphis_domestica
ENSPFOG00000007437	-	100	79.126	ENSMALG00000012992	a1cf	100	78.990	Monopterus_albus
ENSPFOG00000007437	-	100	76.384	MGP_CAROLIEiJ_G0022873	A1cf	100	74.919	Mus_caroli
ENSPFOG00000007437	-	100	76.384	ENSMUSG00000052595	A1cf	99	82.292	Mus_musculus
ENSPFOG00000007437	-	100	75.570	MGP_PahariEiJ_G0014366	A1cf	100	74.104	Mus_pahari
ENSPFOG00000007437	-	100	76.384	MGP_SPRETEiJ_G0023792	A1cf	100	74.919	Mus_spretus
ENSPFOG00000007437	-	100	72.150	ENSMPUG00000016971	A1CF	100	70.521	Mustela_putorius_furo
ENSPFOG00000007437	-	100	76.948	ENSMLUG00000016071	A1CF	100	76.059	Myotis_lucifugus
ENSPFOG00000007437	-	100	77.199	ENSNGAG00000015136	A1cf	100	75.570	Nannospalax_galili
ENSPFOG00000007437	-	100	87.805	ENSNBRG00000001712	a1cf	100	87.967	Neolamprologus_brichardi
ENSPFOG00000007437	-	100	77.850	ENSNLEG00000012028	A1CF	100	76.384	Nomascus_leucogenys
ENSPFOG00000007437	-	94	76.207	ENSMEUG00000015909	A1CF	100	73.793	Notamacropus_eugenii
ENSPFOG00000007437	-	88	70.240	ENSOPRG00000010667	A1CF	100	67.318	Ochotona_princeps
ENSPFOG00000007437	-	100	88.293	ENSONIG00000019105	a1cf	100	87.642	Oreochromis_niloticus
ENSPFOG00000007437	-	78	77.019	ENSOANG00000007360	A1CF	99	76.398	Ornithorhynchus_anatinus
ENSPFOG00000007437	-	100	75.407	ENSOCUG00000011587	A1CF	100	73.941	Oryctolagus_cuniculus
ENSPFOG00000007437	-	100	85.505	ENSORLG00000013342	a1cf	100	85.691	Oryzias_latipes
ENSPFOG00000007437	-	100	88.130	ENSORLG00020000586	a1cf	100	88.293	Oryzias_latipes_hni
ENSPFOG00000007437	-	100	88.130	ENSORLG00015018569	a1cf	100	88.293	Oryzias_latipes_hsok
ENSPFOG00000007437	-	100	86.971	ENSOMEG00000013531	a1cf	100	85.668	Oryzias_melastigma
ENSPFOG00000007437	-	100	76.710	ENSOGAG00000012884	A1CF	100	76.059	Otolemur_garnettii
ENSPFOG00000007437	-	100	77.687	ENSOARG00000013695	A1CF	100	76.547	Ovis_aries
ENSPFOG00000007437	-	97	75.630	ENSPPAG00000028115	A1CF	99	79.020	Pan_paniscus
ENSPFOG00000007437	-	100	76.461	ENSPPRG00000012180	A1CF	100	75.570	Panthera_pardus
ENSPFOG00000007437	-	100	76.461	ENSPTIG00000021223	A1CF	100	75.570	Panthera_tigris_altaica
ENSPFOG00000007437	-	100	77.199	ENSPTRG00000002508	A1CF	100	75.733	Pan_troglodytes
ENSPFOG00000007437	-	100	76.221	ENSPANG00000021988	A1CF	100	74.756	Papio_anubis
ENSPFOG00000007437	-	100	81.107	ENSPKIG00000025176	a1cf	100	80.130	Paramormyrops_kingsleyae
ENSPFOG00000007437	-	100	76.547	ENSPSIG00000010318	A1CF	100	74.919	Pelodiscus_sinensis
ENSPFOG00000007437	-	98	69.868	ENSPMGG00000013359	a1cf	99	69.458	Periophthalmus_magnuspinnatus
ENSPFOG00000007437	-	100	76.873	ENSPEMG00000015021	A1cf	100	75.407	Peromyscus_maniculatus_bairdii
ENSPFOG00000007437	-	100	76.221	ENSPCIG00000002175	A1CF	100	74.593	Phascolarctos_cinereus
ENSPFOG00000007437	-	100	98.534	ENSPLAG00000001210	-	100	98.534	Poecilia_latipinna
ENSPFOG00000007437	-	100	98.534	ENSPLAG00000000026	a1cf	100	98.534	Poecilia_latipinna
ENSPFOG00000007437	-	100	89.088	ENSPMEG00000015529	-	100	89.088	Poecilia_mexicana
ENSPFOG00000007437	-	100	87.785	ENSPMEG00000000921	a1cf	100	87.785	Poecilia_mexicana
ENSPFOG00000007437	-	100	98.208	ENSPREG00000016298	a1cf	100	98.208	Poecilia_reticulata
ENSPFOG00000007437	-	100	76.710	ENSPPYG00000002819	A1CF	100	75.244	Pongo_abelii
ENSPFOG00000007437	-	80	59.878	ENSPCAG00000006463	A1CF	79	59.267	Procavia_capensis
ENSPFOG00000007437	-	100	76.384	ENSPCOG00000024172	A1CF	100	75.570	Propithecus_coquereli
ENSPFOG00000007437	-	100	89.268	ENSPNYG00000017944	a1cf	100	89.431	Pundamilia_nyererei
ENSPFOG00000007437	-	100	82.143	ENSPNAG00000007704	a1cf	100	81.331	Pygocentrus_nattereri
ENSPFOG00000007437	-	100	75.896	ENSRNOG00000033195	A1cf	100	74.430	Rattus_norvegicus
ENSPFOG00000007437	-	100	71.591	ENSRBIG00000042892	A1CF	100	72.212	Rhinopithecus_bieti
ENSPFOG00000007437	-	100	77.362	ENSRROG00000041398	A1CF	100	75.896	Rhinopithecus_roxellana
ENSPFOG00000007437	-	100	78.013	ENSSBOG00000021930	A1CF	100	76.547	Saimiri_boliviensis_boliviensis
ENSPFOG00000007437	-	100	77.199	ENSSHAG00000005096	A1CF	100	74.919	Sarcophilus_harrisii
ENSPFOG00000007437	-	100	81.656	ENSSFOG00015011774	a1cf	100	81.006	Scleropages_formosus
ENSPFOG00000007437	-	100	89.448	ENSSMAG00000013271	a1cf	100	89.448	Scophthalmus_maximus
ENSPFOG00000007437	-	100	89.739	ENSSDUG00000013930	a1cf	100	89.414	Seriola_dumerili
ENSPFOG00000007437	-	100	81.759	ENSSLDG00000004290	a1cf	100	81.922	Seriola_lalandi_dorsalis
ENSPFOG00000007437	-	95	68.268	ENSSARG00000005940	A1CF	95	67.753	Sorex_araneus
ENSPFOG00000007437	-	97	75.630	ENSSPUG00000006797	A1CF	95	74.320	Sphenodon_punctatus
ENSPFOG00000007437	-	100	77.850	ENSSSCG00000010431	A1CF	100	76.547	Sus_scrofa
ENSPFOG00000007437	-	100	78.374	ENSTGUG00000005090	A1CF	100	76.585	Taeniopygia_guttata
ENSPFOG00000007437	-	100	87.480	ENSTRUG00000001982	a1cf	100	87.967	Takifugu_rubripes
ENSPFOG00000007437	-	100	86.688	ENSTNIG00000003580	a1cf	100	86.688	Tetraodon_nigroviridis
ENSPFOG00000007437	-	95	72.041	ENSTTRG00000013190	A1CF	94	70.840	Tursiops_truncatus
ENSPFOG00000007437	-	100	76.059	ENSUAMG00000020065	A1CF	100	74.430	Ursus_americanus
ENSPFOG00000007437	-	100	76.710	ENSUMAG00000011162	A1CF	100	75.244	Ursus_maritimus
ENSPFOG00000007437	-	87	73.234	ENSVPAG00000006130	A1CF	86	71.561	Vicugna_pacos
ENSPFOG00000007437	-	100	76.059	ENSVVUG00000002504	A1CF	100	74.430	Vulpes_vulpes
ENSPFOG00000007437	-	100	72.313	ENSXETG00000006611	a1cf	100	71.498	Xenopus_tropicalis
ENSPFOG00000007437	-	100	96.580	ENSXCOG00000003302	a1cf	100	96.580	Xiphophorus_couchianus
ENSPFOG00000007437	-	100	97.883	ENSXMAG00000016703	a1cf	100	97.883	Xiphophorus_maculatus