EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPFOG00000008755 (Gene tree)
Gene ID: 103137511
Gene Symbol: hdlbpb
Alias: -
Full Name: high density lipoprotein binding protein b
Gene Type: protein_coding
Species: Poecilia_formosa
Status: putative
Strand: Minus strand
Length: 16719 bases
Position: chrKI519651.1:584744-601462
Accession: ZDB-GENE-030131-6822
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPFOP00000009059	KH_1	PF00013.29	2.3e-187	1	14
ENSPFOP00000009059	KH_1	PF00013.29	2.3e-187	2	14
ENSPFOP00000009059	KH_1	PF00013.29	2.3e-187	3	14
ENSPFOP00000009059	KH_1	PF00013.29	2.3e-187	4	14
ENSPFOP00000009059	KH_1	PF00013.29	2.3e-187	5	14
ENSPFOP00000009059	KH_1	PF00013.29	2.3e-187	6	14
ENSPFOP00000009059	KH_1	PF00013.29	2.3e-187	7	14
ENSPFOP00000009059	KH_1	PF00013.29	2.3e-187	8	14
ENSPFOP00000009059	KH_1	PF00013.29	2.3e-187	9	14
ENSPFOP00000009059	KH_1	PF00013.29	2.3e-187	10	14
ENSPFOP00000009059	KH_1	PF00013.29	2.3e-187	11	14
ENSPFOP00000009059	KH_1	PF00013.29	2.3e-187	12	14
ENSPFOP00000009059	KH_1	PF00013.29	2.3e-187	13	14
ENSPFOP00000009059	KH_1	PF00013.29	2.3e-187	14	14

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPFOT00000009071	-	3849	-	ENSPFOP00000009059	1282 (aa)	-	A0A087XTF6

Gene Model

Click here to download ENSPFOG00000008755's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000008755's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPFOG00000008755	hdlbpb	100	70.529	ENSPFOG00000000236	hdlbpa	100	70.373

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPFOG00000008755	hdlbpb	100	94.930	ENSAPOG00000006904	hdlbpb	100	94.930	Acanthochromis_polyacanthus
ENSPFOG00000008755	hdlbpb	100	89.286	ENSACIG00000016154	hdlbpb	100	89.674	Amphilophus_citrinellus
ENSPFOG00000008755	hdlbpb	100	95.632	ENSAOCG00000004083	hdlbpb	100	95.632	Amphiprion_ocellaris
ENSPFOG00000008755	hdlbpb	100	95.554	ENSAPEG00000012270	hdlbpb	100	95.554	Amphiprion_percula
ENSPFOG00000008755	hdlbpb	100	94.852	ENSATEG00000019877	hdlbpb	100	94.852	Anabas_testudineus
ENSPFOG00000008755	hdlbpb	100	81.435	ENSACAG00000003606	-	100	81.435	Anolis_carolinensis
ENSPFOG00000008755	hdlbpb	100	94.930	ENSACLG00000006618	hdlbpb	100	94.930	Astatotilapia_calliptera
ENSPFOG00000008755	hdlbpb	100	77.043	ENSAMXG00000019946	hdlbpb	100	77.043	Astyanax_mexicanus
ENSPFOG00000008755	hdlbpb	100	93.682	ENSCSEG00000000955	hdlbpb	100	93.857	Cynoglossus_semilaevis
ENSPFOG00000008755	hdlbpb	100	96.646	ENSCVAG00000005345	hdlbpb	100	96.646	Cyprinodon_variegatus
ENSPFOG00000008755	hdlbpb	99	84.621	ENSDARG00000061864	hdlbpb	99	84.621	Danio_rerio
ENSPFOG00000008755	hdlbpb	92	68.861	ENSEBUG00000005304	hdlbpb	97	68.692	Eptatretus_burgeri
ENSPFOG00000008755	hdlbpb	100	66.079	ENSELUG00000019925	hdlbpb	100	77.407	Esox_lucius
ENSPFOG00000008755	hdlbpb	87	34.365	ENSFHEG00000001701	hdlbpb	100	91.732	Fundulus_heteroclitus
ENSPFOG00000008755	hdlbpb	95	86.854	ENSGMOG00000004522	hdlbpb	78	86.854	Gadus_morhua
ENSPFOG00000008755	hdlbpb	100	97.894	ENSGAFG00000005278	hdlbpb	100	97.894	Gambusia_affinis
ENSPFOG00000008755	hdlbpb	99	90.788	ENSGACG00000019361	hdlbpb	100	91.179	Gasterosteus_aculeatus
ENSPFOG00000008755	hdlbpb	100	94.774	ENSHBUG00000018434	hdlbpb	100	94.774	Haplochromis_burtoni
ENSPFOG00000008755	hdlbpb	100	84.502	ENSIPUG00000003291	HDLBP	100	84.927	Ictalurus_punctatus
ENSPFOG00000008755	hdlbpb	100	95.710	ENSKMAG00000016562	hdlbpb	100	95.710	Kryptolebias_marmoratus
ENSPFOG00000008755	hdlbpb	100	94.306	ENSLBEG00000027855	hdlbpb	100	94.306	Labrus_bergylta
ENSPFOG00000008755	hdlbpb	100	73.152	ENSLACG00000007661	hdlbpb	100	73.152	Latimeria_chalumnae
ENSPFOG00000008755	hdlbpb	100	81.903	ENSLOCG00000013909	hdlbpb	100	81.903	Lepisosteus_oculatus
ENSPFOG00000008755	hdlbpb	100	95.164	ENSMAMG00000003035	hdlbpb	100	95.164	Mastacembelus_armatus
ENSPFOG00000008755	hdlbpb	100	94.930	ENSMZEG00005021465	hdlbpb	100	94.930	Maylandia_zebra
ENSPFOG00000008755	hdlbpb	100	93.058	ENSMMOG00000012525	hdlbpb	100	93.370	Mola_mola
ENSPFOG00000008755	hdlbpb	100	92.590	ENSMALG00000008938	hdlbpb	100	92.590	Monopterus_albus
ENSPFOG00000008755	hdlbpb	100	95.008	ENSNBRG00000002236	hdlbpb	100	95.008	Neolamprologus_brichardi
ENSPFOG00000008755	hdlbpb	100	94.774	ENSONIG00000009211	hdlbpb	100	94.848	Oreochromis_niloticus
ENSPFOG00000008755	hdlbpb	100	94.150	ENSORLG00000006581	hdlbpb	100	94.150	Oryzias_latipes
ENSPFOG00000008755	hdlbpb	100	94.228	ENSORLG00020010012	hdlbpb	100	94.228	Oryzias_latipes_hni
ENSPFOG00000008755	hdlbpb	100	94.384	ENSORLG00015006863	hdlbpb	100	94.384	Oryzias_latipes_hsok
ENSPFOG00000008755	hdlbpb	100	94.384	ENSOMEG00000011131	hdlbpb	100	94.384	Oryzias_melastigma
ENSPFOG00000008755	hdlbpb	100	87.598	ENSPKIG00000005966	hdlbpb	100	87.676	Paramormyrops_kingsleyae
ENSPFOG00000008755	hdlbpb	86	92.877	ENSPMGG00000019853	hdlbpb	99	92.877	Periophthalmus_magnuspinnatus
ENSPFOG00000008755	hdlbpb	91	64.238	ENSPMAG00000000249	-	99	64.103	Petromyzon_marinus
ENSPFOG00000008755	hdlbpb	94	74.345	ENSPMAG00000002131	hdlbpb	100	74.345	Petromyzon_marinus
ENSPFOG00000008755	hdlbpb	100	98.752	ENSPLAG00000007055	hdlbpb	100	98.752	Poecilia_latipinna
ENSPFOG00000008755	hdlbpb	100	98.674	ENSPMEG00000001952	hdlbpb	100	98.674	Poecilia_mexicana
ENSPFOG00000008755	hdlbpb	100	98.362	ENSPREG00000012848	hdlbpb	100	98.362	Poecilia_reticulata
ENSPFOG00000008755	hdlbpb	100	94.774	ENSPNYG00000022467	hdlbpb	100	94.774	Pundamilia_nyererei
ENSPFOG00000008755	hdlbpb	100	86.583	ENSPNAG00000011104	hdlbpb	100	86.583	Pygocentrus_nattereri
ENSPFOG00000008755	hdlbpb	100	86.817	ENSSFOG00015023199	hdlbpb	100	86.817	Scleropages_formosus
ENSPFOG00000008755	hdlbpb	100	94.618	ENSSMAG00000008790	hdlbpb	100	94.618	Scophthalmus_maximus
ENSPFOG00000008755	hdlbpb	100	95.476	ENSSDUG00000020694	hdlbpb	100	95.476	Seriola_dumerili
ENSPFOG00000008755	hdlbpb	100	95.008	ENSSLDG00000020807	hdlbpb	100	95.008	Seriola_lalandi_dorsalis
ENSPFOG00000008755	hdlbpb	100	81.747	ENSSPUG00000018688	-	100	81.747	Sphenodon_punctatus
ENSPFOG00000008755	hdlbpb	100	95.632	ENSSPAG00000016969	hdlbpb	100	95.632	Stegastes_partitus
ENSPFOG00000008755	hdlbpb	98	91.151	ENSTRUG00000012888	hdlbpb	99	91.151	Takifugu_rubripes
ENSPFOG00000008755	hdlbpb	99	92.763	ENSTNIG00000002555	hdlbpb	100	92.763	Tetraodon_nigroviridis
ENSPFOG00000008755	hdlbpb	100	84.923	ENSXCOG00000001797	hdlbpb	100	84.923	Xiphophorus_couchianus
ENSPFOG00000008755	hdlbpb	100	97.504	ENSXMAG00000015633	hdlbpb	100	97.504	Xiphophorus_maculatus