EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPFOG00000007520 (Gene tree)
Gene ID: 103145430
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Poecilia_formosa
Status: putative
Strand: Minus strand
Length: 6100 bases
Position: chrKI519615.1:2352194-2358293
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPFOP00000007486	RNA_pol_3_Rpc31	PF11705.8	6.4e-28	1	1
ENSPFOP00000029584	RNA_pol_3_Rpc31	PF11705.8	3.1e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPFOT00000007498	-	657	-	ENSPFOP00000007486	218 (aa)	-	A0A087XNY3
ENSPFOT00000027917	-	3846	-	ENSPFOP00000029584	191 (aa)	-	A0A096MDU3

Gene Model

Click here to download ENSPFOG00000007520's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000007520's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPFOG00000007520	-	89	35.859	ENSPFOG00000014955	-	100	39.738

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPFOG00000007520	-	87	77.246	ENSAPOG00000011247	-	83	77.987	Acanthochromis_polyacanthus
ENSPFOG00000007520	-	100	53.782	ENSACIG00000007516	-	100	57.727	Amphilophus_citrinellus
ENSPFOG00000007520	-	100	62.979	ENSAOCG00000024467	-	100	63.404	Amphiprion_ocellaris
ENSPFOG00000007520	-	100	62.979	ENSAPEG00000016584	-	100	63.404	Amphiprion_percula
ENSPFOG00000007520	-	100	63.559	ENSATEG00000002207	-	93	63.559	Anabas_testudineus
ENSPFOG00000007520	-	100	51.883	ENSCSEG00000015309	-	100	53.556	Cynoglossus_semilaevis
ENSPFOG00000007520	-	87	86.228	ENSCVAG00000007423	-	100	70.085	Cyprinodon_variegatus
ENSPFOG00000007520	-	86	57.225	ENSGMOG00000017219	-	100	51.489	Gadus_morhua
ENSPFOG00000007520	-	87	94.578	ENSGAFG00000009490	-	100	75.745	Gambusia_affinis
ENSPFOG00000007520	-	100	56.250	ENSGACG00000010567	-	100	57.083	Gasterosteus_aculeatus
ENSPFOG00000007520	-	100	60.851	ENSHCOG00000019088	-	100	63.761	Hippocampus_comes
ENSPFOG00000007520	-	100	62.979	ENSKMAG00000007413	-	100	62.979	Kryptolebias_marmoratus
ENSPFOG00000007520	-	100	57.265	ENSLBEG00000022698	-	100	57.265	Labrus_bergylta
ENSPFOG00000007520	-	100	69.058	ENSMZEG00005013662	-	100	68.919	Maylandia_zebra
ENSPFOG00000007520	-	100	48.511	ENSMMOG00000005508	-	100	49.362	Mola_mola
ENSPFOG00000007520	-	100	65.929	ENSONIG00000011803	-	98	65.929	Oreochromis_niloticus
ENSPFOG00000007520	-	100	60.776	ENSORLG00000021873	-	94	64.679	Oryzias_latipes
ENSPFOG00000007520	-	100	60.776	ENSORLG00015022482	-	82	64.679	Oryzias_latipes_hsok
ENSPFOG00000007520	-	100	63.303	ENSOMEG00000007659	-	100	63.303	Oryzias_melastigma
ENSPFOG00000007520	-	98	98.404	ENSPLAG00000012172	-	88	98.404	Poecilia_latipinna
ENSPFOG00000007520	-	98	98.936	ENSPMEG00000017122	-	88	98.936	Poecilia_mexicana
ENSPFOG00000007520	-	59	95.575	ENSPREG00000005692	-	100	74.033	Poecilia_reticulata
ENSPFOG00000007520	-	86	75.152	ENSSMAG00000007987	-	74	74.843	Scophthalmus_maximus
ENSPFOG00000007520	-	87	79.042	ENSSDUG00000018449	-	100	65.532	Seriola_dumerili
ENSPFOG00000007520	-	87	78.443	ENSSLDG00000021071	-	100	65.106	Seriola_lalandi_dorsalis
ENSPFOG00000007520	-	100	62.128	ENSSPAG00000004432	-	100	62.553	Stegastes_partitus
ENSPFOG00000007520	-	100	56.838	ENSTRUG00000000973	-	100	59.361	Takifugu_rubripes
ENSPFOG00000007520	-	83	94.340	ENSXMAG00000023321	-	100	76.170	Xiphophorus_maculatus