EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPFOG00000008440 (Gene tree)
Gene ID: 103137409
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Poecilia_formosa
Status: putative
Strand: Plus strand
Length: 13721 bases
Position: chrKI519650.1:1653105-1666825
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPFOP00000025047	RF-1	PF00472.20	9.2e-39	1	1
ENSPFOP00000008515	RF-1	PF00472.20	1.2e-38	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPFOT00000023674	-	1378	-	ENSPFOP00000025047	371 (aa)	-	A0A096M0V6
ENSPFOT00000008527	-	1275	-	ENSPFOP00000008515	425 (aa)	-	A0A087XRW2

Gene Model

Click here to download ENSPFOG00000008440's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000008440's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPFOG00000008440	-	87	46.970	ENSPFOG00000000254	mtrf1	85	43.583

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPFOG00000008440	-	89	62.349	ENSG00000112031	MTRF1L	99	62.264	Homo_sapiens
ENSPFOG00000008440	-	95	84.986	ENSAPOG00000005515	mtrf1l	96	80.941	Acanthochromis_polyacanthus
ENSPFOG00000008440	-	84	66.879	ENSAMEG00000001252	MTRF1L	82	66.879	Ailuropoda_melanoleuca
ENSPFOG00000008440	-	95	82.153	ENSACIG00000011084	mtrf1l	99	75.870	Amphilophus_citrinellus
ENSPFOG00000008440	-	95	85.836	ENSAOCG00000009709	mtrf1l	99	79.245	Amphiprion_ocellaris
ENSPFOG00000008440	-	95	85.552	ENSAPEG00000023778	mtrf1l	99	79.481	Amphiprion_percula
ENSPFOG00000008440	-	95	82.720	ENSATEG00000011872	mtrf1l	99	76.047	Anabas_testudineus
ENSPFOG00000008440	-	79	68.027	ENSAPLG00000007043	MTRF1L	99	68.027	Anas_platyrhynchos
ENSPFOG00000008440	-	82	66.013	ENSACAG00000005557	MTRF1L	86	62.018	Anolis_carolinensis
ENSPFOG00000008440	-	89	62.651	ENSANAG00000007078	MTRF1L	86	62.651	Aotus_nancymaae
ENSPFOG00000008440	-	95	81.586	ENSACLG00000025524	mtrf1l	99	75.926	Astatotilapia_calliptera
ENSPFOG00000008440	-	95	60.340	ENSAMXG00000003666	mtrf1l	85	58.186	Astyanax_mexicanus
ENSPFOG00000008440	-	95	69.405	ENSAMXG00000030045	mtrf1l	91	66.497	Astyanax_mexicanus
ENSPFOG00000008440	-	89	63.030	ENSBTAG00000009275	MTRF1L	85	63.030	Bos_taurus
ENSPFOG00000008440	-	90	62.575	ENSCJAG00000044179	MTRF1L	86	62.575	Callithrix_jacchus
ENSPFOG00000008440	-	63	73.077	ENSCAFG00000000549	MTRF1L	98	73.077	Canis_familiaris
ENSPFOG00000008440	-	82	68.317	ENSCAFG00020014937	MTRF1L	83	66.667	Canis_lupus_dingo
ENSPFOG00000008440	-	89	62.727	ENSCHIG00000007830	MTRF1L	90	62.727	Capra_hircus
ENSPFOG00000008440	-	83	65.909	ENSTSYG00000003079	MTRF1L	81	65.909	Carlito_syrichta
ENSPFOG00000008440	-	89	62.349	ENSCCAG00000035144	MTRF1L	86	62.349	Cebus_capucinus
ENSPFOG00000008440	-	89	62.349	ENSCATG00000035276	-	86	62.349	Cercocebus_atys
ENSPFOG00000008440	-	89	56.325	ENSCATG00000003094	-	89	56.325	Cercocebus_atys
ENSPFOG00000008440	-	89	49.699	ENSCATG00000036654	-	88	49.699	Cercocebus_atys
ENSPFOG00000008440	-	84	64.537	ENSCLAG00000003779	MTRF1L	84	64.537	Chinchilla_lanigera
ENSPFOG00000008440	-	89	61.747	ENSCSAG00000013511	MTRF1L	86	61.747	Chlorocebus_sabaeus
ENSPFOG00000008440	-	84	53.994	ENSCHOG00000006884	MTRF1L	82	53.994	Choloepus_hoffmanni
ENSPFOG00000008440	-	84	66.026	ENSCPBG00000016349	MTRF1L	78	66.026	Chrysemys_picta_bellii
ENSPFOG00000008440	-	89	59.036	ENSCANG00000017637	-	90	59.036	Colobus_angolensis_palliatus
ENSPFOG00000008440	-	84	52.000	ENSCANG00000029709	-	88	52.147	Colobus_angolensis_palliatus
ENSPFOG00000008440	-	89	61.747	ENSCANG00000038924	-	86	61.747	Colobus_angolensis_palliatus
ENSPFOG00000008440	-	83	68.182	ENSCGRG00001024662	Mtrf1l	84	67.412	Cricetulus_griseus_chok1gshd
ENSPFOG00000008440	-	83	68.182	ENSCGRG00000003761	Mtrf1l	84	67.412	Cricetulus_griseus_crigri
ENSPFOG00000008440	-	96	74.366	ENSCSEG00000002684	mtrf1l	98	69.626	Cynoglossus_semilaevis
ENSPFOG00000008440	-	100	83.645	ENSCVAG00000010936	mtrf1l	99	83.645	Cyprinodon_variegatus
ENSPFOG00000008440	-	92	71.221	ENSDARG00000060005	mtrf1l	91	66.247	Danio_rerio
ENSPFOG00000008440	-	81	66.887	ENSDNOG00000049717	-	81	66.885	Dasypus_novemcinctus
ENSPFOG00000008440	-	77	52.632	ENSDNOG00000044927	-	76	52.632	Dasypus_novemcinctus
ENSPFOG00000008440	-	84	65.495	ENSDORG00000010997	Mtrf1l	85	65.495	Dipodomys_ordii
ENSPFOG00000008440	-	57	58.685	ENSEBUG00000005616	mtrf1l	65	58.685	Eptatretus_burgeri
ENSPFOG00000008440	-	84	64.856	ENSEASG00005018866	MTRF1L	71	64.856	Equus_asinus_asinus
ENSPFOG00000008440	-	84	65.176	ENSECAG00000002759	MTRF1L	71	65.176	Equus_caballus
ENSPFOG00000008440	-	70	70.881	ENSEEUG00000002407	MTRF1L	98	70.881	Erinaceus_europaeus
ENSPFOG00000008440	-	94	72.779	ENSELUG00000004095	mtrf1l	95	64.953	Esox_lucius
ENSPFOG00000008440	-	82	66.667	ENSFCAG00000037854	MTRF1L	81	66.667	Felis_catus
ENSPFOG00000008440	-	81	68.667	ENSFALG00000012403	MTRF1L	98	69.728	Ficedula_albicollis
ENSPFOG00000008440	-	83	67.208	ENSFDAG00000007828	MTRF1L	83	67.208	Fukomys_damarensis
ENSPFOG00000008440	-	100	88.140	ENSFHEG00000007025	mtrf1l	99	88.140	Fundulus_heteroclitus
ENSPFOG00000008440	-	55	77.451	ENSGMOG00000007013	mtrf1l	99	77.451	Gadus_morhua
ENSPFOG00000008440	-	86	65.517	ENSGALG00000013609	MTRF1L	80	65.517	Gallus_gallus
ENSPFOG00000008440	-	100	95.529	ENSGAFG00000012295	mtrf1l	99	95.529	Gambusia_affinis
ENSPFOG00000008440	-	53	87.179	ENSGACG00000001302	mtrf1l	93	86.765	Gasterosteus_aculeatus
ENSPFOG00000008440	-	84	66.667	ENSGAGG00000011084	MTRF1L	92	68.707	Gopherus_agassizii
ENSPFOG00000008440	-	89	62.651	ENSGGOG00000022451	MTRF1L	86	62.651	Gorilla_gorilla
ENSPFOG00000008440	-	95	81.020	ENSHBUG00000006300	mtrf1l	99	75.463	Haplochromis_burtoni
ENSPFOG00000008440	-	82	66.340	ENSHGLG00000003207	MTRF1L	81	66.340	Heterocephalus_glaber_female
ENSPFOG00000008440	-	82	66.340	ENSHGLG00100016316	MTRF1L	77	66.340	Heterocephalus_glaber_male
ENSPFOG00000008440	-	96	78.652	ENSHCOG00000003212	mtrf1l	99	70.998	Hippocampus_comes
ENSPFOG00000008440	-	89	75.152	ENSIPUG00000018643	MTRF1L	89	67.939	Ictalurus_punctatus
ENSPFOG00000008440	-	82	67.647	ENSSTOG00000009980	MTRF1L	84	67.647	Ictidomys_tridecemlineatus
ENSPFOG00000008440	-	85	63.608	ENSJJAG00000024141	Mtrf1l	87	63.608	Jaculus_jaculus
ENSPFOG00000008440	-	95	82.436	ENSKMAG00000017018	mtrf1l	98	78.169	Kryptolebias_marmoratus
ENSPFOG00000008440	-	93	80.000	ENSLBEG00000020890	mtrf1l	99	72.558	Labrus_bergylta
ENSPFOG00000008440	-	93	75.652	ENSLBEG00000005234	-	97	73.973	Labrus_bergylta
ENSPFOG00000008440	-	57	69.767	ENSLACG00000007118	MTRF1L	99	69.767	Latimeria_chalumnae
ENSPFOG00000008440	-	89	56.495	ENSLOCG00000015502	mtrf1l	99	54.233	Lepisosteus_oculatus
ENSPFOG00000008440	-	85	64.873	ENSLAFG00000004022	MTRF1L	82	64.873	Loxodonta_africana
ENSPFOG00000008440	-	89	56.325	ENSMFAG00000003131	-	85	56.325	Macaca_fascicularis
ENSPFOG00000008440	-	89	61.747	ENSMFAG00000039727	-	86	61.747	Macaca_fascicularis
ENSPFOG00000008440	-	89	60.241	ENSMMUG00000020178	-	86	60.241	Macaca_mulatta
ENSPFOG00000008440	-	89	56.024	ENSMMUG00000014259	-	85	56.024	Macaca_mulatta
ENSPFOG00000008440	-	89	56.325	ENSMNEG00000034802	-	85	56.325	Macaca_nemestrina
ENSPFOG00000008440	-	89	61.747	ENSMNEG00000030044	-	86	61.747	Macaca_nemestrina
ENSPFOG00000008440	-	84	64.537	ENSMLEG00000034354	-	95	64.537	Mandrillus_leucophaeus
ENSPFOG00000008440	-	89	56.024	ENSMLEG00000029899	-	85	56.024	Mandrillus_leucophaeus
ENSPFOG00000008440	-	95	80.453	ENSMAMG00000022015	mtrf1l	99	74.413	Mastacembelus_armatus
ENSPFOG00000008440	-	95	81.586	ENSMZEG00005019895	mtrf1l	99	75.926	Maylandia_zebra
ENSPFOG00000008440	-	50	74.457	ENSMGAG00000012745	MTRF1L	97	74.457	Meleagris_gallopavo
ENSPFOG00000008440	-	83	66.883	ENSMAUG00000017702	Mtrf1l	84	66.134	Mesocricetus_auratus
ENSPFOG00000008440	-	89	62.651	ENSMICG00000003811	MTRF1L	86	62.651	Microcebus_murinus
ENSPFOG00000008440	-	84	66.454	ENSMOCG00000016147	Mtrf1l	84	66.454	Microtus_ochrogaster
ENSPFOG00000008440	-	96	73.109	ENSMMOG00000007451	mtrf1l	99	68.056	Mola_mola
ENSPFOG00000008440	-	84	67.419	ENSMODG00000008487	MTRF1L	81	67.419	Monodelphis_domestica
ENSPFOG00000008440	-	93	82.029	ENSMALG00000020099	mtrf1l	95	74.769	Monopterus_albus
ENSPFOG00000008440	-	83	67.208	MGP_CAROLIEiJ_G0015092	Mtrf1l	84	66.454	Mus_caroli
ENSPFOG00000008440	-	84	66.454	ENSMUSG00000019774	Mtrf1l	84	66.454	Mus_musculus
ENSPFOG00000008440	-	83	66.883	MGP_PahariEiJ_G0023711	Mtrf1l	84	66.134	Mus_pahari
ENSPFOG00000008440	-	84	66.454	MGP_SPRETEiJ_G0015898	Mtrf1l	84	66.454	Mus_spretus
ENSPFOG00000008440	-	84	66.773	ENSMPUG00000010577	MTRF1L	82	66.773	Mustela_putorius_furo
ENSPFOG00000008440	-	79	68.493	ENSMLUG00000014105	MTRF1L	99	68.493	Myotis_lucifugus
ENSPFOG00000008440	-	82	67.320	ENSNGAG00000021373	Mtrf1l	83	67.320	Nannospalax_galili
ENSPFOG00000008440	-	95	81.586	ENSNBRG00000011974	mtrf1l	99	75.515	Neolamprologus_brichardi
ENSPFOG00000008440	-	89	62.651	ENSNLEG00000015450	MTRF1L	86	62.651	Nomascus_leucogenys
ENSPFOG00000008440	-	71	53.208	ENSMEUG00000007378	MTRF1L	70	53.208	Notamacropus_eugenii
ENSPFOG00000008440	-	71	60.456	ENSOPRG00000011636	MTRF1L	98	60.456	Ochotona_princeps
ENSPFOG00000008440	-	84	65.273	ENSODEG00000000973	MTRF1L	98	65.273	Octodon_degus
ENSPFOG00000008440	-	95	81.127	ENSONIG00000001104	mtrf1l	98	81.649	Oreochromis_niloticus
ENSPFOG00000008440	-	79	69.863	ENSOANG00000003594	MTRF1L	95	69.863	Ornithorhynchus_anatinus
ENSPFOG00000008440	-	84	66.134	ENSOCUG00000000063	-	82	66.134	Oryctolagus_cuniculus
ENSPFOG00000008440	-	82	64.379	ENSOCUG00000021489	-	81	64.379	Oryctolagus_cuniculus
ENSPFOG00000008440	-	99	75.656	ENSORLG00000003924	mtrf1l	98	75.765	Oryzias_latipes
ENSPFOG00000008440	-	95	82.436	ENSORLG00020014099	mtrf1l	99	76.179	Oryzias_latipes_hni
ENSPFOG00000008440	-	99	75.418	ENSORLG00015019582	mtrf1l	99	75.529	Oryzias_latipes_hsok
ENSPFOG00000008440	-	91	83.136	ENSOMEG00000013067	mtrf1l	98	77.176	Oryzias_melastigma
ENSPFOG00000008440	-	85	64.127	ENSOGAG00000006521	MTRF1L	83	64.127	Otolemur_garnettii
ENSPFOG00000008440	-	89	62.121	ENSOARG00000003999	MTRF1L	85	62.121	Ovis_aries
ENSPFOG00000008440	-	89	62.952	ENSPPAG00000031251	MTRF1L	86	62.952	Pan_paniscus
ENSPFOG00000008440	-	82	67.320	ENSPPRG00000011039	MTRF1L	81	67.320	Panthera_pardus
ENSPFOG00000008440	-	82	67.320	ENSPTIG00000020019	MTRF1L	81	67.320	Panthera_tigris_altaica
ENSPFOG00000008440	-	89	62.952	ENSPTRG00000018722	MTRF1L	86	62.952	Pan_troglodytes
ENSPFOG00000008440	-	89	62.349	ENSPANG00000033150	-	86	62.349	Papio_anubis
ENSPFOG00000008440	-	89	56.024	ENSPANG00000019401	-	89	56.024	Papio_anubis
ENSPFOG00000008440	-	91	70.920	ENSPKIG00000020934	mtrf1l	91	66.838	Paramormyrops_kingsleyae
ENSPFOG00000008440	-	82	66.993	ENSPSIG00000005339	MTRF1L	99	66.993	Pelodiscus_sinensis
ENSPFOG00000008440	-	91	75.439	ENSPMGG00000003044	mtrf1l	89	71.026	Periophthalmus_magnuspinnatus
ENSPFOG00000008440	-	83	67.208	ENSPEMG00000018112	Mtrf1l	84	66.454	Peromyscus_maniculatus_bairdii
ENSPFOG00000008440	-	85	57.143	ENSPMAG00000008755	mtrf1l	98	57.143	Petromyzon_marinus
ENSPFOG00000008440	-	86	66.667	ENSPCIG00000008136	MTRF1L	84	66.667	Phascolarctos_cinereus
ENSPFOG00000008440	-	57	92.925	ENSPLAG00000002116	-	99	92.925	Poecilia_latipinna
ENSPFOG00000008440	-	100	100.000	ENSPLAG00000014010	mtrf1l	99	100.000	Poecilia_latipinna
ENSPFOG00000008440	-	57	92.925	ENSPMEG00000019429	-	99	92.925	Poecilia_mexicana
ENSPFOG00000008440	-	100	99.059	ENSPMEG00000022846	mtrf1l	94	99.059	Poecilia_mexicana
ENSPFOG00000008440	-	100	97.412	ENSPREG00000002347	mtrf1l	99	97.412	Poecilia_reticulata
ENSPFOG00000008440	-	89	62.349	ENSPPYG00000017117	MTRF1L	86	62.349	Pongo_abelii
ENSPFOG00000008440	-	57	67.290	ENSPCAG00000006186	MTRF1L	58	67.290	Procavia_capensis
ENSPFOG00000008440	-	87	64.087	ENSPCOG00000008406	MTRF1L	85	64.087	Propithecus_coquereli
ENSPFOG00000008440	-	84	65.815	ENSPVAG00000004222	MTRF1L	83	65.815	Pteropus_vampyrus
ENSPFOG00000008440	-	89	76.133	ENSPNAG00000008890	mtrf1l	91	71.208	Pygocentrus_nattereri
ENSPFOG00000008440	-	83	66.234	ENSRNOG00000018773	Mtrf1l	84	65.495	Rattus_norvegicus
ENSPFOG00000008440	-	60	61.161	ENSRBIG00000016086	-	76	61.161	Rhinopithecus_bieti
ENSPFOG00000008440	-	60	60.538	ENSRBIG00000006321	-	80	60.538	Rhinopithecus_bieti
ENSPFOG00000008440	-	89	61.446	ENSRROG00000034179	-	89	61.446	Rhinopithecus_roxellana
ENSPFOG00000008440	-	89	62.048	ENSRROG00000027753	-	86	62.048	Rhinopithecus_roxellana
ENSPFOG00000008440	-	89	62.349	ENSSBOG00000024984	MTRF1L	86	62.349	Saimiri_boliviensis_boliviensis
ENSPFOG00000008440	-	86	66.352	ENSSHAG00000017997	MTRF1L	82	66.352	Sarcophilus_harrisii
ENSPFOG00000008440	-	86	71.069	ENSSFOG00015004475	mtrf1l	99	62.269	Scleropages_formosus
ENSPFOG00000008440	-	95	78.212	ENSSMAG00000019886	mtrf1l	98	72.184	Scophthalmus_maximus
ENSPFOG00000008440	-	96	79.272	ENSSDUG00000019392	mtrf1l	99	73.318	Seriola_dumerili
ENSPFOG00000008440	-	96	78.431	ENSSLDG00000024033	mtrf1l	99	72.158	Seriola_lalandi_dorsalis
ENSPFOG00000008440	-	78	69.896	ENSSARG00000011089	MTRF1L	99	69.896	Sorex_araneus
ENSPFOG00000008440	-	86	63.836	ENSSPUG00000014563	MTRF1L	83	69.288	Sphenodon_punctatus
ENSPFOG00000008440	-	95	81.020	ENSSPAG00000019725	mtrf1l	99	75.524	Stegastes_partitus
ENSPFOG00000008440	-	85	64.762	ENSSSCG00000004076	MTRF1L	83	64.762	Sus_scrofa
ENSPFOG00000008440	-	85	67.302	ENSTGUG00000011186	MTRF1L	98	67.302	Taeniopygia_guttata
ENSPFOG00000008440	-	95	80.508	ENSTRUG00000001172	mtrf1l	99	74.769	Takifugu_rubripes
ENSPFOG00000008440	-	85	82.222	ENSTNIG00000007451	mtrf1l	99	82.222	Tetraodon_nigroviridis
ENSPFOG00000008440	-	82	66.013	ENSTBEG00000003131	MTRF1L	81	66.013	Tupaia_belangeri
ENSPFOG00000008440	-	89	63.939	ENSTTRG00000000402	MTRF1L	86	63.939	Tursiops_truncatus
ENSPFOG00000008440	-	84	66.773	ENSUAMG00000008221	MTRF1L	82	66.773	Ursus_americanus
ENSPFOG00000008440	-	84	66.773	ENSUMAG00000013507	MTRF1L	82	66.773	Ursus_maritimus
ENSPFOG00000008440	-	89	63.636	ENSVPAG00000001191	MTRF1L	85	63.636	Vicugna_pacos
ENSPFOG00000008440	-	72	71.536	ENSXETG00000018541	mtrf1l	100	71.536	Xenopus_tropicalis
ENSPFOG00000008440	-	100	96.000	ENSXCOG00000013401	mtrf1l	99	96.000	Xiphophorus_couchianus
ENSPFOG00000008440	-	100	95.529	ENSXMAG00000017158	mtrf1l	99	95.529	Xiphophorus_maculatus