EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPFOG00000008675 (Gene tree)
Gene ID: 103156900
Gene Symbol: trmt13
Alias: -
Full Name: tRNA methyltransferase 13 homolog
Gene Type: protein_coding
Species: Poecilia_formosa
Status: putative
Strand: Minus strand
Length: 5047 bases
Position: chrKI520118.1:229685-234731
Accession: ZDB-GENE-050327-19
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPFOP00000008724	TRM13	PF05206.14	3.4e-79	1	1
ENSPFOP00000008724	zf-U11-48K	PF05253.12	9.1e-10	1	1
ENSPFOP00000008724	zf-TRM13_CCCH	PF11722.8	8.9e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPFOT00000008736	-	1353	-	ENSPFOP00000008724	451 (aa)	-	A0A087XSH1

Gene Model

Click here to download ENSPFOG00000008675's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000008675's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPFOG00000008675	trmt13	99	49.375	ENSG00000122435	TRMT13	98	51.402	Homo_sapiens
ENSPFOG00000008675	trmt13	95	63.450	ENSAPOG00000015131	trmt13	99	63.860	Acanthochromis_polyacanthus
ENSPFOG00000008675	trmt13	98	48.945	ENSAMEG00000008917	TRMT13	99	48.945	Ailuropoda_melanoleuca
ENSPFOG00000008675	trmt13	98	62.316	ENSACIG00000005804	trmt13	98	63.771	Amphilophus_citrinellus
ENSPFOG00000008675	trmt13	95	63.580	ENSAOCG00000023585	trmt13	99	63.580	Amphiprion_ocellaris
ENSPFOG00000008675	trmt13	95	63.786	ENSAPEG00000004025	trmt13	99	63.786	Amphiprion_percula
ENSPFOG00000008675	trmt13	96	65.502	ENSATEG00000006597	trmt13	97	65.502	Anabas_testudineus
ENSPFOG00000008675	trmt13	86	50.000	ENSAPLG00000014924	TRMT13	98	50.000	Anas_platyrhynchos
ENSPFOG00000008675	trmt13	96	52.495	ENSACAG00000003498	TRMT13	98	52.495	Anolis_carolinensis
ENSPFOG00000008675	trmt13	99	48.852	ENSANAG00000019525	TRMT13	99	48.852	Aotus_nancymaae
ENSPFOG00000008675	trmt13	94	67.720	ENSACLG00000020018	trmt13	97	67.720	Astatotilapia_calliptera
ENSPFOG00000008675	trmt13	95	52.954	ENSAMXG00000017963	trmt13	97	54.084	Astyanax_mexicanus
ENSPFOG00000008675	trmt13	98	48.842	ENSBTAG00000015781	TRMT13	99	48.842	Bos_taurus
ENSPFOG00000008675	trmt13	99	48.529	ENSCJAG00000000200	TRMT13	89	63.359	Callithrix_jacchus
ENSPFOG00000008675	trmt13	63	47.284	ENSCAFG00000020021	TRMT13	98	47.284	Canis_familiaris
ENSPFOG00000008675	trmt13	58	54.717	ENSCAFG00020011572	TRMT13	92	54.717	Canis_lupus_dingo
ENSPFOG00000008675	trmt13	99	48.434	ENSCHIG00000015395	TRMT13	99	48.434	Capra_hircus
ENSPFOG00000008675	trmt13	96	49.785	ENSTSYG00000010811	TRMT13	98	49.785	Carlito_syrichta
ENSPFOG00000008675	trmt13	50	76.471	ENSCAPG00000009085	TRMT13	94	41.449	Cavia_aperea
ENSPFOG00000008675	trmt13	96	50.000	ENSCPOG00000000694	TRMT13	97	50.000	Cavia_porcellus
ENSPFOG00000008675	trmt13	99	49.061	ENSCCAG00000023772	TRMT13	99	49.061	Cebus_capucinus
ENSPFOG00000008675	trmt13	99	49.686	ENSCATG00000033556	TRMT13	99	49.686	Cercocebus_atys
ENSPFOG00000008675	trmt13	88	49.165	ENSCLAG00000008220	TRMT13	100	49.767	Chinchilla_lanigera
ENSPFOG00000008675	trmt13	99	49.375	ENSCSAG00000001506	TRMT13	99	49.375	Chlorocebus_sabaeus
ENSPFOG00000008675	trmt13	97	51.502	ENSCPBG00000026671	TRMT13	97	51.502	Chrysemys_picta_bellii
ENSPFOG00000008675	trmt13	99	49.375	ENSCANG00000034659	TRMT13	99	49.375	Colobus_angolensis_palliatus
ENSPFOG00000008675	trmt13	96	48.817	ENSCGRG00001021601	Trmt13	96	48.817	Cricetulus_griseus_chok1gshd
ENSPFOG00000008675	trmt13	51	44.314	ENSCGRG00000000093	-	98	44.314	Cricetulus_griseus_crigri
ENSPFOG00000008675	trmt13	97	64.920	ENSCSEG00000000591	trmt13	99	64.920	Cynoglossus_semilaevis
ENSPFOG00000008675	trmt13	94	70.961	ENSCVAG00000017342	trmt13	92	70.961	Cyprinodon_variegatus
ENSPFOG00000008675	trmt13	95	54.000	ENSDARG00000102846	trmt13	96	54.000	Danio_rerio
ENSPFOG00000008675	trmt13	57	55.133	ENSDNOG00000001710	TRMT13	80	55.133	Dasypus_novemcinctus
ENSPFOG00000008675	trmt13	97	49.041	ENSDORG00000015808	Trmt13	97	49.041	Dipodomys_ordii
ENSPFOG00000008675	trmt13	96	36.123	FBgn0037435	CG18048	95	36.123	Drosophila_melanogaster
ENSPFOG00000008675	trmt13	95	43.803	ENSETEG00000005819	TRMT13	96	43.803	Echinops_telfairi
ENSPFOG00000008675	trmt13	94	44.714	ENSEBUG00000014444	trmt13	96	44.934	Eptatretus_burgeri
ENSPFOG00000008675	trmt13	99	48.643	ENSEASG00005015918	TRMT13	99	48.643	Equus_asinus_asinus
ENSPFOG00000008675	trmt13	99	48.643	ENSECAG00000022626	TRMT13	99	48.643	Equus_caballus
ENSPFOG00000008675	trmt13	78	57.377	ENSEEUG00000000294	TRMT13	76	57.377	Erinaceus_europaeus
ENSPFOG00000008675	trmt13	95	55.098	ENSELUG00000003803	trmt13	97	55.240	Esox_lucius
ENSPFOG00000008675	trmt13	99	48.117	ENSFCAG00000030618	TRMT13	99	48.117	Felis_catus
ENSPFOG00000008675	trmt13	96	52.723	ENSFALG00000002424	TRMT13	96	52.723	Ficedula_albicollis
ENSPFOG00000008675	trmt13	96	49.028	ENSFDAG00000006342	TRMT13	96	49.028	Fukomys_damarensis
ENSPFOG00000008675	trmt13	79	73.522	ENSFHEG00000022954	trmt13	99	73.267	Fundulus_heteroclitus
ENSPFOG00000008675	trmt13	94	53.547	ENSGMOG00000013223	trmt13	99	54.273	Gadus_morhua
ENSPFOG00000008675	trmt13	95	52.318	ENSGALG00000005290	TRMT13	98	51.613	Gallus_gallus
ENSPFOG00000008675	trmt13	80	89.757	ENSGAFG00000001577	trmt13	85	89.757	Gambusia_affinis
ENSPFOG00000008675	trmt13	95	66.592	ENSGACG00000013428	trmt13	97	66.815	Gasterosteus_aculeatus
ENSPFOG00000008675	trmt13	97	51.178	ENSGAGG00000023303	TRMT13	95	59.160	Gopherus_agassizii
ENSPFOG00000008675	trmt13	99	49.167	ENSGGOG00000005616	TRMT13	98	51.402	Gorilla_gorilla
ENSPFOG00000008675	trmt13	94	67.489	ENSHBUG00000007754	trmt13	97	67.489	Haplochromis_burtoni
ENSPFOG00000008675	trmt13	96	49.460	ENSHGLG00000002164	TRMT13	96	49.460	Heterocephalus_glaber_female
ENSPFOG00000008675	trmt13	96	49.460	ENSHGLG00100001618	TRMT13	96	49.460	Heterocephalus_glaber_male
ENSPFOG00000008675	trmt13	94	58.508	ENSHCOG00000020553	trmt13	96	57.437	Hippocampus_comes
ENSPFOG00000008675	trmt13	95	55.281	ENSIPUG00000024787	trmt13	97	56.404	Ictalurus_punctatus
ENSPFOG00000008675	trmt13	99	48.852	ENSSTOG00000013483	TRMT13	99	48.852	Ictidomys_tridecemlineatus
ENSPFOG00000008675	trmt13	98	49.362	ENSJJAG00000018012	Trmt13	99	49.362	Jaculus_jaculus
ENSPFOG00000008675	trmt13	63	67.347	ENSKMAG00000007639	trmt13	93	67.347	Kryptolebias_marmoratus
ENSPFOG00000008675	trmt13	96	63.578	ENSLBEG00000020238	trmt13	99	64.009	Labrus_bergylta
ENSPFOG00000008675	trmt13	95	51.209	ENSLACG00000013153	TRMT13	99	50.382	Latimeria_chalumnae
ENSPFOG00000008675	trmt13	95	53.333	ENSLOCG00000000418	trmt13	97	53.675	Lepisosteus_oculatus
ENSPFOG00000008675	trmt13	75	49.725	ENSLAFG00000002383	TRMT13	98	49.725	Loxodonta_africana
ENSPFOG00000008675	trmt13	99	49.375	ENSMFAG00000034681	TRMT13	99	49.375	Macaca_fascicularis
ENSPFOG00000008675	trmt13	99	49.375	ENSMMUG00000004243	TRMT13	99	49.375	Macaca_mulatta
ENSPFOG00000008675	trmt13	99	49.375	ENSMNEG00000036102	TRMT13	99	49.375	Macaca_nemestrina
ENSPFOG00000008675	trmt13	99	49.686	ENSMLEG00000034258	TRMT13	99	49.686	Mandrillus_leucophaeus
ENSPFOG00000008675	trmt13	96	65.495	ENSMAMG00000016597	trmt13	96	65.495	Mastacembelus_armatus
ENSPFOG00000008675	trmt13	94	67.494	ENSMZEG00005020959	trmt13	97	67.494	Maylandia_zebra
ENSPFOG00000008675	trmt13	86	52.163	ENSMGAG00000006970	TRMT13	98	52.163	Meleagris_gallopavo
ENSPFOG00000008675	trmt13	97	48.827	ENSMAUG00000010448	Trmt13	97	48.827	Mesocricetus_auratus
ENSPFOG00000008675	trmt13	97	49.680	ENSMICG00000005283	TRMT13	97	49.680	Microcebus_murinus
ENSPFOG00000008675	trmt13	98	48.837	ENSMOCG00000019914	Trmt13	98	48.837	Microtus_ochrogaster
ENSPFOG00000008675	trmt13	57	60.687	ENSMMOG00000007762	trmt13	89	60.687	Mola_mola
ENSPFOG00000008675	trmt13	98	47.925	ENSMODG00000003646	TRMT13	99	47.925	Monodelphis_domestica
ENSPFOG00000008675	trmt13	96	66.364	ENSMALG00000020965	trmt13	97	66.364	Monopterus_albus
ENSPFOG00000008675	trmt13	96	49.784	MGP_CAROLIEiJ_G0025568	Trmt13	96	52.326	Mus_caroli
ENSPFOG00000008675	trmt13	96	49.569	ENSMUSG00000033439	Trmt13	96	52.326	Mus_musculus
ENSPFOG00000008675	trmt13	96	49.569	MGP_PahariEiJ_G0027014	Trmt13	93	53.012	Mus_pahari
ENSPFOG00000008675	trmt13	96	49.785	MGP_SPRETEiJ_G0026518	Trmt13	96	52.326	Mus_spretus
ENSPFOG00000008675	trmt13	77	48.649	ENSMPUG00000002078	-	99	48.649	Mustela_putorius_furo
ENSPFOG00000008675	trmt13	97	50.000	ENSMLUG00000002124	TRMT13	98	50.000	Myotis_lucifugus
ENSPFOG00000008675	trmt13	94	63.288	ENSNBRG00000006783	trmt13	95	63.288	Neolamprologus_brichardi
ENSPFOG00000008675	trmt13	99	49.167	ENSNLEG00000035917	TRMT13	99	49.167	Nomascus_leucogenys
ENSPFOG00000008675	trmt13	52	48.750	ENSMEUG00000013346	-	97	48.750	Notamacropus_eugenii
ENSPFOG00000008675	trmt13	69	62.500	ENSOPRG00000012048	TRMT13	57	53.309	Ochotona_princeps
ENSPFOG00000008675	trmt13	94	68.090	ENSONIG00000004574	trmt13	97	68.090	Oreochromis_niloticus
ENSPFOG00000008675	trmt13	88	51.174	ENSOANG00000012057	TRMT13	98	51.174	Ornithorhynchus_anatinus
ENSPFOG00000008675	trmt13	97	48.718	ENSOCUG00000023095	TRMT13	97	48.718	Oryctolagus_cuniculus
ENSPFOG00000008675	trmt13	96	59.430	ENSORLG00000003320	trmt13	98	59.565	Oryzias_latipes
ENSPFOG00000008675	trmt13	95	60.265	ENSORLG00020005972	trmt13	97	61.211	Oryzias_latipes_hni
ENSPFOG00000008675	trmt13	96	66.079	ENSORLG00015002270	trmt13	98	66.079	Oryzias_latipes_hsok
ENSPFOG00000008675	trmt13	96	67.108	ENSOMEG00000006724	trmt13	94	67.108	Oryzias_melastigma
ENSPFOG00000008675	trmt13	97	48.614	ENSOGAG00000005618	TRMT13	96	48.529	Otolemur_garnettii
ENSPFOG00000008675	trmt13	99	48.434	ENSOARG00000017983	TRMT13	99	48.434	Ovis_aries
ENSPFOG00000008675	trmt13	99	49.375	ENSPPAG00000043736	TRMT13	98	51.402	Pan_paniscus
ENSPFOG00000008675	trmt13	99	48.434	ENSPPRG00000003424	TRMT13	99	48.434	Panthera_pardus
ENSPFOG00000008675	trmt13	99	48.434	ENSPTIG00000018598	TRMT13	99	48.434	Panthera_tigris_altaica
ENSPFOG00000008675	trmt13	99	49.375	ENSPTRG00000001001	TRMT13	98	51.402	Pan_troglodytes
ENSPFOG00000008675	trmt13	99	49.375	ENSPANG00000007598	TRMT13	99	49.375	Papio_anubis
ENSPFOG00000008675	trmt13	95	56.036	ENSPKIG00000001514	trmt13	97	56.036	Paramormyrops_kingsleyae
ENSPFOG00000008675	trmt13	86	50.721	ENSPSIG00000012703	TRMT13	99	50.721	Pelodiscus_sinensis
ENSPFOG00000008675	trmt13	95	57.494	ENSPMGG00000013298	trmt13	93	57.494	Periophthalmus_magnuspinnatus
ENSPFOG00000008675	trmt13	98	49.894	ENSPEMG00000000275	Trmt13	98	49.894	Peromyscus_maniculatus_bairdii
ENSPFOG00000008675	trmt13	93	49.127	ENSPMAG00000000823	trmt13	96	49.127	Petromyzon_marinus
ENSPFOG00000008675	trmt13	98	49.578	ENSPCIG00000007699	TRMT13	99	49.789	Phascolarctos_cinereus
ENSPFOG00000008675	trmt13	95	96.154	ENSPLAG00000009709	trmt13	99	96.154	Poecilia_latipinna
ENSPFOG00000008675	trmt13	95	95.023	ENSPMEG00000022954	trmt13	99	95.023	Poecilia_mexicana
ENSPFOG00000008675	trmt13	80	91.421	ENSPREG00000005645	trmt13	94	82.206	Poecilia_reticulata
ENSPFOG00000008675	trmt13	99	48.958	ENSPPYG00000001120	TRMT13	99	48.958	Pongo_abelii
ENSPFOG00000008675	trmt13	98	48.837	ENSPCAG00000002340	TRMT13	99	48.837	Procavia_capensis
ENSPFOG00000008675	trmt13	99	49.478	ENSPCOG00000017984	TRMT13	99	49.478	Propithecus_coquereli
ENSPFOG00000008675	trmt13	99	48.109	ENSPVAG00000017430	TRMT13	99	48.109	Pteropus_vampyrus
ENSPFOG00000008675	trmt13	94	65.541	ENSPNYG00000013690	trmt13	97	65.541	Pundamilia_nyererei
ENSPFOG00000008675	trmt13	95	54.084	ENSPNAG00000022130	trmt13	97	54.084	Pygocentrus_nattereri
ENSPFOG00000008675	trmt13	96	50.429	ENSRNOG00000015140	Trmt13	94	50.429	Rattus_norvegicus
ENSPFOG00000008675	trmt13	99	49.375	ENSRBIG00000037686	TRMT13	99	49.375	Rhinopithecus_bieti
ENSPFOG00000008675	trmt13	99	49.375	ENSRROG00000044057	TRMT13	99	49.375	Rhinopithecus_roxellana
ENSPFOG00000008675	trmt13	99	49.061	ENSSBOG00000026541	TRMT13	99	49.061	Saimiri_boliviensis_boliviensis
ENSPFOG00000008675	trmt13	90	48.741	ENSSHAG00000005213	TRMT13	97	48.741	Sarcophilus_harrisii
ENSPFOG00000008675	trmt13	96	56.512	ENSSFOG00015017560	trmt13	97	56.512	Scleropages_formosus
ENSPFOG00000008675	trmt13	95	65.721	ENSSMAG00000014592	trmt13	95	65.721	Scophthalmus_maximus
ENSPFOG00000008675	trmt13	95	65.801	ENSSDUG00000015508	trmt13	96	65.665	Seriola_dumerili
ENSPFOG00000008675	trmt13	95	65.801	ENSSLDG00000019060	trmt13	95	65.801	Seriola_lalandi_dorsalis
ENSPFOG00000008675	trmt13	96	43.601	ENSSARG00000010344	TRMT13	97	43.601	Sorex_araneus
ENSPFOG00000008675	trmt13	95	50.549	ENSSPUG00000016339	TRMT13	99	50.549	Sphenodon_punctatus
ENSPFOG00000008675	trmt13	94	67.706	ENSSPAG00000011922	trmt13	98	67.550	Stegastes_partitus
ENSPFOG00000008675	trmt13	99	49.269	ENSSSCG00000006869	TRMT13	99	49.269	Sus_scrofa
ENSPFOG00000008675	trmt13	96	52.402	ENSTGUG00000005253	TRMT13	99	52.402	Taeniopygia_guttata
ENSPFOG00000008675	trmt13	93	63.554	ENSTRUG00000008400	trmt13	98	62.667	Takifugu_rubripes
ENSPFOG00000008675	trmt13	67	48.734	ENSTBEG00000008911	TRMT13	77	48.734	Tupaia_belangeri
ENSPFOG00000008675	trmt13	98	47.346	ENSUAMG00000017251	TRMT13	98	47.346	Ursus_americanus
ENSPFOG00000008675	trmt13	98	48.945	ENSUMAG00000007901	TRMT13	100	48.966	Ursus_maritimus
ENSPFOG00000008675	trmt13	88	39.953	ENSVPAG00000001034	TRMT13	99	39.953	Vicugna_pacos
ENSPFOG00000008675	trmt13	98	48.729	ENSVVUG00000021996	TRMT13	98	48.729	Vulpes_vulpes
ENSPFOG00000008675	trmt13	96	52.412	ENSXETG00000013204	trmt13	98	52.412	Xenopus_tropicalis
ENSPFOG00000008675	trmt13	95	91.176	ENSXMAG00000010765	trmt13	99	91.176	Xiphophorus_maculatus