EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPFOG00000007745 (Gene tree)
Gene ID: 103156883
Gene Symbol: safb
Alias: -
Full Name: scaffold attachment factor B
Gene Type: protein_coding
Species: Poecilia_formosa
Status: putative
Strand: Plus strand
Length: 10640 bases
Position: chrKI520117.1:165917-176556
Accession: ZDB-GENE-030131-698
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPFOP00000029207	RRM_1	PF00076.22	4.1e-11	1	1
ENSPFOP00000007884	RRM_1	PF00076.22	4.4e-11	1	1
ENSPFOP00000007884	SAP	PF02037.27	2.7e-09	1	1
ENSPFOP00000029207	SAP	PF02037.27	2.7e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPFOT00000024683	-	3879	-	ENSPFOP00000029207	761 (aa)	-	A0A096MCR6
ENSPFOT00000007896	-	3657	-	ENSPFOP00000007884	753 (aa)	-	A0A087XQ31

Gene Model

Click here to download ENSPFOG00000007745's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000007745's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPFOG00000007745	safb	94	41.507	ENSG00000160633	SAFB	76	65.254	Homo_sapiens
ENSPFOG00000007745	safb	100	69.176	ENSAPOG00000022508	safb	100	69.102	Acanthochromis_polyacanthus
ENSPFOG00000007745	safb	74	40.484	ENSAMEG00000012254	SAFB	95	38.958	Ailuropoda_melanoleuca
ENSPFOG00000007745	safb	100	67.291	ENSACIG00000006247	safb	100	68.335	Amphilophus_citrinellus
ENSPFOG00000007745	safb	100	66.626	ENSAOCG00000006308	safb	100	68.170	Amphiprion_ocellaris
ENSPFOG00000007745	safb	100	69.212	ENSAPEG00000023342	safb	100	69.139	Amphiprion_percula
ENSPFOG00000007745	safb	100	68.052	ENSATEG00000004998	safb	100	67.102	Anabas_testudineus
ENSPFOG00000007745	safb	93	38.514	ENSAPLG00000005780	-	91	43.017	Anas_platyrhynchos
ENSPFOG00000007745	safb	67	41.459	ENSAPLG00000006355	-	94	44.870	Anas_platyrhynchos
ENSPFOG00000007745	safb	61	56.368	ENSACAG00000016893	-	93	44.790	Anolis_carolinensis
ENSPFOG00000007745	safb	94	41.637	ENSANAG00000028821	SAFB	94	39.209	Aotus_nancymaae
ENSPFOG00000007745	safb	100	70.412	ENSACLG00000001926	safb	100	70.662	Astatotilapia_calliptera
ENSPFOG00000007745	safb	100	52.701	ENSAMXG00000018154	safb	99	55.388	Astyanax_mexicanus
ENSPFOG00000007745	safb	99	42.706	ENSBTAG00000007875	SAFB	95	38.958	Bos_taurus
ENSPFOG00000007745	safb	77	48.911	ENSCJAG00000017081	SAFB	93	44.922	Callithrix_jacchus
ENSPFOG00000007745	safb	74	40.549	ENSCAFG00000018803	SAFB	81	39.322	Canis_familiaris
ENSPFOG00000007745	safb	74	40.484	ENSCAFG00020018943	SAFB	94	39.322	Canis_lupus_dingo
ENSPFOG00000007745	safb	99	42.638	ENSCHIG00000007262	SAFB	95	38.864	Capra_hircus
ENSPFOG00000007745	safb	56	43.046	ENSTSYG00000001851	-	88	40.206	Carlito_syrichta
ENSPFOG00000007745	safb	53	51.087	ENSCPOG00000026322	SAFB	71	46.012	Cavia_porcellus
ENSPFOG00000007745	safb	94	41.637	ENSCCAG00000020193	SAFB	94	39.572	Cebus_capucinus
ENSPFOG00000007745	safb	94	41.507	ENSCATG00000029994	SAFB	94	39.435	Cercocebus_atys
ENSPFOG00000007745	safb	72	34.084	ENSCLAG00000007734	SAFB	88	41.287	Chinchilla_lanigera
ENSPFOG00000007745	safb	94	41.000	ENSCSAG00000009949	SAFB	94	39.435	Chlorocebus_sabaeus
ENSPFOG00000007745	safb	59	32.406	ENSCHOG00000003208	SAFB	87	33.940	Choloepus_hoffmanni
ENSPFOG00000007745	safb	92	44.074	ENSCPBG00000010936	-	90	44.132	Chrysemys_picta_bellii
ENSPFOG00000007745	safb	92	44.517	ENSCPBG00000010928	-	95	42.247	Chrysemys_picta_bellii
ENSPFOG00000007745	safb	99	41.141	ENSCANG00000019754	-	93	38.902	Colobus_angolensis_palliatus
ENSPFOG00000007745	safb	94	41.096	ENSCANG00000004774	-	87	42.754	Colobus_angolensis_palliatus
ENSPFOG00000007745	safb	72	39.423	ENSCGRG00001002254	Safb	71	48.408	Cricetulus_griseus_chok1gshd
ENSPFOG00000007745	safb	99	65.167	ENSCSEG00000019870	safb	100	63.273	Cynoglossus_semilaevis
ENSPFOG00000007745	safb	100	84.544	ENSCVAG00000002226	safb	100	84.544	Cyprinodon_variegatus
ENSPFOG00000007745	safb	97	56.671	ENSDARG00000020467	safb	99	55.057	Danio_rerio
ENSPFOG00000007745	safb	98	40.487	ENSDNOG00000015746	SAFB	95	38.676	Dasypus_novemcinctus
ENSPFOG00000007745	safb	50	54.331	ENSDORG00000016200	Safb	72	44.848	Dipodomys_ordii
ENSPFOG00000007745	safb	72	40.864	ENSEASG00005023019	SAFB	97	38.654	Equus_asinus_asinus
ENSPFOG00000007745	safb	72	41.000	ENSECAG00000018659	SAFB	87	38.614	Equus_caballus
ENSPFOG00000007745	safb	99	58.343	ENSELUG00000022327	safb	99	57.541	Esox_lucius
ENSPFOG00000007745	safb	74	40.323	ENSFCAG00000011835	SAFB	94	39.209	Felis_catus
ENSPFOG00000007745	safb	72	41.569	ENSFALG00000013882	-	82	44.458	Ficedula_albicollis
ENSPFOG00000007745	safb	64	40.035	ENSFALG00000013881	-	68	48.475	Ficedula_albicollis
ENSPFOG00000007745	safb	94	40.411	ENSFDAG00000020306	SAFB	72	54.032	Fukomys_damarensis
ENSPFOG00000007745	safb	100	87.664	ENSFHEG00000004219	safb	100	87.664	Fundulus_heteroclitus
ENSPFOG00000007745	safb	100	59.353	ENSGMOG00000014280	safb	100	60.287	Gadus_morhua
ENSPFOG00000007745	safb	99	40.065	ENSGALG00000013365	-	96	43.048	Gallus_gallus
ENSPFOG00000007745	safb	72	42.155	ENSGALG00000001948	-	89	45.711	Gallus_gallus
ENSPFOG00000007745	safb	100	93.214	ENSGAFG00000016162	safb	100	93.214	Gambusia_affinis
ENSPFOG00000007745	safb	100	63.446	ENSGACG00000011385	safb	100	63.958	Gasterosteus_aculeatus
ENSPFOG00000007745	safb	71	49.344	ENSGAGG00000017702	-	87	50.788	Gopherus_agassizii
ENSPFOG00000007745	safb	99	46.644	ENSGAGG00000008424	-	93	46.005	Gopherus_agassizii
ENSPFOG00000007745	safb	94	41.627	ENSGGOG00000015109	SAFB	94	39.432	Gorilla_gorilla
ENSPFOG00000007745	safb	100	66.709	ENSHBUG00000009218	safb	100	65.829	Haplochromis_burtoni
ENSPFOG00000007745	safb	72	38.336	ENSHGLG00000015883	SAFB	88	39.763	Heterocephalus_glaber_female
ENSPFOG00000007745	safb	78	52.846	ENSHGLG00100004228	SAFB	66	52.033	Heterocephalus_glaber_male
ENSPFOG00000007745	safb	93	61.488	ENSHCOG00000001705	safb	99	61.488	Hippocampus_comes
ENSPFOG00000007745	safb	99	57.297	ENSIPUG00000024869	safb2	99	57.601	Ictalurus_punctatus
ENSPFOG00000007745	safb	67	37.931	ENSSTOG00000002783	SAFB	91	39.039	Ictidomys_tridecemlineatus
ENSPFOG00000007745	safb	100	72.506	ENSKMAG00000022308	safb	100	73.114	Kryptolebias_marmoratus
ENSPFOG00000007745	safb	100	67.176	ENSLBEG00000006015	safb	100	67.059	Labrus_bergylta
ENSPFOG00000007745	safb	72	41.452	ENSLACG00000018090	SAFB	97	46.364	Latimeria_chalumnae
ENSPFOG00000007745	safb	100	55.119	ENSLOCG00000003613	safb	99	55.504	Lepisosteus_oculatus
ENSPFOG00000007745	safb	99	41.647	ENSLAFG00000003840	SAFB	95	39.391	Loxodonta_africana
ENSPFOG00000007745	safb	94	41.507	ENSMFAG00000003885	SAFB	94	39.548	Macaca_fascicularis
ENSPFOG00000007745	safb	99	37.415	ENSMMUG00000017970	SAFB	94	39.474	Macaca_mulatta
ENSPFOG00000007745	safb	94	40.359	ENSMNEG00000035637	SAFB	94	38.138	Macaca_nemestrina
ENSPFOG00000007745	safb	69	39.791	ENSMLEG00000038637	SAFB	94	37.066	Mandrillus_leucophaeus
ENSPFOG00000007745	safb	100	67.102	ENSMAMG00000003357	safb	91	65.914	Mastacembelus_armatus
ENSPFOG00000007745	safb	100	70.537	ENSMZEG00005009120	safb	100	70.787	Maylandia_zebra
ENSPFOG00000007745	safb	68	42.970	ENSMGAG00000001101	-	67	48.689	Meleagris_gallopavo
ENSPFOG00000007745	safb	72	42.951	ENSMGAG00000001051	-	77	57.025	Meleagris_gallopavo
ENSPFOG00000007745	safb	73	41.447	ENSMICG00000008739	-	94	39.503	Microcebus_murinus
ENSPFOG00000007745	safb	91	38.349	ENSMICG00000046795	-	70	60.870	Microcebus_murinus
ENSPFOG00000007745	safb	93	40.940	ENSMODG00000001236	SAFB	89	40.850	Monodelphis_domestica
ENSPFOG00000007745	safb	100	67.488	ENSMALG00000020330	safb	100	66.901	Monopterus_albus
ENSPFOG00000007745	safb	74	40.226	ENSMPUG00000006123	SAFB	88	39.008	Mustela_putorius_furo
ENSPFOG00000007745	safb	99	42.617	ENSMLUG00000001081	SAFB	94	39.233	Myotis_lucifugus
ENSPFOG00000007745	safb	60	52.778	ENSNGAG00000019882	Safb	68	52.846	Nannospalax_galili
ENSPFOG00000007745	safb	93	41.717	ENSNLEG00000013551	SAFB	97	39.852	Nomascus_leucogenys
ENSPFOG00000007745	safb	67	39.123	ENSOPRG00000011561	-	98	37.181	Ochotona_princeps
ENSPFOG00000007745	safb	72	39.320	ENSODEG00000014838	SAFB	88	40.047	Octodon_degus
ENSPFOG00000007745	safb	100	67.933	ENSONIG00000002318	safb	100	67.933	Oreochromis_niloticus
ENSPFOG00000007745	safb	90	36.607	ENSOCUG00000014628	SAFB	64	41.423	Oryctolagus_cuniculus
ENSPFOG00000007745	safb	98	68.045	ENSORLG00000016989	safb	100	67.442	Oryzias_latipes
ENSPFOG00000007745	safb	98	64.774	ENSORLG00020000404	safb	100	64.484	Oryzias_latipes_hni
ENSPFOG00000007745	safb	98	68.045	ENSORLG00015010733	safb	100	67.853	Oryzias_latipes_hsok
ENSPFOG00000007745	safb	100	68.505	ENSOMEG00000009066	safb	100	68.505	Oryzias_melastigma
ENSPFOG00000007745	safb	72	42.167	ENSOGAG00000027769	SAFB	92	40.183	Otolemur_garnettii
ENSPFOG00000007745	safb	99	39.176	ENSOARG00000007662	-	95	38.095	Ovis_aries
ENSPFOG00000007745	safb	86	37.517	ENSOARG00000007856	-	98	35.967	Ovis_aries
ENSPFOG00000007745	safb	94	41.627	ENSPPAG00000035129	SAFB	94	39.435	Pan_paniscus
ENSPFOG00000007745	safb	74	40.323	ENSPPRG00000017197	SAFB	94	39.209	Panthera_pardus
ENSPFOG00000007745	safb	94	41.627	ENSPTRG00000010335	SAFB	94	39.435	Pan_troglodytes
ENSPFOG00000007745	safb	94	41.219	ENSPANG00000007770	SAFB	94	39.842	Papio_anubis
ENSPFOG00000007745	safb	99	55.086	ENSPKIG00000009902	safb	99	55.950	Paramormyrops_kingsleyae
ENSPFOG00000007745	safb	99	44.005	ENSPSIG00000009367	-	94	43.575	Pelodiscus_sinensis
ENSPFOG00000007745	safb	99	43.894	ENSPSIG00000011679	-	97	43.322	Pelodiscus_sinensis
ENSPFOG00000007745	safb	100	95.437	ENSPLAG00000001614	safb	100	95.437	Poecilia_latipinna
ENSPFOG00000007745	safb	100	99.602	ENSPMEG00000021023	safb	100	99.602	Poecilia_mexicana
ENSPFOG00000007745	safb	100	96.349	ENSPREG00000012496	safb	100	96.349	Poecilia_reticulata
ENSPFOG00000007745	safb	94	40.869	ENSPPYG00000009428	SAFB	94	39.185	Pongo_abelii
ENSPFOG00000007745	safb	99	39.952	ENSPCAG00000006475	SAFB	94	36.333	Procavia_capensis
ENSPFOG00000007745	safb	99	41.078	ENSPCOG00000014090	SAFB	93	36.429	Propithecus_coquereli
ENSPFOG00000007745	safb	91	42.050	ENSPVAG00000004913	SAFB	69	51.754	Pteropus_vampyrus
ENSPFOG00000007745	safb	99	55.798	ENSPNAG00000021838	safb	99	57.683	Pygocentrus_nattereri
ENSPFOG00000007745	safb	94	40.696	ENSRBIG00000042509	SAFB	86	40.544	Rhinopithecus_bieti
ENSPFOG00000007745	safb	94	41.388	ENSRROG00000029278	SAFB	94	39.616	Rhinopithecus_roxellana
ENSPFOG00000007745	safb	94	41.637	ENSSBOG00000026291	SAFB	94	39.459	Saimiri_boliviensis_boliviensis
ENSPFOG00000007745	safb	99	56.651	ENSSFOG00015008156	safb	99	57.061	Scleropages_formosus
ENSPFOG00000007745	safb	100	67.180	ENSSMAG00000009316	safb	100	68.246	Scophthalmus_maximus
ENSPFOG00000007745	safb	100	68.507	ENSSDUG00000009652	safb	100	69.762	Seriola_dumerili
ENSPFOG00000007745	safb	100	68.182	ENSSLDG00000001670	safb	100	67.703	Seriola_lalandi_dorsalis
ENSPFOG00000007745	safb	67	38.732	ENSSARG00000010475	SAFB	91	37.009	Sorex_araneus
ENSPFOG00000007745	safb	61	40.733	ENSSPUG00000009747	-	95	39.821	Sphenodon_punctatus
ENSPFOG00000007745	safb	98	66.961	ENSSPAG00000015682	safb	99	66.625	Stegastes_partitus
ENSPFOG00000007745	safb	99	38.785	ENSSSCG00000013522	SAFB	93	41.645	Sus_scrofa
ENSPFOG00000007745	safb	76	52.672	ENSTGUG00000000502	-	93	44.953	Taeniopygia_guttata
ENSPFOG00000007745	safb	100	68.803	ENSTRUG00000003567	safb	100	67.231	Takifugu_rubripes
ENSPFOG00000007745	safb	99	55.896	ENSTNIG00000015470	safb	100	57.393	Tetraodon_nigroviridis
ENSPFOG00000007745	safb	86	72.222	ENSTTRG00000013588	SAFB	81	72.222	Tursiops_truncatus
ENSPFOG00000007745	safb	59	53.629	ENSUMAG00000009734	SAFB	80	39.502	Ursus_maritimus
ENSPFOG00000007745	safb	51	50.570	ENSVPAG00000012043	SAFB	61	46.765	Vicugna_pacos
ENSPFOG00000007745	safb	74	40.549	ENSVVUG00000013720	SAFB	81	39.459	Vulpes_vulpes
ENSPFOG00000007745	safb	60	62.500	ENSXETG00000008755	safb	69	67.164	Xenopus_tropicalis
ENSPFOG00000007745	safb	100	97.211	ENSXMAG00000003458	safb	100	97.211	Xiphophorus_maculatus