EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPFOG00000008841 (Gene tree)
Gene ID: 103156676
Gene Symbol: -
Alias: -
Full Name: ovo like transcriptional repressor 1
Gene Type: protein_coding
Species: Poecilia_formosa
Status: putative
Strand: Minus strand
Length: 14887 bases
Position: chrKI520102.1:297500-312386
Accession: 103156676
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPFOP00000024919	zf-C2H2	PF00096.26	2.8e-15	1	2
ENSPFOP00000024919	zf-C2H2	PF00096.26	2.8e-15	2	2
ENSPFOP00000008809	zf-C2H2	PF00096.26	7.8e-15	1	2
ENSPFOP00000008809	zf-C2H2	PF00096.26	7.8e-15	2	2
ENSPFOP00000029919	zf-C2H2	PF00096.26	2.5e-13	1	2
ENSPFOP00000029919	zf-C2H2	PF00096.26	2.5e-13	2	2
ENSPFOP00000024919	zf-met	PF12874.7	0.00028	1	2
ENSPFOP00000024919	zf-met	PF12874.7	0.00028	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPFOT00000008821	-	2021	-	ENSPFOP00000008809	342 (aa)	XP_007578874	A0A087XSQ6
ENSPFOT00000028157	-	1949	-	ENSPFOP00000029919	276 (aa)	-	A0A096MES8
ENSPFOT00000028378	-	1802	-	ENSPFOP00000024919	269 (aa)	-	A0A096M0H8

Gene Model

Click here to download ENSPFOG00000008841's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000008841's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPFOG00000008841	-	99	57.507	ENSAMXG00000011046	ovol1a	99	56.941	Astyanax_mexicanus
ENSPFOG00000008841	-	97	43.820	ENSAMXG00000041879	ovol1b	98	43.195	Astyanax_mexicanus
ENSPFOG00000008841	-	98	56.849	ENSDARG00000076472	ovol1a	73	84.848	Danio_rerio
ENSPFOG00000008841	-	96	46.884	ENSDARG00000078256	ovol1b	99	46.291	Danio_rerio
ENSPFOG00000008841	-	100	87.879	ENSELUG00000000343	ovol1a	99	56.131	Esox_lucius
ENSPFOG00000008841	-	100	100.000	ENSFHEG00000002773	-	100	83.090	Fundulus_heteroclitus
ENSPFOG00000008841	-	100	68.214	ENSGACG00000018794	ovol1a	89	83.333	Gasterosteus_aculeatus
ENSPFOG00000008841	-	100	66.087	ENSHCOG00000015860	ovol1a	100	66.087	Hippocampus_comes
ENSPFOG00000008841	-	100	75.802	ENSKMAG00000002605	-	100	75.802	Kryptolebias_marmoratus
ENSPFOG00000008841	-	100	74.212	ENSMAMG00000009768	ovol1a	100	73.352	Mastacembelus_armatus
ENSPFOG00000008841	-	100	100.000	ENSMALG00000008421	ovol1a	100	73.333	Monopterus_albus
ENSPFOG00000008841	-	100	54.153	ENSPKIG00000024718	ovol1a	100	54.366	Paramormyrops_kingsleyae
ENSPFOG00000008841	-	85	50.000	ENSPNAG00000016198	ovol1b	94	49.583	Pygocentrus_nattereri
ENSPFOG00000008841	-	100	57.143	ENSPNAG00000020630	ovol1a	100	55.556	Pygocentrus_nattereri
ENSPFOG00000008841	-	90	100.000	ENSSDUG00000009846	ovol1a	100	73.315	Seriola_dumerili
ENSPFOG00000008841	-	74	78.744	ENSXCOG00000006461	-	78	79.227	Xiphophorus_couchianus