EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: ENSPFOG00000009640 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: serine/arginine-rich splicing factor 1
Gene Type: protein_coding
Species: Poecilia_formosa
Status: putative
Strand: Minus strand
Length: 19412 bases
Position: chrKI519817.1:907251-926662
Accession: 103148541
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPFOP00000009586	RRM_1	PF00076.22	2.7e-32	1	2
ENSPFOP00000009586	RRM_1	PF00076.22	2.7e-32	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPFOT00000009599	-	1065	XM_007567363	ENSPFOP00000009586	245 (aa)	XP_007567424	A0A087XUY3

Gene Model

Click here to download ENSPFOG00000009640's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000009640's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPFOG00000009640	-	66	41.530	ENSPFOG00000022993	srsf5a	56	39.785
ENSPFOG00000009640	-	72	67.033	ENSPFOG00000019792	srsf9	73	67.033
ENSPFOG00000009640	-	79	87.310	ENSPFOG00000018325	-	69	87.565
ENSPFOG00000009640	-	81	39.908	ENSPFOG00000006437	srsf6a	54	38.532
ENSPFOG00000009640	-	64	43.094	ENSPFOG00000017700	srsf5b	56	46.821
ENSPFOG00000009640	-	73	100.000	ENSPFOG00000009643	-	99	100.000