EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPFOG00000009338 (Gene tree)
Gene ID: 103136652
Gene Symbol: rbfox1l
Alias: -
Full Name: RNA binding protein fox-1 homolog 1-like
Gene Type: protein_coding
Species: Poecilia_formosa
Status: putative
Strand: Plus strand
Length: 14826 bases
Position: chrKI519644.1:486272-501097
Accession: 103136652
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPFOP00000009377	Fox-1_C	PF12414.8	5.4e-34	1	1
ENSPFOP00000009377	RRM_1	PF00076.22	8.3e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPFOT00000009390	-	3545	-	ENSPFOP00000009377	381 (aa)	XP_007550054	A0A087XUC4

Gene Model

Click here to download ENSPFOG00000009338's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000009338's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPFOG00000009338	rbfox1l	88	60.058	ENSPFOG00000018294	rbfox3b	78	63.208
ENSPFOG00000009338	rbfox1l	63	60.000	ENSPFOG00000001869	-	100	54.448
ENSPFOG00000009338	rbfox1l	63	64.885	ENSPFOG00000014209	rbfox2	68	59.105

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPFOG00000009338	rbfox1l	97	89.757	ENSAPOG00000016304	rbfox1l	98	90.027	Acanthochromis_polyacanthus
ENSPFOG00000009338	rbfox1l	100	81.723	ENSACIG00000006441	rbfox1l	100	81.723	Amphilophus_citrinellus
ENSPFOG00000009338	rbfox1l	83	86.164	ENSAOCG00000020938	rbfox1l	99	86.647	Amphiprion_ocellaris
ENSPFOG00000009338	rbfox1l	100	90.339	ENSAPEG00000008232	rbfox1l	100	90.601	Amphiprion_percula
ENSPFOG00000009338	rbfox1l	100	85.640	ENSATEG00000022649	rbfox1l	100	85.640	Anabas_testudineus
ENSPFOG00000009338	rbfox1l	65	71.937	ENSACAG00000011931	-	91	72.332	Anolis_carolinensis
ENSPFOG00000009338	rbfox1l	100	88.512	ENSACLG00000021394	rbfox1l	100	88.512	Astatotilapia_calliptera
ENSPFOG00000009338	rbfox1l	100	84.715	ENSAMXG00000010470	rbfox1l	100	84.197	Astyanax_mexicanus
ENSPFOG00000009338	rbfox1l	66	69.291	ENSCPBG00000010944	-	100	58.205	Chrysemys_picta_bellii
ENSPFOG00000009338	rbfox1l	100	86.198	ENSCSEG00000018898	rbfox1l	100	85.677	Cynoglossus_semilaevis
ENSPFOG00000009338	rbfox1l	100	93.211	ENSCVAG00000007986	rbfox1l	100	93.211	Cyprinodon_variegatus
ENSPFOG00000009338	rbfox1l	100	82.383	ENSDARG00000021184	rbfox1l	100	83.161	Danio_rerio
ENSPFOG00000009338	rbfox1l	100	80.916	ENSELUG00000015077	rbfox1l	100	82.697	Esox_lucius
ENSPFOG00000009338	rbfox1l	79	97.561	ENSFHEG00000016557	rbfox1l	95	97.561	Fundulus_heteroclitus
ENSPFOG00000009338	rbfox1l	100	81.201	ENSGMOG00000005040	rbfox1l	100	81.201	Gadus_morhua
ENSPFOG00000009338	rbfox1l	92	97.159	ENSGAFG00000013211	rbfox1l	97	97.159	Gambusia_affinis
ENSPFOG00000009338	rbfox1l	100	87.728	ENSGACG00000010757	rbfox1l	100	87.728	Gasterosteus_aculeatus
ENSPFOG00000009338	rbfox1l	66	69.291	ENSGAGG00000012440	-	87	71.765	Gopherus_agassizii
ENSPFOG00000009338	rbfox1l	100	88.512	ENSHBUG00000013406	rbfox1l	100	88.512	Haplochromis_burtoni
ENSPFOG00000009338	rbfox1l	100	84.375	ENSHCOG00000020771	rbfox1l	100	85.417	Hippocampus_comes
ENSPFOG00000009338	rbfox1l	99	76.702	ENSIPUG00000000065	rbfox1l	99	79.888	Ictalurus_punctatus
ENSPFOG00000009338	rbfox1l	100	89.610	ENSKMAG00000005146	rbfox1l	100	90.390	Kryptolebias_marmoratus
ENSPFOG00000009338	rbfox1l	100	90.862	ENSLBEG00000017089	rbfox1l	100	90.862	Labrus_bergylta
ENSPFOG00000009338	rbfox1l	100	90.862	ENSMAMG00000019480	rbfox1l	100	90.862	Mastacembelus_armatus
ENSPFOG00000009338	rbfox1l	100	88.512	ENSMZEG00005016374	rbfox1l	100	88.512	Maylandia_zebra
ENSPFOG00000009338	rbfox1l	100	87.206	ENSMMOG00000016530	rbfox1l	100	87.206	Mola_mola
ENSPFOG00000009338	rbfox1l	100	85.901	ENSMALG00000009384	rbfox1l	100	85.901	Monopterus_albus
ENSPFOG00000009338	rbfox1l	100	87.467	ENSNBRG00000003346	rbfox1l	100	87.467	Neolamprologus_brichardi
ENSPFOG00000009338	rbfox1l	100	89.034	ENSONIG00000012754	rbfox1l	100	89.034	Oreochromis_niloticus
ENSPFOG00000009338	rbfox1l	100	89.556	ENSORLG00000011269	rbfox1l	100	89.556	Oryzias_latipes
ENSPFOG00000009338	rbfox1l	100	90.078	ENSORLG00020000162	rbfox1l	100	90.339	Oryzias_latipes_hni
ENSPFOG00000009338	rbfox1l	100	90.078	ENSORLG00015013464	rbfox1l	100	90.339	Oryzias_latipes_hsok
ENSPFOG00000009338	rbfox1l	100	90.339	ENSOMEG00000010584	rbfox1l	100	90.339	Oryzias_melastigma
ENSPFOG00000009338	rbfox1l	100	86.198	ENSPKIG00000012029	rbfox1l	100	86.198	Paramormyrops_kingsleyae
ENSPFOG00000009338	rbfox1l	100	81.250	ENSPMGG00000012082	rbfox1l	100	81.250	Periophthalmus_magnuspinnatus
ENSPFOG00000009338	rbfox1l	85	88.615	ENSPLAG00000012816	rbfox1l	99	88.615	Poecilia_latipinna
ENSPFOG00000009338	rbfox1l	100	95.013	ENSPMEG00000017597	rbfox1l	100	95.013	Poecilia_mexicana
ENSPFOG00000009338	rbfox1l	100	93.701	ENSPREG00000007940	rbfox1l	100	93.701	Poecilia_reticulata
ENSPFOG00000009338	rbfox1l	100	88.773	ENSPNYG00000002098	rbfox1l	100	88.773	Pundamilia_nyererei
ENSPFOG00000009338	rbfox1l	100	82.171	ENSPNAG00000001620	rbfox1l	100	83.979	Pygocentrus_nattereri
ENSPFOG00000009338	rbfox1l	100	81.818	ENSSFOG00015000675	rbfox1l	100	83.117	Scleropages_formosus
ENSPFOG00000009338	rbfox1l	100	87.435	ENSSMAG00000013090	rbfox1l	100	87.435	Scophthalmus_maximus
ENSPFOG00000009338	rbfox1l	100	85.861	ENSSDUG00000008705	rbfox1l	100	85.604	Seriola_dumerili
ENSPFOG00000009338	rbfox1l	100	86.340	ENSSLDG00000022256	rbfox1l	100	86.082	Seriola_lalandi_dorsalis
ENSPFOG00000009338	rbfox1l	100	90.078	ENSSPAG00000016620	rbfox1l	100	90.339	Stegastes_partitus
ENSPFOG00000009338	rbfox1l	96	83.514	ENSTRUG00000015905	rbfox1l	100	83.784	Takifugu_rubripes
ENSPFOG00000009338	rbfox1l	65	81.784	ENSTNIG00000008088	rbfox1l	100	82.900	Tetraodon_nigroviridis
ENSPFOG00000009338	rbfox1l	100	97.900	ENSXMAG00000023471	rbfox1l	100	97.900	Xiphophorus_maculatus