EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPFOG00000007701 (Gene tree)
Gene ID: 103156823
Gene Symbol: rbm42
Alias: -
Full Name: RNA binding motif protein 42
Gene Type: protein_coding
Species: Poecilia_formosa
Status: putative
Strand: Plus strand
Length: 10153 bases
Position: chrKI520113.1:409476-419628
Accession: 103156823
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPFOP00000007710	RRM_1	PF00076.22	7.5e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPFOT00000007722	-	4324	-	ENSPFOP00000007710	398 (aa)	XP_007579068	A0A087XPK7

Gene Model

Click here to download ENSPFOG00000007701's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000007701's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPFOG00000007701	rbm42	100	80.583	ENSAPOG00000015109	rbm42	100	79.612	Acanthochromis_polyacanthus
ENSPFOG00000007701	rbm42	100	76.773	ENSACIG00000010771	rbm42	100	75.061	Amphilophus_citrinellus
ENSPFOG00000007701	rbm42	100	81.553	ENSAOCG00000008873	rbm42	100	79.854	Amphiprion_ocellaris
ENSPFOG00000007701	rbm42	100	81.553	ENSAPEG00000012051	rbm42	99	79.854	Amphiprion_percula
ENSPFOG00000007701	rbm42	100	79.853	ENSATEG00000000536	rbm42	100	77.887	Anabas_testudineus
ENSPFOG00000007701	rbm42	100	80.732	ENSACLG00000004988	rbm42	100	80.882	Astatotilapia_calliptera
ENSPFOG00000007701	rbm42	100	71.053	ENSAMXG00000016545	rbm42	100	71.154	Astyanax_mexicanus
ENSPFOG00000007701	rbm42	97	77.805	ENSCSEG00000010248	rbm42	100	76.309	Cynoglossus_semilaevis
ENSPFOG00000007701	rbm42	100	87.745	ENSCVAG00000015589	rbm42	100	88.480	Cyprinodon_variegatus
ENSPFOG00000007701	rbm42	100	65.796	ENSDARG00000039910	rbm42	100	69.024	Danio_rerio
ENSPFOG00000007701	rbm42	100	68.794	ENSELUG00000022403	rbm42	100	68.884	Esox_lucius
ENSPFOG00000007701	rbm42	66	87.313	ENSFHEG00000006764	rbm42	89	89.474	Fundulus_heteroclitus
ENSPFOG00000007701	rbm42	100	71.324	ENSGMOG00000012660	rbm42	100	69.193	Gadus_morhua
ENSPFOG00000007701	rbm42	77	98.046	ENSGAFG00000009059	rbm42	100	98.046	Gambusia_affinis
ENSPFOG00000007701	rbm42	100	75.912	ENSGACG00000004170	rbm42	100	73.659	Gasterosteus_aculeatus
ENSPFOG00000007701	rbm42	100	80.488	ENSHBUG00000011141	rbm42	100	80.637	Haplochromis_burtoni
ENSPFOG00000007701	rbm42	100	77.833	ENSHCOG00000021214	rbm42	100	77.833	Hippocampus_comes
ENSPFOG00000007701	rbm42	100	70.952	ENSIPUG00000022365	rbm42	99	69.928	Ictalurus_punctatus
ENSPFOG00000007701	rbm42	91	81.030	ENSKMAG00000015287	rbm42	99	78.862	Kryptolebias_marmoratus
ENSPFOG00000007701	rbm42	100	76.699	ENSLBEG00000017547	rbm42	100	75.426	Labrus_bergylta
ENSPFOG00000007701	rbm42	85	77.937	ENSLBEG00000004578	-	96	75.575	Labrus_bergylta
ENSPFOG00000007701	rbm42	100	66.981	ENSLOCG00000003368	rbm42	100	64.000	Lepisosteus_oculatus
ENSPFOG00000007701	rbm42	100	77.995	ENSMAMG00000006708	rbm42	100	79.218	Mastacembelus_armatus
ENSPFOG00000007701	rbm42	100	80.732	ENSMZEG00005025234	rbm42	100	80.882	Maylandia_zebra
ENSPFOG00000007701	rbm42	91	81.452	ENSMALG00000015720	rbm42	100	79.032	Monopterus_albus
ENSPFOG00000007701	rbm42	100	81.114	ENSONIG00000008029	rbm42	100	78.935	Oreochromis_niloticus
ENSPFOG00000007701	rbm42	100	61.429	ENSORLG00020022507	rbm42	100	61.667	Oryzias_latipes_hni
ENSPFOG00000007701	rbm42	100	78.676	ENSORLG00015000659	rbm42	100	78.676	Oryzias_latipes_hsok
ENSPFOG00000007701	rbm42	64	80.392	ENSOMEG00000014332	rbm42	94	80.392	Oryzias_melastigma
ENSPFOG00000007701	rbm42	100	71.292	ENSPKIG00000015165	rbm42	100	69.784	Paramormyrops_kingsleyae
ENSPFOG00000007701	rbm42	92	68.651	ENSPMGG00000003569	rbm42	100	98.571	Periophthalmus_magnuspinnatus
ENSPFOG00000007701	rbm42	57	52.991	ENSPMAG00000008633	rbm42	100	47.668	Petromyzon_marinus
ENSPFOG00000007701	rbm42	100	99.749	ENSPLAG00000009405	rbm42	100	99.749	Poecilia_latipinna
ENSPFOG00000007701	rbm42	100	99.749	ENSPMEG00000010375	rbm42	100	99.749	Poecilia_mexicana
ENSPFOG00000007701	rbm42	100	99.749	ENSPREG00000018102	rbm42	100	99.749	Poecilia_reticulata
ENSPFOG00000007701	rbm42	100	80.440	ENSPNYG00000014460	rbm42	100	80.590	Pundamilia_nyererei
ENSPFOG00000007701	rbm42	100	67.126	ENSPNAG00000009961	rbm42	100	69.286	Pygocentrus_nattereri
ENSPFOG00000007701	rbm42	100	71.090	ENSSFOG00015019227	rbm42	100	69.668	Scleropages_formosus
ENSPFOG00000007701	rbm42	100	77.073	ENSSMAG00000011935	rbm42	100	74.878	Scophthalmus_maximus
ENSPFOG00000007701	rbm42	100	81.174	ENSSDUG00000004033	rbm42	100	79.462	Seriola_dumerili
ENSPFOG00000007701	rbm42	100	71.007	ENSSLDG00000009918	rbm42	100	83.529	Seriola_lalandi_dorsalis
ENSPFOG00000007701	rbm42	100	81.220	ENSSPAG00000019871	rbm42	100	79.854	Stegastes_partitus
ENSPFOG00000007701	rbm42	100	73.529	ENSTRUG00000024586	-	76	71.707	Takifugu_rubripes
ENSPFOG00000007701	rbm42	99	63.265	ENSTNIG00000011669	rbm42	100	63.182	Tetraodon_nigroviridis
ENSPFOG00000007701	rbm42	100	59.005	ENSXETG00000017599	rbm42	100	57.957	Xenopus_tropicalis
ENSPFOG00000007701	rbm42	100	97.506	ENSXMAG00000012827	rbm42	100	97.506	Xiphophorus_maculatus