EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPFOG00000009895 (Gene tree)
Gene ID: 103148005
Gene Symbol: rnpc3
Alias: -
Full Name: RNA binding region (RNP1%2C RRM) containing 3
Gene Type: protein_coding
Species: Poecilia_formosa
Status: putative
Strand: Minus strand
Length: 16408 bases
Position: chrKI519803.1:980944-997351
Accession: 103148005
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPFOP00000009957	RRM_1	PF00076.22	9.8e-16	1	2
ENSPFOP00000009957	RRM_1	PF00076.22	9.8e-16	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPFOT00000009972	-	2499	-	ENSPFOP00000009957	507 (aa)	XP_007566658	A0A087XW04

Gene Model

Click here to download ENSPFOG00000009895's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000009895's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPFOG00000009895	rnpc3	97	52.918	ENSG00000185946	RNPC3	96	55.639	Homo_sapiens
ENSPFOG00000009895	rnpc3	99	80.792	ENSAPOG00000017371	rnpc3	99	80.594	Acanthochromis_polyacanthus
ENSPFOG00000009895	rnpc3	97	53.213	ENSAMEG00000001694	RNPC3	95	52.988	Ailuropoda_melanoleuca
ENSPFOG00000009895	rnpc3	99	76.621	ENSACIG00000021043	rnpc3	99	76.817	Amphilophus_citrinellus
ENSPFOG00000009895	rnpc3	99	80.906	ENSAOCG00000014052	rnpc3	98	80.906	Amphiprion_ocellaris
ENSPFOG00000009895	rnpc3	99	80.709	ENSAPEG00000008739	rnpc3	98	80.709	Amphiprion_percula
ENSPFOG00000009895	rnpc3	99	77.583	ENSATEG00000021263	rnpc3	99	77.282	Anabas_testudineus
ENSPFOG00000009895	rnpc3	89	55.482	ENSAPLG00000015605	RNPC3	99	54.605	Anas_platyrhynchos
ENSPFOG00000009895	rnpc3	95	54.192	ENSACAG00000002029	RNPC3	96	52.000	Anolis_carolinensis
ENSPFOG00000009895	rnpc3	97	52.610	ENSANAG00000019950	RNPC3	96	52.390	Aotus_nancymaae
ENSPFOG00000009895	rnpc3	99	79.487	ENSACLG00000014702	rnpc3	99	79.487	Astatotilapia_calliptera
ENSPFOG00000009895	rnpc3	100	62.963	ENSAMXG00000033372	rnpc3	100	62.963	Astyanax_mexicanus
ENSPFOG00000009895	rnpc3	99	52.860	ENSBTAG00000019091	RNPC3	97	52.860	Bos_taurus
ENSPFOG00000009895	rnpc3	97	52.209	ENSCJAG00000035686	RNPC3	95	52.121	Callithrix_jacchus
ENSPFOG00000009895	rnpc3	97	53.320	ENSCAFG00000019972	RNPC3	96	53.094	Canis_familiaris
ENSPFOG00000009895	rnpc3	97	53.320	ENSCAFG00020011300	RNPC3	96	53.094	Canis_lupus_dingo
ENSPFOG00000009895	rnpc3	97	53.678	ENSCHIG00000020361	RNPC3	95	53.414	Capra_hircus
ENSPFOG00000009895	rnpc3	97	52.610	ENSTSYG00000030256	RNPC3	96	52.390	Carlito_syrichta
ENSPFOG00000009895	rnpc3	86	43.665	ENSCAPG00000013600	RNPC3	97	43.864	Cavia_aperea
ENSPFOG00000009895	rnpc3	97	52.008	ENSCPOG00000031638	RNPC3	95	52.314	Cavia_porcellus
ENSPFOG00000009895	rnpc3	97	52.410	ENSCCAG00000024301	RNPC3	96	52.191	Cebus_capucinus
ENSPFOG00000009895	rnpc3	97	52.811	ENSCATG00000002086	RNPC3	96	52.590	Cercocebus_atys
ENSPFOG00000009895	rnpc3	97	41.046	ENSCATG00000035930	-	52	48.163	Cercocebus_atys
ENSPFOG00000009895	rnpc3	97	50.973	ENSCLAG00000005169	RNPC3	95	51.503	Chinchilla_lanigera
ENSPFOG00000009895	rnpc3	97	52.811	ENSCSAG00000001519	RNPC3	96	52.590	Chlorocebus_sabaeus
ENSPFOG00000009895	rnpc3	96	55.777	ENSCPBG00000028311	RNPC3	95	55.578	Chrysemys_picta_bellii
ENSPFOG00000009895	rnpc3	94	36.289	ENSCSAVG00000002800	-	76	54.264	Ciona_savignyi
ENSPFOG00000009895	rnpc3	97	52.410	ENSCANG00000031444	RNPC3	96	52.191	Colobus_angolensis_palliatus
ENSPFOG00000009895	rnpc3	96	53.831	ENSCGRG00001019276	Rnpc3	95	53.831	Cricetulus_griseus_chok1gshd
ENSPFOG00000009895	rnpc3	89	51.747	ENSCGRG00000000053	Rnpc3	99	51.747	Cricetulus_griseus_crigri
ENSPFOG00000009895	rnpc3	99	73.016	ENSCSEG00000013475	rnpc3	99	73.016	Cynoglossus_semilaevis
ENSPFOG00000009895	rnpc3	99	85.855	ENSCVAG00000002645	rnpc3	99	85.855	Cyprinodon_variegatus
ENSPFOG00000009895	rnpc3	99	62.868	ENSDARG00000011247	rnpc3	94	69.714	Danio_rerio
ENSPFOG00000009895	rnpc3	99	52.465	ENSDNOG00000047498	-	97	52.465	Dasypus_novemcinctus
ENSPFOG00000009895	rnpc3	99	51.874	ENSDNOG00000044555	-	97	51.874	Dasypus_novemcinctus
ENSPFOG00000009895	rnpc3	97	52.286	ENSDORG00000027343	Rnpc3	96	52.286	Dipodomys_ordii
ENSPFOG00000009895	rnpc3	97	50.584	ENSEBUG00000002068	rnpc3	96	50.197	Eptatretus_burgeri
ENSPFOG00000009895	rnpc3	97	53.693	ENSEASG00005015957	RNPC3	95	53.693	Equus_asinus_asinus
ENSPFOG00000009895	rnpc3	97	53.892	ENSECAG00000021148	RNPC3	95	53.892	Equus_caballus
ENSPFOG00000009895	rnpc3	99	67.424	ENSELUG00000002264	rnpc3	99	64.773	Esox_lucius
ENSPFOG00000009895	rnpc3	97	53.400	ENSFCAG00000024312	RNPC3	96	53.400	Felis_catus
ENSPFOG00000009895	rnpc3	89	55.263	ENSFALG00000002580	RNPC3	99	53.953	Ficedula_albicollis
ENSPFOG00000009895	rnpc3	98	52.465	ENSFDAG00000019948	RNPC3	97	52.663	Fukomys_damarensis
ENSPFOG00000009895	rnpc3	99	79.324	ENSFHEG00000020647	rnpc3	99	79.125	Fundulus_heteroclitus
ENSPFOG00000009895	rnpc3	98	68.127	ENSGMOG00000019213	rnpc3	97	67.665	Gadus_morhua
ENSPFOG00000009895	rnpc3	96	55.870	ENSGALG00000005162	RNPC3	88	55.061	Gallus_gallus
ENSPFOG00000009895	rnpc3	100	94.106	ENSGAFG00000017236	rnpc3	100	94.106	Gambusia_affinis
ENSPFOG00000009895	rnpc3	99	76.634	ENSGACG00000002048	rnpc3	99	76.758	Gasterosteus_aculeatus
ENSPFOG00000009895	rnpc3	96	56.175	ENSGAGG00000008438	RNPC3	94	55.777	Gopherus_agassizii
ENSPFOG00000009895	rnpc3	97	47.571	ENSGGOG00000026201	-	95	47.166	Gorilla_gorilla
ENSPFOG00000009895	rnpc3	82	77.083	ENSHBUG00000015966	rnpc3	85	77.628	Haplochromis_burtoni
ENSPFOG00000009895	rnpc3	97	52.610	ENSHGLG00000001708	RNPC3	95	52.610	Heterocephalus_glaber_female
ENSPFOG00000009895	rnpc3	97	52.610	ENSHGLG00100003005	RNPC3	95	52.610	Heterocephalus_glaber_male
ENSPFOG00000009895	rnpc3	99	74.653	ENSHCOG00000017135	rnpc3	99	74.653	Hippocampus_comes
ENSPFOG00000009895	rnpc3	99	60.784	ENSIPUG00000002916	rnpc3	99	62.549	Ictalurus_punctatus
ENSPFOG00000009895	rnpc3	97	51.904	ENSSTOG00000025020	RNPC3	95	51.904	Ictidomys_tridecemlineatus
ENSPFOG00000009895	rnpc3	96	52.314	ENSJJAG00000010203	Rnpc3	96	52.286	Jaculus_jaculus
ENSPFOG00000009895	rnpc3	99	80.716	ENSKMAG00000017358	rnpc3	99	80.318	Kryptolebias_marmoratus
ENSPFOG00000009895	rnpc3	100	78.978	ENSLBEG00000024901	rnpc3	98	78.978	Labrus_bergylta
ENSPFOG00000009895	rnpc3	99	56.890	ENSLACG00000005720	RNPC3	92	54.403	Latimeria_chalumnae
ENSPFOG00000009895	rnpc3	99	61.341	ENSLOCG00000007986	rnpc3	99	58.431	Lepisosteus_oculatus
ENSPFOG00000009895	rnpc3	97	53.320	ENSLAFG00000032342	RNPC3	95	53.320	Loxodonta_africana
ENSPFOG00000009895	rnpc3	97	52.811	ENSMFAG00000002004	RNPC3	96	52.590	Macaca_fascicularis
ENSPFOG00000009895	rnpc3	97	40.404	ENSMFAG00000002917	-	54	47.368	Macaca_fascicularis
ENSPFOG00000009895	rnpc3	79	49.537	ENSMMUG00000002098	-	85	49.537	Macaca_mulatta
ENSPFOG00000009895	rnpc3	97	52.610	ENSMMUG00000018039	RNPC3	96	52.390	Macaca_mulatta
ENSPFOG00000009895	rnpc3	97	49.799	ENSMNEG00000033950	RNPC3	95	49.602	Macaca_nemestrina
ENSPFOG00000009895	rnpc3	97	52.811	ENSMLEG00000033628	RNPC3	96	52.590	Mandrillus_leucophaeus
ENSPFOG00000009895	rnpc3	97	41.903	ENSMLEG00000034644	-	95	40.514	Mandrillus_leucophaeus
ENSPFOG00000009895	rnpc3	99	69.126	ENSMAMG00000007496	rnpc3	99	69.126	Mastacembelus_armatus
ENSPFOG00000009895	rnpc3	99	79.183	ENSMZEG00005020233	rnpc3	99	79.183	Maylandia_zebra
ENSPFOG00000009895	rnpc3	89	54.167	ENSMGAG00000006381	RNPC3	99	54.013	Meleagris_gallopavo
ENSPFOG00000009895	rnpc3	97	54.326	ENSMAUG00000001358	Rnpc3	96	53.707	Mesocricetus_auratus
ENSPFOG00000009895	rnpc3	97	53.012	ENSMICG00000029591	RNPC3	95	53.012	Microcebus_murinus
ENSPFOG00000009895	rnpc3	97	53.815	ENSMOCG00000013423	Rnpc3	96	53.586	Microtus_ochrogaster
ENSPFOG00000009895	rnpc3	99	71.627	ENSMMOG00000005309	rnpc3	99	72.619	Mola_mola
ENSPFOG00000009895	rnpc3	97	53.414	ENSMODG00000002946	RNPC3	95	53.629	Monodelphis_domestica
ENSPFOG00000009895	rnpc3	98	72.619	ENSMALG00000015471	rnpc3	99	72.619	Monopterus_albus
ENSPFOG00000009895	rnpc3	97	54.032	MGP_CAROLIEiJ_G0025555	Rnpc3	96	54.032	Mus_caroli
ENSPFOG00000009895	rnpc3	97	53.614	ENSMUSG00000027981	Rnpc3	99	51.915	Mus_musculus
ENSPFOG00000009895	rnpc3	97	53.386	MGP_PahariEiJ_G0027001	Rnpc3	97	53.386	Mus_pahari
ENSPFOG00000009895	rnpc3	97	50.584	MGP_SPRETEiJ_G0026505	Rnpc3	96	53.614	Mus_spretus
ENSPFOG00000009895	rnpc3	97	53.427	ENSMPUG00000007349	RNPC3	96	53.200	Mustela_putorius_furo
ENSPFOG00000009895	rnpc3	96	54.453	ENSMLUG00000028743	RNPC3	96	54.217	Myotis_lucifugus
ENSPFOG00000009895	rnpc3	97	53.521	ENSNGAG00000010939	Rnpc3	95	53.521	Nannospalax_galili
ENSPFOG00000009895	rnpc3	99	79.882	ENSNBRG00000012196	rnpc3	96	79.882	Neolamprologus_brichardi
ENSPFOG00000009895	rnpc3	97	52.918	ENSNLEG00000012013	RNPC3	96	52.695	Nomascus_leucogenys
ENSPFOG00000009895	rnpc3	97	52.227	ENSODEG00000007612	RNPC3	96	52.008	Octodon_degus
ENSPFOG00000009895	rnpc3	99	80.392	ENSONIG00000004770	rnpc3	100	81.301	Oreochromis_niloticus
ENSPFOG00000009895	rnpc3	91	54.701	ENSOANG00000008220	RNPC3	99	53.205	Ornithorhynchus_anatinus
ENSPFOG00000009895	rnpc3	97	52.906	ENSOCUG00000004016	RNPC3	95	53.000	Oryctolagus_cuniculus
ENSPFOG00000009895	rnpc3	100	78.193	ENSORLG00000005694	rnpc3	100	78.193	Oryzias_latipes
ENSPFOG00000009895	rnpc3	100	78.585	ENSORLG00020005513	rnpc3	100	78.585	Oryzias_latipes_hni
ENSPFOG00000009895	rnpc3	100	78.193	ENSORLG00015002179	rnpc3	100	78.193	Oryzias_latipes_hsok
ENSPFOG00000009895	rnpc3	99	78.812	ENSOMEG00000017737	rnpc3	99	78.812	Oryzias_melastigma
ENSPFOG00000009895	rnpc3	97	53.280	ENSOGAG00000026182	RNPC3	96	53.280	Otolemur_garnettii
ENSPFOG00000009895	rnpc3	97	53.678	ENSOARG00000018719	RNPC3	95	53.414	Ovis_aries
ENSPFOG00000009895	rnpc3	97	52.705	ENSPPAG00000037459	RNPC3	96	52.485	Pan_paniscus
ENSPFOG00000009895	rnpc3	97	47.485	ENSPPAG00000030278	-	97	46.988	Pan_paniscus
ENSPFOG00000009895	rnpc3	97	53.400	ENSPPRG00000020246	RNPC3	96	53.400	Panthera_pardus
ENSPFOG00000009895	rnpc3	97	53.400	ENSPTIG00000009887	RNPC3	97	53.400	Panthera_tigris_altaica
ENSPFOG00000009895	rnpc3	97	52.610	ENSPTRG00000033902	RNPC3	96	52.390	Pan_troglodytes
ENSPFOG00000009895	rnpc3	97	46.964	ENSPTRG00000044227	-	97	46.761	Pan_troglodytes
ENSPFOG00000009895	rnpc3	97	52.918	ENSPANG00000012137	RNPC3	96	52.695	Papio_anubis
ENSPFOG00000009895	rnpc3	97	42.063	ENSPANG00000029957	-	51	46.559	Papio_anubis
ENSPFOG00000009895	rnpc3	99	64.356	ENSPKIG00000008828	rnpc3	98	61.569	Paramormyrops_kingsleyae
ENSPFOG00000009895	rnpc3	65	52.553	ENSPSIG00000007396	RNPC3	99	52.853	Pelodiscus_sinensis
ENSPFOG00000009895	rnpc3	99	64.008	ENSPMGG00000011742	rnpc3	99	63.689	Periophthalmus_magnuspinnatus
ENSPFOG00000009895	rnpc3	92	50.743	ENSPEMG00000020112	Rnpc3	99	51.974	Peromyscus_maniculatus_bairdii
ENSPFOG00000009895	rnpc3	97	53.939	ENSPCIG00000004415	-	95	53.939	Phascolarctos_cinereus
ENSPFOG00000009895	rnpc3	100	98.817	ENSPLAG00000012023	rnpc3	100	98.817	Poecilia_latipinna
ENSPFOG00000009895	rnpc3	100	99.803	ENSPMEG00000003663	rnpc3	100	99.803	Poecilia_mexicana
ENSPFOG00000009895	rnpc3	100	98.028	ENSPREG00000010206	rnpc3	100	98.028	Poecilia_reticulata
ENSPFOG00000009895	rnpc3	81	48.921	ENSPPYG00000001102	RNPC3	95	48.694	Pongo_abelii
ENSPFOG00000009895	rnpc3	99	79.290	ENSPNYG00000020603	rnpc3	99	79.290	Pundamilia_nyererei
ENSPFOG00000009895	rnpc3	97	54.016	ENSRNOG00000017310	Rnpc3	95	54.016	Rattus_norvegicus
ENSPFOG00000009895	rnpc3	97	49.098	ENSRBIG00000043897	RNPC3	95	48.907	Rhinopithecus_bieti
ENSPFOG00000009895	rnpc3	97	52.811	ENSRROG00000032334	RNPC3	96	52.590	Rhinopithecus_roxellana
ENSPFOG00000009895	rnpc3	97	52.295	ENSSBOG00000024473	RNPC3	96	52.295	Saimiri_boliviensis_boliviensis
ENSPFOG00000009895	rnpc3	97	53.521	ENSSHAG00000011859	RNPC3	95	53.521	Sarcophilus_harrisii
ENSPFOG00000009895	rnpc3	97	68.072	ENSSFOG00015013055	rnpc3	97	67.800	Scleropages_formosus
ENSPFOG00000009895	rnpc3	99	76.562	ENSSMAG00000020346	rnpc3	99	73.633	Scophthalmus_maximus
ENSPFOG00000009895	rnpc3	99	78.431	ENSSDUG00000006600	rnpc3	99	78.431	Seriola_dumerili
ENSPFOG00000009895	rnpc3	99	78.431	ENSSLDG00000007979	rnpc3	99	78.431	Seriola_lalandi_dorsalis
ENSPFOG00000009895	rnpc3	95	56.619	ENSSPUG00000008539	-	92	55.936	Sphenodon_punctatus
ENSPFOG00000009895	rnpc3	96	52.314	ENSSPUG00000003872	-	92	52.113	Sphenodon_punctatus
ENSPFOG00000009895	rnpc3	99	80.318	ENSSPAG00000005633	rnpc3	99	80.119	Stegastes_partitus
ENSPFOG00000009895	rnpc3	97	51.758	ENSSSCG00000037254	RNPC3	95	51.807	Sus_scrofa
ENSPFOG00000009895	rnpc3	89	55.361	ENSTGUG00000004795	-	99	53.829	Taeniopygia_guttata
ENSPFOG00000009895	rnpc3	99	73.913	ENSTNIG00000018963	rnpc3	99	73.913	Tetraodon_nigroviridis
ENSPFOG00000009895	rnpc3	97	53.012	ENSUMAG00000007775	RNPC3	97	52.883	Ursus_maritimus
ENSPFOG00000009895	rnpc3	97	53.320	ENSVVUG00000000331	RNPC3	96	53.094	Vulpes_vulpes
ENSPFOG00000009895	rnpc3	97	43.110	ENSXETG00000025027	rnpc3	97	42.970	Xenopus_tropicalis
ENSPFOG00000009895	rnpc3	53	91.852	ENSXCOG00000005013	rnpc3	100	92.085	Xiphophorus_couchianus
ENSPFOG00000009895	rnpc3	100	95.678	ENSXMAG00000006495	rnpc3	100	95.678	Xiphophorus_maculatus