EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPFOG00000008169 (Gene tree)
Gene ID: 103147478
Gene Symbol: clp1
Alias: -
Full Name: cleavage and polyadenylation factor I subunit 1
Gene Type: protein_coding
Species: Poecilia_formosa
Status: putative
Strand: Plus strand
Length: 3250 bases
Position: chrKI519793.1:896872-900121
Accession: 103147478
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPFOP00000008141	Clp1	PF06807.14	2.3e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPFOT00000008153	-	1782	XM_007565845	ENSPFOP00000008141	441 (aa)	XP_007565907	A0A087XQT8

Gene Model

Click here to download ENSPFOG00000008169's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000008169's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPFOG00000008169	clp1	99	74.943	ENSG00000172409	CLP1	99	75.406	Homo_sapiens
ENSPFOG00000008169	clp1	100	94.558	ENSAPOG00000008242	clp1	100	94.558	Acanthochromis_polyacanthus
ENSPFOG00000008169	clp1	99	74.713	ENSAMEG00000014551	CLP1	99	74.713	Ailuropoda_melanoleuca
ENSPFOG00000008169	clp1	100	94.104	ENSACIG00000006310	clp1	99	94.104	Amphilophus_citrinellus
ENSPFOG00000008169	clp1	100	94.785	ENSAOCG00000010681	clp1	100	94.785	Amphiprion_ocellaris
ENSPFOG00000008169	clp1	100	94.785	ENSAPEG00000012165	clp1	100	94.785	Amphiprion_percula
ENSPFOG00000008169	clp1	100	94.558	ENSATEG00000012374	clp1	100	94.558	Anabas_testudineus
ENSPFOG00000008169	clp1	98	75.463	ENSACAG00000007139	CLP1	99	75.463	Anolis_carolinensis
ENSPFOG00000008169	clp1	99	74.943	ENSANAG00000034935	CLP1	99	75.406	Aotus_nancymaae
ENSPFOG00000008169	clp1	100	94.331	ENSACLG00000013573	clp1	100	94.331	Astatotilapia_calliptera
ENSPFOG00000008169	clp1	95	87.707	ENSAMXG00000014194	clp1	97	87.707	Astyanax_mexicanus
ENSPFOG00000008169	clp1	98	74.942	ENSBTAG00000006493	CLP1	99	74.942	Bos_taurus
ENSPFOG00000008169	clp1	95	47.059	WBGene00010304	clpf-1	97	47.059	Caenorhabditis_elegans
ENSPFOG00000008169	clp1	99	74.943	ENSCJAG00000008748	CLP1	99	75.406	Callithrix_jacchus
ENSPFOG00000008169	clp1	98	74.942	ENSCAFG00000007815	CLP1	99	74.942	Canis_familiaris
ENSPFOG00000008169	clp1	98	74.942	ENSCAFG00020000903	CLP1	99	74.942	Canis_lupus_dingo
ENSPFOG00000008169	clp1	98	75.638	ENSCHIG00000023497	CLP1	99	75.638	Capra_hircus
ENSPFOG00000008169	clp1	99	74.943	ENSTSYG00000006824	CLP1	99	74.943	Carlito_syrichta
ENSPFOG00000008169	clp1	98	75.231	ENSCAPG00000009703	CLP1	99	75.231	Cavia_aperea
ENSPFOG00000008169	clp1	96	75.943	ENSCPOG00000012554	CLP1	99	75.943	Cavia_porcellus
ENSPFOG00000008169	clp1	98	74.942	ENSCCAG00000031957	CLP1	99	74.942	Cebus_capucinus
ENSPFOG00000008169	clp1	100	73.923	ENSCATG00000044628	CLP1	99	75.406	Cercocebus_atys
ENSPFOG00000008169	clp1	98	75.174	ENSCLAG00000004094	CLP1	99	75.174	Chinchilla_lanigera
ENSPFOG00000008169	clp1	98	75.406	ENSCSAG00000005994	CLP1	99	75.406	Chlorocebus_sabaeus
ENSPFOG00000008169	clp1	98	75.000	ENSCPBG00000016843	CLP1	99	75.000	Chrysemys_picta_bellii
ENSPFOG00000008169	clp1	96	61.229	ENSCING00000003779	-	97	61.229	Ciona_intestinalis
ENSPFOG00000008169	clp1	98	60.557	ENSCSAVG00000003437	-	99	60.557	Ciona_savignyi
ENSPFOG00000008169	clp1	99	74.943	ENSCANG00000034335	CLP1	99	75.406	Colobus_angolensis_palliatus
ENSPFOG00000008169	clp1	98	74.537	ENSCGRG00001002227	CLP1	99	74.537	Cricetulus_griseus_chok1gshd
ENSPFOG00000008169	clp1	98	74.537	ENSCGRG00000004328	CLP1	99	74.537	Cricetulus_griseus_crigri
ENSPFOG00000008169	clp1	100	90.930	ENSCSEG00000008614	clp1	100	90.930	Cynoglossus_semilaevis
ENSPFOG00000008169	clp1	100	97.052	ENSCVAG00000020101	clp1	100	97.052	Cyprinodon_variegatus
ENSPFOG00000008169	clp1	100	84.978	ENSDARG00000063663	clp1	100	84.978	Danio_rerio
ENSPFOG00000008169	clp1	98	74.596	ENSDNOG00000042415	CLP1	90	74.596	Dasypus_novemcinctus
ENSPFOG00000008169	clp1	98	74.710	ENSDORG00000014685	Clp1	99	74.710	Dipodomys_ordii
ENSPFOG00000008169	clp1	95	53.810	FBgn0033842	cbc	98	53.810	Drosophila_melanogaster
ENSPFOG00000008169	clp1	98	75.174	ENSETEG00000003009	CLP1	99	75.174	Echinops_telfairi
ENSPFOG00000008169	clp1	98	64.733	ENSEBUG00000011648	clp1	99	64.733	Eptatretus_burgeri
ENSPFOG00000008169	clp1	98	75.638	ENSEASG00005002093	CLP1	99	75.638	Equus_asinus_asinus
ENSPFOG00000008169	clp1	99	75.402	ENSECAG00000011597	CLP1	99	75.638	Equus_caballus
ENSPFOG00000008169	clp1	98	74.478	ENSEEUG00000012771	CLP1	99	74.478	Erinaceus_europaeus
ENSPFOG00000008169	clp1	100	86.099	ENSELUG00000024048	clp1	100	86.099	Esox_lucius
ENSPFOG00000008169	clp1	99	74.943	ENSFCAG00000006633	CLP1	99	75.174	Felis_catus
ENSPFOG00000008169	clp1	98	75.463	ENSFALG00000011145	CLP1	99	75.463	Ficedula_albicollis
ENSPFOG00000008169	clp1	98	75.174	ENSFDAG00000000234	CLP1	99	75.174	Fukomys_damarensis
ENSPFOG00000008169	clp1	100	97.959	ENSFHEG00000014760	CLP1	100	97.959	Fundulus_heteroclitus
ENSPFOG00000008169	clp1	100	87.982	ENSGMOG00000019340	clp1	100	87.982	Gadus_morhua
ENSPFOG00000008169	clp1	98	75.694	ENSGALG00000007370	CLP1	99	75.694	Gallus_gallus
ENSPFOG00000008169	clp1	100	99.093	ENSGAFG00000003020	clp1	100	99.093	Gambusia_affinis
ENSPFOG00000008169	clp1	100	93.651	ENSGACG00000017832	clp1	100	93.651	Gasterosteus_aculeatus
ENSPFOG00000008169	clp1	98	75.000	ENSGAGG00000013279	CLP1	99	75.000	Gopherus_agassizii
ENSPFOG00000008169	clp1	99	74.943	ENSGGOG00000023006	CLP1	99	75.406	Gorilla_gorilla
ENSPFOG00000008169	clp1	100	94.558	ENSHBUG00000010436	clp1	100	94.558	Haplochromis_burtoni
ENSPFOG00000008169	clp1	98	75.174	ENSHGLG00000009914	CLP1	99	75.174	Heterocephalus_glaber_female
ENSPFOG00000008169	clp1	98	75.174	ENSHGLG00100006105	CLP1	99	75.174	Heterocephalus_glaber_male
ENSPFOG00000008169	clp1	100	93.651	ENSHCOG00000010072	clp1	100	93.651	Hippocampus_comes
ENSPFOG00000008169	clp1	95	87.943	ENSIPUG00000016238	clp1	99	84.410	Ictalurus_punctatus
ENSPFOG00000008169	clp1	98	75.174	ENSSTOG00000029257	CLP1	99	75.174	Ictidomys_tridecemlineatus
ENSPFOG00000008169	clp1	98	74.710	ENSJJAG00000023691	Clp1	99	74.710	Jaculus_jaculus
ENSPFOG00000008169	clp1	100	95.918	ENSKMAG00000011990	clp1	100	95.918	Kryptolebias_marmoratus
ENSPFOG00000008169	clp1	100	94.558	ENSLBEG00000010201	clp1	100	94.558	Labrus_bergylta
ENSPFOG00000008169	clp1	98	74.884	ENSLACG00000003160	CLP1	99	74.884	Latimeria_chalumnae
ENSPFOG00000008169	clp1	71	86.335	ENSLOCG00000008074	clp1	100	86.335	Lepisosteus_oculatus
ENSPFOG00000008169	clp1	98	74.942	ENSLAFG00000014907	CLP1	99	74.942	Loxodonta_africana
ENSPFOG00000008169	clp1	99	74.943	ENSMFAG00000046074	CLP1	99	75.406	Macaca_fascicularis
ENSPFOG00000008169	clp1	99	74.943	ENSMMUG00000038007	CLP1	99	74.943	Macaca_mulatta
ENSPFOG00000008169	clp1	98	75.406	ENSMNEG00000000259	CLP1	99	75.406	Macaca_nemestrina
ENSPFOG00000008169	clp1	99	74.943	ENSMLEG00000043556	CLP1	99	75.406	Mandrillus_leucophaeus
ENSPFOG00000008169	clp1	100	95.918	ENSMAMG00000002149	clp1	100	95.918	Mastacembelus_armatus
ENSPFOG00000008169	clp1	100	94.331	ENSMZEG00005002850	clp1	100	94.331	Maylandia_zebra
ENSPFOG00000008169	clp1	98	75.694	ENSMGAG00000009643	CLP1	99	75.694	Meleagris_gallopavo
ENSPFOG00000008169	clp1	98	74.306	ENSMAUG00000016261	Clp1	99	74.306	Mesocricetus_auratus
ENSPFOG00000008169	clp1	99	74.713	ENSMICG00000004895	CLP1	99	74.942	Microcebus_murinus
ENSPFOG00000008169	clp1	98	74.769	ENSMOCG00000005498	Clp1	99	74.769	Microtus_ochrogaster
ENSPFOG00000008169	clp1	100	93.197	ENSMMOG00000003229	clp1	100	93.197	Mola_mola
ENSPFOG00000008169	clp1	98	75.000	ENSMODG00000020107	-	99	75.000	Monodelphis_domestica
ENSPFOG00000008169	clp1	98	75.000	ENSMODG00000024148	-	99	75.000	Monodelphis_domestica
ENSPFOG00000008169	clp1	100	95.465	ENSMALG00000014239	clp1	100	95.465	Monopterus_albus
ENSPFOG00000008169	clp1	98	74.537	MGP_CAROLIEiJ_G0023726	Clp1	99	74.537	Mus_caroli
ENSPFOG00000008169	clp1	98	74.537	ENSMUSG00000027079	Clp1	99	74.537	Mus_musculus
ENSPFOG00000008169	clp1	98	74.306	MGP_PahariEiJ_G0025177	Clp1	99	74.306	Mus_pahari
ENSPFOG00000008169	clp1	98	74.537	MGP_SPRETEiJ_G0024646	Clp1	99	74.537	Mus_spretus
ENSPFOG00000008169	clp1	98	74.942	ENSMPUG00000000268	CLP1	99	74.942	Mustela_putorius_furo
ENSPFOG00000008169	clp1	98	75.174	ENSMLUG00000007904	CLP1	99	75.174	Myotis_lucifugus
ENSPFOG00000008169	clp1	98	74.710	ENSNGAG00000006165	Clp1	99	74.710	Nannospalax_galili
ENSPFOG00000008169	clp1	100	94.558	ENSNBRG00000005225	clp1	100	94.558	Neolamprologus_brichardi
ENSPFOG00000008169	clp1	80	69.141	ENSNLEG00000012809	-	99	69.141	Nomascus_leucogenys
ENSPFOG00000008169	clp1	98	74.654	ENSMEUG00000010949	CLP1	100	74.654	Notamacropus_eugenii
ENSPFOG00000008169	clp1	69	76.898	ENSOPRG00000007329	CLP1	100	76.898	Ochotona_princeps
ENSPFOG00000008169	clp1	98	75.174	ENSODEG00000011410	CLP1	99	75.174	Octodon_degus
ENSPFOG00000008169	clp1	100	94.785	ENSONIG00000005089	clp1	100	94.785	Oreochromis_niloticus
ENSPFOG00000008169	clp1	98	74.942	ENSOCUG00000007045	CLP1	99	74.942	Oryctolagus_cuniculus
ENSPFOG00000008169	clp1	100	94.104	ENSORLG00000003647	clp1	100	94.104	Oryzias_latipes
ENSPFOG00000008169	clp1	100	93.878	ENSORLG00020016676	clp1	100	93.878	Oryzias_latipes_hni
ENSPFOG00000008169	clp1	100	94.104	ENSORLG00015019484	clp1	100	94.104	Oryzias_latipes_hsok
ENSPFOG00000008169	clp1	100	94.104	ENSOMEG00000021303	clp1	100	94.104	Oryzias_melastigma
ENSPFOG00000008169	clp1	98	75.174	ENSOGAG00000004508	CLP1	99	75.174	Otolemur_garnettii
ENSPFOG00000008169	clp1	98	74.194	ENSOARG00000010145	CLP1	99	74.194	Ovis_aries
ENSPFOG00000008169	clp1	99	74.943	ENSPPAG00000041519	CLP1	99	75.406	Pan_paniscus
ENSPFOG00000008169	clp1	98	75.174	ENSPPRG00000006135	CLP1	99	75.174	Panthera_pardus
ENSPFOG00000008169	clp1	98	75.174	ENSPTIG00000015866	CLP1	99	75.174	Panthera_tigris_altaica
ENSPFOG00000008169	clp1	98	75.406	ENSPTRG00000047318	CLP1	99	75.406	Pan_troglodytes
ENSPFOG00000008169	clp1	99	74.943	ENSPANG00000017078	CLP1	98	74.943	Papio_anubis
ENSPFOG00000008169	clp1	100	85.169	ENSPKIG00000007697	clp1	100	85.618	Paramormyrops_kingsleyae
ENSPFOG00000008169	clp1	93	72.372	ENSPSIG00000005468	CLP1	99	72.372	Pelodiscus_sinensis
ENSPFOG00000008169	clp1	100	92.290	ENSPMGG00000012171	clp1	100	92.290	Periophthalmus_magnuspinnatus
ENSPFOG00000008169	clp1	98	74.769	ENSPEMG00000011213	-	99	74.769	Peromyscus_maniculatus_bairdii
ENSPFOG00000008169	clp1	95	67.773	ENSPMAG00000006707	clp1	98	67.773	Petromyzon_marinus
ENSPFOG00000008169	clp1	98	75.463	ENSPCIG00000011899	CLP1	99	75.463	Phascolarctos_cinereus
ENSPFOG00000008169	clp1	100	100.000	ENSPLAG00000022388	clp1	100	100.000	Poecilia_latipinna
ENSPFOG00000008169	clp1	100	100.000	ENSPMEG00000021088	clp1	100	100.000	Poecilia_mexicana
ENSPFOG00000008169	clp1	100	99.093	ENSPREG00000017802	clp1	100	99.093	Poecilia_reticulata
ENSPFOG00000008169	clp1	52	73.799	ENSPPYG00000003266	-	100	73.799	Pongo_abelii
ENSPFOG00000008169	clp1	99	74.713	ENSPCOG00000000360	CLP1	99	74.713	Propithecus_coquereli
ENSPFOG00000008169	clp1	98	74.942	ENSPVAG00000016270	CLP1	99	74.942	Pteropus_vampyrus
ENSPFOG00000008169	clp1	100	94.558	ENSPNYG00000017274	clp1	99	94.558	Pundamilia_nyererei
ENSPFOG00000008169	clp1	100	85.045	ENSPNAG00000026460	clp1	100	85.268	Pygocentrus_nattereri
ENSPFOG00000008169	clp1	98	74.537	ENSRNOG00000007416	Clp1	99	74.537	Rattus_norvegicus
ENSPFOG00000008169	clp1	98	75.406	ENSRBIG00000018191	CLP1	99	75.406	Rhinopithecus_bieti
ENSPFOG00000008169	clp1	99	74.943	ENSRROG00000039265	CLP1	99	75.406	Rhinopithecus_roxellana
ENSPFOG00000008169	clp1	94	62.802	ENSSBOG00000010558	-	93	62.802	Saimiri_boliviensis_boliviensis
ENSPFOG00000008169	clp1	98	75.406	ENSSBOG00000032517	-	99	75.406	Saimiri_boliviensis_boliviensis
ENSPFOG00000008169	clp1	98	75.000	ENSSHAG00000015695	CLP1	99	75.000	Sarcophilus_harrisii
ENSPFOG00000008169	clp1	100	83.444	ENSSFOG00015000628	clp1	100	83.444	Scleropages_formosus
ENSPFOG00000008169	clp1	100	94.558	ENSSMAG00000019423	clp1	99	94.558	Scophthalmus_maximus
ENSPFOG00000008169	clp1	100	94.785	ENSSDUG00000014495	clp1	100	94.785	Seriola_dumerili
ENSPFOG00000008169	clp1	100	94.558	ENSSLDG00000000937	clp1	100	94.558	Seriola_lalandi_dorsalis
ENSPFOG00000008169	clp1	52	73.684	ENSSARG00000002459	CLP1	100	73.684	Sorex_araneus
ENSPFOG00000008169	clp1	98	74.769	ENSSPUG00000016811	CLP1	99	74.769	Sphenodon_punctatus
ENSPFOG00000008169	clp1	100	94.558	ENSSPAG00000016052	clp1	100	94.558	Stegastes_partitus
ENSPFOG00000008169	clp1	98	74.942	ENSSSCG00000031442	CLP1	99	74.942	Sus_scrofa
ENSPFOG00000008169	clp1	98	75.231	ENSTGUG00000007002	CLP1	99	75.231	Taeniopygia_guttata
ENSPFOG00000008169	clp1	100	90.476	ENSTRUG00000012602	clp1	100	90.476	Takifugu_rubripes
ENSPFOG00000008169	clp1	100	90.476	ENSTNIG00000013125	clp1	100	90.476	Tetraodon_nigroviridis
ENSPFOG00000008169	clp1	98	74.710	ENSTBEG00000009975	CLP1	99	74.710	Tupaia_belangeri
ENSPFOG00000008169	clp1	98	74.942	ENSTTRG00000002096	CLP1	99	74.942	Tursiops_truncatus
ENSPFOG00000008169	clp1	98	74.942	ENSUAMG00000011388	CLP1	99	74.942	Ursus_americanus
ENSPFOG00000008169	clp1	98	74.942	ENSUMAG00000018317	CLP1	99	74.942	Ursus_maritimus
ENSPFOG00000008169	clp1	100	73.923	ENSVVUG00000017138	CLP1	99	73.923	Vulpes_vulpes
ENSPFOG00000008169	clp1	98	72.055	ENSXETG00000007088	clp1	97	72.286	Xenopus_tropicalis
ENSPFOG00000008169	clp1	100	99.320	ENSXCOG00000002287	clp1	100	99.320	Xiphophorus_couchianus
ENSPFOG00000008169	clp1	100	99.320	ENSXMAG00000009783	clp1	100	99.320	Xiphophorus_maculatus