EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPFOG00000007571 (Gene tree)
Gene ID: 103129196
Gene Symbol: rab18a
Alias: -
Full Name: ras-related protein Rab-18
Gene Type: protein_coding
Species: Poecilia_formosa
Status: putative
Strand: Minus strand
Length: 8761 bases
Position: chrKI520133.1:70553-79313
Accession: 103129196
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPFOP00000007573	MMR_HSR1	PF01926.23	1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPFOT00000007585	-	2446	-	ENSPFOP00000007573	204 (aa)	XP_007540248	A0A087XP70

Gene Model

Click here to download ENSPFOG00000007571's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000007571's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPFOG00000007571	rab18a	80	41.212	ENSPFOG00000004838	rab42a	62	41.212
ENSPFOG00000007571	rab18a	86	35.196	ENSPFOG00000017960	rabl2	80	35.196
ENSPFOG00000007571	rab18a	57	31.034	ENSPFOG00000007842	arl5c	62	31.034
ENSPFOG00000007571	rab18a	81	45.029	ENSPFOG00000019144	-	69	45.294
ENSPFOG00000007571	rab18a	80	38.095	ENSPFOG00000022477	-	77	38.095
ENSPFOG00000007571	rab18a	84	50.867	ENSPFOG00000005479	rab30	84	50.867
ENSPFOG00000007571	rab18a	82	42.604	ENSPFOG00000013182	RAB15	79	42.604
ENSPFOG00000007571	rab18a	79	41.718	ENSPFOG00000013027	rab22a	99	41.718
ENSPFOG00000007571	rab18a	82	35.882	ENSPFOG00000000601	si:ch73-116o1.2	81	35.882
ENSPFOG00000007571	rab18a	79	46.296	ENSPFOG00000024114	-	74	46.296
ENSPFOG00000007571	rab18a	88	43.784	ENSPFOG00000014418	-	90	43.784
ENSPFOG00000007571	rab18a	79	45.062	ENSPFOG00000011310	rab25b	77	45.062
ENSPFOG00000007571	rab18a	96	39.713	ENSPFOG00000011316	rab11al	85	42.391
ENSPFOG00000007571	rab18a	87	39.106	ENSPFOG00000019509	rab6a	84	39.106
ENSPFOG00000007571	rab18a	79	46.296	ENSPFOG00000006159	rab11ba	75	45.732
ENSPFOG00000007571	rab18a	79	36.145	ENSPFOG00000020060	rab9b	82	36.145
ENSPFOG00000007571	rab18a	78	44.375	ENSPFOG00000010632	rab25a	74	44.375
ENSPFOG00000007571	rab18a	80	40.828	ENSPFOG00000000349	rab33ba	70	40.828
ENSPFOG00000007571	rab18a	79	48.765	ENSPFOG00000019821	RAB14	75	48.765
ENSPFOG00000007571	rab18a	79	32.530	ENSPFOG00000006335	dnajc27	61	32.530
ENSPFOG00000007571	rab18a	81	32.530	ENSPFOG00000015499	kras	87	32.530
ENSPFOG00000007571	rab18a	85	34.659	ENSPFOG00000008547	rab34a	57	34.659
ENSPFOG00000007571	rab18a	79	32.927	ENSPFOG00000008678	si:cabz01085950.1	81	32.927
ENSPFOG00000007571	rab18a	71	40.136	ENSPFOG00000009101	-	63	40.136
ENSPFOG00000007571	rab18a	79	46.296	ENSPFOG00000006224	-	74	46.296
ENSPFOG00000007571	rab18a	95	44.928	ENSPFOG00000004786	rab2a	78	51.205
ENSPFOG00000007571	rab18a	73	35.333	ENSPFOG00000008890	rras	72	35.802
ENSPFOG00000007571	rab18a	75	33.974	ENSPFOG00000011444	rab34b	61	33.974
ENSPFOG00000007571	rab18a	77	30.864	ENSPFOG00000001515	rhebl1	85	30.864
ENSPFOG00000007571	rab18a	79	45.679	ENSPFOG00000009284	rab11a	75	45.679
ENSPFOG00000007571	rab18a	84	38.728	ENSPFOG00000004492	RAB39B	81	38.728
ENSPFOG00000007571	rab18a	72	42.105	ENSPFOG00000022360	-	63	42.105
ENSPFOG00000007571	rab18a	95	47.449	ENSPFOG00000001829	rab1ab	90	49.180
ENSPFOG00000007571	rab18a	62	36.220	ENSPFOG00000024387	rras2	74	36.220
ENSPFOG00000007571	rab18a	84	48.256	ENSPFOG00000006655	rab35b	85	48.256
ENSPFOG00000007571	rab18a	75	53.548	ENSPFOG00000013810	zgc:171927	74	51.852
ENSPFOG00000007571	rab18a	80	46.341	ENSPFOG00000004746	si:dkey-16l2.16	78	46.341
ENSPFOG00000007571	rab18a	81	32.530	ENSPFOG00000002595	hrasb	87	32.530
ENSPFOG00000007571	rab18a	80	47.879	ENSPFOG00000001167	-	76	47.879
ENSPFOG00000007571	rab18a	99	84.314	ENSPFOG00000013491	rab18b	93	85.340
ENSPFOG00000007571	rab18a	89	44.022	ENSPFOG00000014630	rab4a	86	44.022
ENSPFOG00000007571	rab18a	83	40.116	ENSPFOG00000004684	-	81	40.116
ENSPFOG00000007571	rab18a	80	43.636	ENSPFOG00000012082	rab5c	81	41.667
ENSPFOG00000007571	rab18a	79	37.952	ENSPFOG00000024704	rab9a	83	37.952
ENSPFOG00000007571	rab18a	90	41.799	ENSPFOG00000011263	rab5aa	86	41.799
ENSPFOG00000007571	rab18a	93	45.361	ENSPFOG00000012594	rab1ba	75	50.617
ENSPFOG00000007571	rab18a	82	44.643	ENSPFOG00000017775	rab15	77	44.643
ENSPFOG00000007571	rab18a	87	44.134	ENSPFOG00000005901	-	78	43.407
ENSPFOG00000007571	rab18a	80	43.713	ENSPFOG00000014499	si:dkey-34d22.5	75	43.713
ENSPFOG00000007571	rab18a	80	37.725	ENSPFOG00000003934	-	81	37.725
ENSPFOG00000007571	rab18a	83	40.351	ENSPFOG00000003742	rab6ba	80	40.351
ENSPFOG00000007571	rab18a	80	43.636	ENSPFOG00000023458	rab5c	81	41.667
ENSPFOG00000007571	rab18a	81	45.029	ENSPFOG00000006314	-	69	45.294
ENSPFOG00000007571	rab18a	75	39.355	ENSPFOG00000015409	si:dkey-13a21.4	76	39.355
ENSPFOG00000007571	rab18a	84	49.711	ENSPFOG00000000498	-	83	49.711
ENSPFOG00000007571	rab18a	80	41.212	ENSPFOG00000012977	rab22a	85	41.212
ENSPFOG00000007571	rab18a	84	37.931	ENSPFOG00000011493	rab23	72	37.931
ENSPFOG00000007571	rab18a	71	44.218	ENSPFOG00000004037	rab33a	52	44.218
ENSPFOG00000007571	rab18a	83	39.766	ENSPFOG00000011424	RAB41	79	39.766
ENSPFOG00000007571	rab18a	79	47.561	ENSPFOG00000001579	rab12	67	47.561
ENSPFOG00000007571	rab18a	79	35.329	ENSPFOG00000013066	RAB29	80	35.329
ENSPFOG00000007571	rab18a	77	32.716	ENSPFOG00000004921	rheb	86	32.716
ENSPFOG00000007571	rab18a	80	39.286	ENSPFOG00000003465	RAB7A	81	39.286

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPFOG00000007571	rab18a	100	95.098	ENSAPOG00000010760	rab18a	94	96.335	Acanthochromis_polyacanthus
ENSPFOG00000007571	rab18a	100	84.314	ENSACIG00000009617	rab18a	93	84.817	Amphilophus_citrinellus
ENSPFOG00000007571	rab18a	100	95.588	ENSAOCG00000016233	rab18a	94	96.859	Amphiprion_ocellaris
ENSPFOG00000007571	rab18a	100	95.588	ENSAPEG00000005392	rab18a	94	96.859	Amphiprion_percula
ENSPFOG00000007571	rab18a	100	93.627	ENSATEG00000021911	rab18a	94	94.764	Anabas_testudineus
ENSPFOG00000007571	rab18a	100	87.317	ENSACAG00000005463	-	94	88.542	Anolis_carolinensis
ENSPFOG00000007571	rab18a	100	95.098	ENSACLG00000011484	rab18a	100	95.098	Astatotilapia_calliptera
ENSPFOG00000007571	rab18a	96	69.154	ENSCPBG00000027619	-	94	70.899	Chrysemys_picta_bellii
ENSPFOG00000007571	rab18a	100	86.893	ENSCPBG00000015839	-	93	87.958	Chrysemys_picta_bellii
ENSPFOG00000007571	rab18a	97	74.874	ENSCING00000006838	-	90	79.444	Ciona_intestinalis
ENSPFOG00000007571	rab18a	97	73.869	ENSCSAVG00000010348	-	94	76.064	Ciona_savignyi
ENSPFOG00000007571	rab18a	100	93.627	ENSCSEG00000011816	rab18a	94	95.288	Cynoglossus_semilaevis
ENSPFOG00000007571	rab18a	100	97.549	ENSCVAG00000015451	rab18a	100	97.549	Cyprinodon_variegatus
ENSPFOG00000007571	rab18a	100	81.463	ENSDARG00000055291	rab18a	92	84.656	Danio_rerio
ENSPFOG00000007571	rab18a	100	89.756	ENSELUG00000003805	rab18a	93	91.623	Esox_lucius
ENSPFOG00000007571	rab18a	100	97.549	ENSFHEG00000019455	rab18a	100	97.549	Fundulus_heteroclitus
ENSPFOG00000007571	rab18a	100	99.020	ENSGAFG00000002790	rab18a	100	99.020	Gambusia_affinis
ENSPFOG00000007571	rab18a	100	86.893	ENSGAGG00000015642	-	93	87.958	Gopherus_agassizii
ENSPFOG00000007571	rab18a	100	95.098	ENSHBUG00000001518	rab18a	100	95.098	Haplochromis_burtoni
ENSPFOG00000007571	rab18a	99	95.074	ENSLBEG00000005861	rab18a	90	95.812	Labrus_bergylta
ENSPFOG00000007571	rab18a	93	88.421	ENSLACG00000009310	rab18a	92	88.421	Latimeria_chalumnae
ENSPFOG00000007571	rab18a	100	88.780	ENSLOCG00000007491	rab18a	93	90.052	Lepisosteus_oculatus
ENSPFOG00000007571	rab18a	100	92.157	ENSMAMG00000014320	rab18a	94	93.717	Mastacembelus_armatus
ENSPFOG00000007571	rab18a	100	94.608	ENSMZEG00005017235	rab18a	94	96.335	Maylandia_zebra
ENSPFOG00000007571	rab18a	100	94.118	ENSMALG00000009813	rab18a	94	95.288	Monopterus_albus
ENSPFOG00000007571	rab18a	100	95.098	ENSNBRG00000013507	rab18a	100	95.098	Neolamprologus_brichardi
ENSPFOG00000007571	rab18a	94	96.354	ENSORLG00000004624	rab18a	94	96.335	Oryzias_latipes
ENSPFOG00000007571	rab18a	94	96.875	ENSORLG00020008333	rab18a	94	96.859	Oryzias_latipes_hni
ENSPFOG00000007571	rab18a	94	95.833	ENSORLG00015004739	rab18a	94	95.812	Oryzias_latipes_hsok
ENSPFOG00000007571	rab18a	100	95.588	ENSOMEG00000020605	rab18a	100	95.588	Oryzias_melastigma
ENSPFOG00000007571	rab18a	100	88.293	ENSPKIG00000009825	rab18a	92	90.476	Paramormyrops_kingsleyae
ENSPFOG00000007571	rab18a	100	93.627	ENSPMGG00000020409	-	94	94.241	Periophthalmus_magnuspinnatus
ENSPFOG00000007571	rab18a	100	100.000	ENSPLAG00000010104	rab18a	100	100.000	Poecilia_latipinna
ENSPFOG00000007571	rab18a	100	100.000	ENSPMEG00000013085	rab18a	100	100.000	Poecilia_mexicana
ENSPFOG00000007571	rab18a	100	100.000	ENSPREG00000005923	rab18a	83	100.000	Poecilia_reticulata
ENSPFOG00000007571	rab18a	100	95.098	ENSPNYG00000007064	rab18a	100	95.098	Pundamilia_nyererei
ENSPFOG00000007571	rab18a	99	80.597	ENSPNAG00000011548	rab18a	95	83.684	Pygocentrus_nattereri
ENSPFOG00000007571	rab18a	100	89.268	ENSSFOG00015017444	rab18a	78	91.579	Scleropages_formosus
ENSPFOG00000007571	rab18a	94	92.746	ENSSMAG00000002969	rab18a	94	92.708	Scophthalmus_maximus
ENSPFOG00000007571	rab18a	94	95.312	ENSSDUG00000003823	rab18a	94	95.288	Seriola_dumerili
ENSPFOG00000007571	rab18a	94	95.312	ENSSLDG00000006977	rab18a	94	95.288	Seriola_lalandi_dorsalis
ENSPFOG00000007571	rab18a	93	88.889	ENSSPUG00000017677	-	92	88.421	Sphenodon_punctatus
ENSPFOG00000007571	rab18a	100	91.176	ENSTRUG00000004984	rab18a	94	92.147	Takifugu_rubripes
ENSPFOG00000007571	rab18a	100	88.350	ENSUMAG00000015574	-	91	89.894	Ursus_maritimus
ENSPFOG00000007571	rab18a	100	86.893	ENSXETG00000004556	rab18	93	89.529	Xenopus_tropicalis
ENSPFOG00000007571	rab18a	100	99.510	ENSXMAG00000024122	rab18a	100	99.510	Xiphophorus_maculatus