EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPFOG00000008100 (Gene tree)
Gene ID: 103156719
Gene Symbol: trnau1apa
Alias: -
Full Name: tRNA selenocysteine 1 associated protein 1
Gene Type: protein_coding
Species: Poecilia_formosa
Status: putative
Strand: Minus strand
Length: 10245 bases
Position: chrKI520105.1:196126-206370
Accession: 103156719
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPFOP00000008087	RRM_1	PF00076.22	1.1e-26	1	2
ENSPFOP00000008087	RRM_1	PF00076.22	1.1e-26	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPFOT00000008099	-	2710	-	ENSPFOP00000008087	308 (aa)	XP_007578931	A0A087XQN4

Gene Model

Click here to download ENSPFOG00000008100's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000008100's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPFOG00000008100	trnau1apa	70	31.056	ENSPFOG00000002682	pabpc4	57	31.447
ENSPFOG00000008100	trnau1apa	93	45.277	ENSPFOG00000003938	trnau1apb	95	44.156

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPFOG00000008100	trnau1apa	93	57.639	ENSG00000180098	TRNAU1AP	95	56.944	Homo_sapiens
ENSPFOG00000008100	trnau1apa	99	82.736	ENSAPOG00000007148	TRNAU1AP	99	82.026	Acanthochromis_polyacanthus
ENSPFOG00000008100	trnau1apa	93	57.986	ENSAMEG00000011367	TRNAU1AP	95	57.292	Ailuropoda_melanoleuca
ENSPFOG00000008100	trnau1apa	91	92.135	ENSACIG00000004161	trnau1apa	93	92.135	Amphilophus_citrinellus
ENSPFOG00000008100	trnau1apa	99	84.314	ENSAOCG00000008056	trnau1apa	99	82.353	Amphiprion_ocellaris
ENSPFOG00000008100	trnau1apa	99	84.314	ENSAPEG00000008868	trnau1apa	99	82.353	Amphiprion_percula
ENSPFOG00000008100	trnau1apa	99	80.255	ENSATEG00000012140	trnau1apa	99	79.936	Anabas_testudineus
ENSPFOG00000008100	trnau1apa	92	54.861	ENSAPLG00000002606	TRNAU1AP	99	56.250	Anas_platyrhynchos
ENSPFOG00000008100	trnau1apa	92	47.552	ENSACAG00000003995	-	94	46.875	Anolis_carolinensis
ENSPFOG00000008100	trnau1apa	75	37.179	ENSACAG00000004205	-	86	37.247	Anolis_carolinensis
ENSPFOG00000008100	trnau1apa	93	57.639	ENSANAG00000018976	TRNAU1AP	95	56.944	Aotus_nancymaae
ENSPFOG00000008100	trnau1apa	99	83.660	ENSACLG00000018515	trnau1apa	99	82.353	Astatotilapia_calliptera
ENSPFOG00000008100	trnau1apa	99	51.768	ENSAMXG00000013750	trnau1apa	97	52.244	Astyanax_mexicanus
ENSPFOG00000008100	trnau1apa	94	69.565	ENSAMXG00000029240	-	100	69.565	Astyanax_mexicanus
ENSPFOG00000008100	trnau1apa	93	57.292	ENSBTAG00000010393	TRNAU1AP	95	56.597	Bos_taurus
ENSPFOG00000008100	trnau1apa	93	57.639	ENSCJAG00000009717	TRNAU1AP	87	65.753	Callithrix_jacchus
ENSPFOG00000008100	trnau1apa	93	57.639	ENSCAFG00000011735	TRNAU1AP	95	56.944	Canis_familiaris
ENSPFOG00000008100	trnau1apa	93	57.639	ENSCAFG00020023584	TRNAU1AP	95	56.944	Canis_lupus_dingo
ENSPFOG00000008100	trnau1apa	93	57.292	ENSCHIG00000023215	TRNAU1AP	95	56.597	Capra_hircus
ENSPFOG00000008100	trnau1apa	93	57.639	ENSTSYG00000003506	TRNAU1AP	87	65.753	Carlito_syrichta
ENSPFOG00000008100	trnau1apa	93	57.639	ENSCPOG00000001925	TRNAU1AP	95	56.944	Cavia_porcellus
ENSPFOG00000008100	trnau1apa	93	57.639	ENSCCAG00000037506	TRNAU1AP	87	65.753	Cebus_capucinus
ENSPFOG00000008100	trnau1apa	93	57.639	ENSCATG00000044617	TRNAU1AP	87	65.753	Cercocebus_atys
ENSPFOG00000008100	trnau1apa	93	57.639	ENSCLAG00000008223	TRNAU1AP	95	56.944	Chinchilla_lanigera
ENSPFOG00000008100	trnau1apa	93	57.639	ENSCSAG00000001014	TRNAU1AP	95	56.944	Chlorocebus_sabaeus
ENSPFOG00000008100	trnau1apa	90	55.957	ENSCPBG00000000121	TRNAU1AP	96	56.429	Chrysemys_picta_bellii
ENSPFOG00000008100	trnau1apa	71	32.780	ENSCSAVG00000011781	-	84	50.000	Ciona_savignyi
ENSPFOG00000008100	trnau1apa	93	50.000	ENSCANG00000041949	TRNAU1AP	93	51.667	Colobus_angolensis_palliatus
ENSPFOG00000008100	trnau1apa	93	57.639	ENSCGRG00001004713	Trnau1ap	95	56.944	Cricetulus_griseus_chok1gshd
ENSPFOG00000008100	trnau1apa	93	57.639	ENSCGRG00000014532	Trnau1ap	95	56.944	Cricetulus_griseus_crigri
ENSPFOG00000008100	trnau1apa	99	70.288	ENSCSEG00000006663	trnau1apa	89	88.148	Cynoglossus_semilaevis
ENSPFOG00000008100	trnau1apa	99	87.622	ENSCVAG00000018069	trnau1apa	99	87.622	Cyprinodon_variegatus
ENSPFOG00000008100	trnau1apa	99	49.032	ENSDARG00000101323	trnau1apa	95	47.267	Danio_rerio
ENSPFOG00000008100	trnau1apa	57	58.192	ENSDNOG00000047959	-	89	58.721	Dasypus_novemcinctus
ENSPFOG00000008100	trnau1apa	93	57.639	ENSDNOG00000033009	TRNAU1AP	95	56.944	Dasypus_novemcinctus
ENSPFOG00000008100	trnau1apa	93	54.545	ENSDORG00000006349	Trnau1ap	97	58.403	Dipodomys_ordii
ENSPFOG00000008100	trnau1apa	93	36.308	FBgn0031607	CG15440	96	34.259	Drosophila_melanogaster
ENSPFOG00000008100	trnau1apa	79	53.878	ENSETEG00000012594	TRNAU1AP	94	53.061	Echinops_telfairi
ENSPFOG00000008100	trnau1apa	61	46.591	ENSEBUG00000006349	-	56	46.591	Eptatretus_burgeri
ENSPFOG00000008100	trnau1apa	93	57.639	ENSEASG00005010062	TRNAU1AP	90	65.753	Equus_asinus_asinus
ENSPFOG00000008100	trnau1apa	93	57.639	ENSECAG00000012980	TRNAU1AP	90	65.753	Equus_caballus
ENSPFOG00000008100	trnau1apa	93	80.682	ENSELUG00000022790	-	96	80.682	Esox_lucius
ENSPFOG00000008100	trnau1apa	99	67.638	ENSELUG00000017686	trnau1apa	99	68.285	Esox_lucius
ENSPFOG00000008100	trnau1apa	93	57.639	ENSFCAG00000013401	TRNAU1AP	95	56.944	Felis_catus
ENSPFOG00000008100	trnau1apa	90	55.596	ENSFALG00000001371	TRNAU1AP	96	56.071	Ficedula_albicollis
ENSPFOG00000008100	trnau1apa	93	57.639	ENSFDAG00000018599	TRNAU1AP	95	56.944	Fukomys_damarensis
ENSPFOG00000008100	trnau1apa	78	91.429	ENSFHEG00000018232	trnau1apa	89	87.361	Fundulus_heteroclitus
ENSPFOG00000008100	trnau1apa	99	63.666	ENSGMOG00000016508	trnau1apa	99	63.023	Gadus_morhua
ENSPFOG00000008100	trnau1apa	93	55.556	ENSGALG00000001310	-	95	56.357	Gallus_gallus
ENSPFOG00000008100	trnau1apa	69	37.273	ENSGALG00000012721	C2H6orf52	79	37.555	Gallus_gallus
ENSPFOG00000008100	trnau1apa	85	97.338	ENSGAFG00000004928	trnau1apa	99	97.338	Gambusia_affinis
ENSPFOG00000008100	trnau1apa	99	81.699	ENSGACG00000001443	trnau1apa	99	81.699	Gasterosteus_aculeatus
ENSPFOG00000008100	trnau1apa	90	55.596	ENSGAGG00000004940	TRNAU1AP	96	56.429	Gopherus_agassizii
ENSPFOG00000008100	trnau1apa	93	57.639	ENSGGOG00000003511	TRNAU1AP	87	65.753	Gorilla_gorilla
ENSPFOG00000008100	trnau1apa	99	94.074	ENSHBUG00000002510	trnau1apa	93	94.074	Haplochromis_burtoni
ENSPFOG00000008100	trnau1apa	93	57.639	ENSHGLG00000010380	TRNAU1AP	95	56.944	Heterocephalus_glaber_female
ENSPFOG00000008100	trnau1apa	93	55.556	ENSHGLG00100012699	TRNAU1AP	95	54.861	Heterocephalus_glaber_male
ENSPFOG00000008100	trnau1apa	99	74.760	ENSHCOG00000014770	trnau1apa	99	72.524	Hippocampus_comes
ENSPFOG00000008100	trnau1apa	93	57.639	ENSSTOG00000000079	TRNAU1AP	95	56.944	Ictidomys_tridecemlineatus
ENSPFOG00000008100	trnau1apa	93	57.639	ENSJJAG00000010128	Trnau1ap	95	56.944	Jaculus_jaculus
ENSPFOG00000008100	trnau1apa	99	86.601	ENSKMAG00000001230	trnau1apa	99	86.601	Kryptolebias_marmoratus
ENSPFOG00000008100	trnau1apa	99	76.972	ENSLBEG00000011683	trnau1apa	99	76.752	Labrus_bergylta
ENSPFOG00000008100	trnau1apa	94	51.211	ENSLACG00000005541	TRNAU1AP	95	52.055	Latimeria_chalumnae
ENSPFOG00000008100	trnau1apa	94	59.310	ENSLOCG00000004041	trnau1apa	96	59.310	Lepisosteus_oculatus
ENSPFOG00000008100	trnau1apa	93	57.986	ENSLAFG00000007628	TRNAU1AP	95	57.292	Loxodonta_africana
ENSPFOG00000008100	trnau1apa	93	57.639	ENSMFAG00000043751	TRNAU1AP	87	65.753	Macaca_fascicularis
ENSPFOG00000008100	trnau1apa	93	57.639	ENSMMUG00000006561	TRNAU1AP	95	56.944	Macaca_mulatta
ENSPFOG00000008100	trnau1apa	93	57.639	ENSMNEG00000044201	TRNAU1AP	87	65.753	Macaca_nemestrina
ENSPFOG00000008100	trnau1apa	93	57.639	ENSMLEG00000015649	TRNAU1AP	87	65.753	Mandrillus_leucophaeus
ENSPFOG00000008100	trnau1apa	99	81.350	ENSMAMG00000001247	trnau1apa	99	79.100	Mastacembelus_armatus
ENSPFOG00000008100	trnau1apa	99	83.660	ENSMZEG00005017722	trnau1apa	99	82.353	Maylandia_zebra
ENSPFOG00000008100	trnau1apa	91	56.584	ENSMGAG00000002105	TRNAU1AP	96	55.872	Meleagris_gallopavo
ENSPFOG00000008100	trnau1apa	93	57.639	ENSMICG00000008386	TRNAU1AP	87	65.753	Microcebus_murinus
ENSPFOG00000008100	trnau1apa	93	57.639	ENSMOCG00000011189	Trnau1ap	95	56.944	Microtus_ochrogaster
ENSPFOG00000008100	trnau1apa	99	67.097	ENSMMOG00000012107	trnau1apa	99	67.097	Mola_mola
ENSPFOG00000008100	trnau1apa	93	56.597	ENSMODG00000010927	TRNAU1AP	95	56.014	Monodelphis_domestica
ENSPFOG00000008100	trnau1apa	99	82.524	ENSMALG00000016778	trnau1apa	99	82.524	Monopterus_albus
ENSPFOG00000008100	trnau1apa	93	57.639	MGP_CAROLIEiJ_G0026563	Trnau1ap	92	62.025	Mus_caroli
ENSPFOG00000008100	trnau1apa	93	57.639	ENSMUSG00000028898	Trnau1ap	92	62.025	Mus_musculus
ENSPFOG00000008100	trnau1apa	93	57.639	MGP_PahariEiJ_G0028896	Trnau1ap	84	72.881	Mus_pahari
ENSPFOG00000008100	trnau1apa	93	57.639	MGP_SPRETEiJ_G0027544	Trnau1ap	92	62.025	Mus_spretus
ENSPFOG00000008100	trnau1apa	93	57.986	ENSMPUG00000015511	TRNAU1AP	95	57.292	Mustela_putorius_furo
ENSPFOG00000008100	trnau1apa	93	57.639	ENSMLUG00000012586	TRNAU1AP	95	56.944	Myotis_lucifugus
ENSPFOG00000008100	trnau1apa	93	57.639	ENSNGAG00000015881	Trnau1ap	84	68.148	Nannospalax_galili
ENSPFOG00000008100	trnau1apa	99	70.227	ENSNBRG00000001758	trnau1apa	99	68.932	Neolamprologus_brichardi
ENSPFOG00000008100	trnau1apa	93	57.639	ENSNLEG00000009822	TRNAU1AP	87	65.753	Nomascus_leucogenys
ENSPFOG00000008100	trnau1apa	91	56.940	ENSMEUG00000006117	TRNAU1AP	96	55.516	Notamacropus_eugenii
ENSPFOG00000008100	trnau1apa	52	60.920	ENSOPRG00000007084	-	55	60.920	Ochotona_princeps
ENSPFOG00000008100	trnau1apa	93	57.639	ENSODEG00000002970	TRNAU1AP	95	56.944	Octodon_degus
ENSPFOG00000008100	trnau1apa	80	87.854	ENSONIG00000004715	trnau1apa	97	86.235	Oreochromis_niloticus
ENSPFOG00000008100	trnau1apa	98	42.053	ENSOANG00000005325	-	95	43.448	Ornithorhynchus_anatinus
ENSPFOG00000008100	trnau1apa	93	47.569	ENSOCUG00000002353	-	95	47.222	Oryctolagus_cuniculus
ENSPFOG00000008100	trnau1apa	93	56.250	ENSOCUG00000011704	-	95	55.556	Oryctolagus_cuniculus
ENSPFOG00000008100	trnau1apa	85	45.627	ENSOCUG00000006834	-	97	45.247	Oryctolagus_cuniculus
ENSPFOG00000008100	trnau1apa	99	82.353	ENSORLG00000010428	trnau1apa	99	82.353	Oryzias_latipes
ENSPFOG00000008100	trnau1apa	99	82.353	ENSORLG00020000926	trnau1ap	99	82.353	Oryzias_latipes_hni
ENSPFOG00000008100	trnau1apa	99	82.353	ENSORLG00015009858	trnau1ap	99	82.353	Oryzias_latipes_hsok
ENSPFOG00000008100	trnau1apa	99	82.680	ENSOMEG00000007873	trnau1apa	99	82.680	Oryzias_melastigma
ENSPFOG00000008100	trnau1apa	93	57.639	ENSOGAG00000002274	TRNAU1AP	95	56.944	Otolemur_garnettii
ENSPFOG00000008100	trnau1apa	93	57.292	ENSOARG00000002843	TRNAU1AP	95	56.597	Ovis_aries
ENSPFOG00000008100	trnau1apa	93	57.639	ENSPPAG00000033927	TRNAU1AP	87	65.753	Pan_paniscus
ENSPFOG00000008100	trnau1apa	93	57.639	ENSPPRG00000004416	TRNAU1AP	95	56.944	Panthera_pardus
ENSPFOG00000008100	trnau1apa	93	57.639	ENSPTIG00000016677	TRNAU1AP	95	56.944	Panthera_tigris_altaica
ENSPFOG00000008100	trnau1apa	86	50.936	ENSPTRG00000000434	-	90	51.311	Pan_troglodytes
ENSPFOG00000008100	trnau1apa	93	57.639	ENSPANG00000016019	TRNAU1AP	87	65.753	Papio_anubis
ENSPFOG00000008100	trnau1apa	93	57.931	ENSPKIG00000015511	trnau1apa	93	55.903	Paramormyrops_kingsleyae
ENSPFOG00000008100	trnau1apa	92	78.409	ENSPKIG00000022205	-	94	78.409	Paramormyrops_kingsleyae
ENSPFOG00000008100	trnau1apa	90	56.679	ENSPSIG00000006864	TRNAU1AP	96	56.429	Pelodiscus_sinensis
ENSPFOG00000008100	trnau1apa	97	68.439	ENSPMGG00000023893	trnau1apa	99	65.359	Periophthalmus_magnuspinnatus
ENSPFOG00000008100	trnau1apa	93	57.292	ENSPEMG00000007877	Trnau1ap	95	56.597	Peromyscus_maniculatus_bairdii
ENSPFOG00000008100	trnau1apa	55	54.335	ENSPMAG00000000592	trnau1apa	95	54.335	Petromyzon_marinus
ENSPFOG00000008100	trnau1apa	74	51.528	ENSPMAG00000005934	trnau1apa	96	49.782	Petromyzon_marinus
ENSPFOG00000008100	trnau1apa	96	100.000	ENSPLAG00000010236	trnau1apa	100	100.000	Poecilia_latipinna
ENSPFOG00000008100	trnau1apa	99	98.046	ENSPMEG00000016387	trnau1apa	97	98.046	Poecilia_mexicana
ENSPFOG00000008100	trnau1apa	88	92.391	ENSPREG00000019821	trnau1apa	99	92.391	Poecilia_reticulata
ENSPFOG00000008100	trnau1apa	84	46.743	ENSPPYG00000001639	-	95	48.276	Pongo_abelii
ENSPFOG00000008100	trnau1apa	93	57.639	ENSPCOG00000027712	-	95	56.944	Propithecus_coquereli
ENSPFOG00000008100	trnau1apa	92	45.423	ENSPCOG00000023470	-	95	44.366	Propithecus_coquereli
ENSPFOG00000008100	trnau1apa	93	57.639	ENSPVAG00000017214	TRNAU1AP	95	56.944	Pteropus_vampyrus
ENSPFOG00000008100	trnau1apa	99	82.315	ENSPNYG00000010130	trnau1apa	99	84.615	Pundamilia_nyererei
ENSPFOG00000008100	trnau1apa	99	51.466	ENSPNAG00000024905	trnau1apa	97	51.466	Pygocentrus_nattereri
ENSPFOG00000008100	trnau1apa	92	53.873	ENSRNOG00000055344	Trnau1ap	92	53.521	Rattus_norvegicus
ENSPFOG00000008100	trnau1apa	93	57.639	ENSRBIG00000029083	TRNAU1AP	87	65.753	Rhinopithecus_bieti
ENSPFOG00000008100	trnau1apa	93	57.639	ENSRROG00000029128	TRNAU1AP	87	65.753	Rhinopithecus_roxellana
ENSPFOG00000008100	trnau1apa	93	57.639	ENSSBOG00000021299	TRNAU1AP	87	65.753	Saimiri_boliviensis_boliviensis
ENSPFOG00000008100	trnau1apa	93	56.944	ENSSHAG00000008108	TRNAU1AP	95	56.357	Sarcophilus_harrisii
ENSPFOG00000008100	trnau1apa	99	77.023	ENSSMAG00000020851	trnau1apa	99	76.375	Scophthalmus_maximus
ENSPFOG00000008100	trnau1apa	99	80.645	ENSSDUG00000011734	trnau1apa	99	80.000	Seriola_dumerili
ENSPFOG00000008100	trnau1apa	99	65.359	ENSSLDG00000012101	trnau1apa	99	61.438	Seriola_lalandi_dorsalis
ENSPFOG00000008100	trnau1apa	91	57.651	ENSSARG00000007536	TRNAU1AP	96	56.940	Sorex_araneus
ENSPFOG00000008100	trnau1apa	63	49.231	ENSSPUG00000010415	-	94	49.444	Sphenodon_punctatus
ENSPFOG00000008100	trnau1apa	98	53.135	ENSSPUG00000010400	-	95	54.514	Sphenodon_punctatus
ENSPFOG00000008100	trnau1apa	99	83.660	ENSSPAG00000005029	trnau1apa	99	83.007	Stegastes_partitus
ENSPFOG00000008100	trnau1apa	93	57.639	ENSSSCG00000030284	TRNAU1AP	95	56.944	Sus_scrofa
ENSPFOG00000008100	trnau1apa	91	56.940	ENSTGUG00000000735	-	96	56.690	Taeniopygia_guttata
ENSPFOG00000008100	trnau1apa	69	38.249	ENSTGUG00000005908	-	99	39.437	Taeniopygia_guttata
ENSPFOG00000008100	trnau1apa	99	78.827	ENSTRUG00000003352	trnau1apa	99	75.896	Takifugu_rubripes
ENSPFOG00000008100	trnau1apa	99	75.728	ENSTNIG00000006129	trnau1apa	99	75.081	Tetraodon_nigroviridis
ENSPFOG00000008100	trnau1apa	79	51.020	ENSTBEG00000008049	-	94	50.204	Tupaia_belangeri
ENSPFOG00000008100	trnau1apa	93	57.639	ENSTTRG00000001854	TRNAU1AP	95	56.944	Tursiops_truncatus
ENSPFOG00000008100	trnau1apa	90	57.401	ENSUAMG00000008789	TRNAU1AP	96	56.679	Ursus_americanus
ENSPFOG00000008100	trnau1apa	93	57.639	ENSUMAG00000011068	TRNAU1AP	95	56.944	Ursus_maritimus
ENSPFOG00000008100	trnau1apa	94	50.000	ENSVPAG00000006778	TRNAU1AP	96	49.333	Vicugna_pacos
ENSPFOG00000008100	trnau1apa	93	56.993	ENSVVUG00000012518	TRNAU1AP	88	56.294	Vulpes_vulpes
ENSPFOG00000008100	trnau1apa	100	99.026	ENSXMAG00000017361	trnau1apa	100	99.026	Xiphophorus_maculatus