EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSPFOG00000010351 (Gene tree)
Gene ID
103135324
Gene Symbol
pabpn1
Alias
-
Full Name
poly(A) binding protein%2C nuclear 1
Gene Type
protein_coding
Species
Poecilia_formosa
Status
putative
Strand
Plus strand
Length
15287 bases
Position
chrKI519634.1:1019568-1034854
Accession
ZDB-GENE-040426-2401
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPFOP00000029614RRM_1PF00076.222.2e-1711
ENSPFOP00000010371RRM_1PF00076.223.6e-1711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPFOT00000028463-4707-ENSPFOP00000029614236 (aa)-A0A096MDX3
ENSPFOT00000010386-3621-ENSPFOP00000010371294 (aa)-A0A087XX68
Gene Model
Click here to download ENSPFOG00000010351's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000010351's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSPFOG00000010351pabpn16261.438ENSPFOG00000007001PABPN1L7651.579
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPFOG00000010351pabpn19970.588ENSG00000258643BCL2L2-PABPN17168.908Homo_sapiens
ENSPFOG00000010351pabpn18680.676ENSG00000100836PABPN19478.107Homo_sapiens
ENSPFOG00000010351pabpn19997.009ENSAPOG00000016425pabpn110097.009Acanthochromis_polyacanthus
ENSPFOG00000010351pabpn18082.723ENSAMEG00000007048BCL2L2-PABPN110080.628Ailuropoda_melanoleuca
ENSPFOG00000010351pabpn110092.568ENSACIG00000021744pabpn110096.629Amphilophus_citrinellus
ENSPFOG00000010351pabpn19997.009ENSAOCG00000015805pabpn110097.009Amphiprion_ocellaris
ENSPFOG00000010351pabpn19997.009ENSAPEG00000009623pabpn110097.009Amphiprion_percula
ENSPFOG00000010351pabpn19997.436ENSATEG00000020531pabpn110097.436Anabas_testudineus
ENSPFOG00000010351pabpn18085.864ENSACAG00000006185-8170.954Anolis_carolinensis
ENSPFOG00000010351pabpn19966.932ENSANAG00000024513-8472.428Aotus_nancymaae
ENSPFOG00000010351pabpn110092.256ENSACLG00000016374pabpn110090.572Astatotilapia_calliptera
ENSPFOG00000010351pabpn19996.154ENSAMXG00000000452pabpn110096.154Astyanax_mexicanus
ENSPFOG00000010351pabpn18276.410ENSBTAG00000050594-6783.523Bos_taurus
ENSPFOG00000010351pabpn18281.122ENSBTAG00000053753-7279.082Bos_taurus
ENSPFOG00000010351pabpn18381.910ENSBTAG00000006884PABPN18666.415Bos_taurus
ENSPFOG00000010351pabpn16158.904WBGene00003904pabp-27158.904Caenorhabditis_elegans
ENSPFOG00000010351pabpn17178.698ENSCJAG00000004407-8476.331Callithrix_jacchus
ENSPFOG00000010351pabpn19874.359ENSCJAG00000007960-8473.077Callithrix_jacchus
ENSPFOG00000010351pabpn18680.676ENSCAFG00000011482PABPN18667.925Canis_familiaris
ENSPFOG00000010351pabpn18680.676ENSCAFG00020007298-8667.547Canis_lupus_dingo
ENSPFOG00000010351pabpn18680.676ENSCAFG00020006651-8667.547Canis_lupus_dingo
ENSPFOG00000010351pabpn18680.676ENSCHIG00000012184PABPN18667.547Capra_hircus
ENSPFOG00000010351pabpn19970.588ENSTSYG00000033996BCL2L2-PABPN19478.107Carlito_syrichta
ENSPFOG00000010351pabpn15980.000ENSCAPG00000009461-9279.231Cavia_aperea
ENSPFOG00000010351pabpn18680.193ENSCPOG00000025574PABPN16878.095Cavia_porcellus
ENSPFOG00000010351pabpn19874.359ENSCCAG00000033954BCL2L2-PABPN18473.077Cebus_capucinus
ENSPFOG00000010351pabpn19874.359ENSCATG00000038536BCL2L2-PABPN18473.077Cercocebus_atys
ENSPFOG00000010351pabpn16480.263ENSCLAG00000012423PABPN15677.632Chinchilla_lanigera
ENSPFOG00000010351pabpn18679.227ENSCSAG00000016036PABPN16877.143Chlorocebus_sabaeus
ENSPFOG00000010351pabpn18971.564ENSCHOG00000004798BCL2L2-PABPN19267.873Choloepus_hoffmanni
ENSPFOG00000010351pabpn17183.432ENSCPBG00000026060-9480.473Chrysemys_picta_bellii
ENSPFOG00000010351pabpn18961.502ENSCING00000012468-7468.862Ciona_intestinalis
ENSPFOG00000010351pabpn17562.222ENSCSAVG00000002001-7371.545Ciona_savignyi
ENSPFOG00000010351pabpn19970.588ENSCANG00000009750BCL2L2-PABPN19478.107Colobus_angolensis_palliatus
ENSPFOG00000010351pabpn18469.347ENSCANG00000030980-8761.925Colobus_angolensis_palliatus
ENSPFOG00000010351pabpn18680.193ENSCGRG00001019696Pabpn19477.515Cricetulus_griseus_chok1gshd
ENSPFOG00000010351pabpn16190.476ENSCGRG00000011102Pabpn19091.034Cricetulus_griseus_crigri
ENSPFOG00000010351pabpn19995.726ENSCSEG00000008774pabpn110095.726Cynoglossus_semilaevis
ENSPFOG00000010351pabpn110097.619ENSCVAG00000003152pabpn110097.619Cyprinodon_variegatus
ENSPFOG00000010351pabpn18052.910ENSDARG00000087996pabpn1l7267.521Danio_rerio
ENSPFOG00000010351pabpn19994.872ENSDARG00000045373pabpn110093.590Danio_rerio
ENSPFOG00000010351pabpn18680.676ENSDNOG00000023682PABPN18667.547Dasypus_novemcinctus
ENSPFOG00000010351pabpn15682.707ENSDORG00000023928-8581.967Dipodomys_ordii
ENSPFOG00000010351pabpn18679.710ENSDORG00000028966-8666.792Dipodomys_ordii
ENSPFOG00000010351pabpn19657.265FBgn0005648Pabp28262.703Drosophila_melanogaster
ENSPFOG00000010351pabpn19972.574ENSEBUG00000002322pabpn19972.340Eptatretus_burgeri
ENSPFOG00000010351pabpn18680.676ENSEASG00005011716PABPN18667.547Equus_asinus_asinus
ENSPFOG00000010351pabpn18580.000ENSECAG00000011652PABPN18267.213Equus_caballus
ENSPFOG00000010351pabpn18678.261ENSEEUG00000012973-7172.381Erinaceus_europaeus
ENSPFOG00000010351pabpn19992.437ENSELUG00000022654pabpn110089.916Esox_lucius
ENSPFOG00000010351pabpn18680.676ENSFCAG00000031922PABPN18667.547Felis_catus
ENSPFOG00000010351pabpn17180.473ENSFDAG00000018381BCL2L2-PABPN19478.107Fukomys_damarensis
ENSPFOG00000010351pabpn19995.726ENSFHEG00000007215pabpn110095.726Fundulus_heteroclitus
ENSPFOG00000010351pabpn110089.456ENSGMOG00000003922pabpn110088.776Gadus_morhua
ENSPFOG00000010351pabpn18381.818ENSGALG00000052930-6181.517Gallus_gallus
ENSPFOG00000010351pabpn19998.718ENSGAFG00000017099pabpn110098.718Gambusia_affinis
ENSPFOG00000010351pabpn110093.197ENSGACG00000002167pabpn110093.197Gasterosteus_aculeatus
ENSPFOG00000010351pabpn19874.359ENSGGOG00000022683-8473.077Gorilla_gorilla
ENSPFOG00000010351pabpn18867.943ENSGGOG00000039675-9162.656Gorilla_gorilla
ENSPFOG00000010351pabpn19365.106ENSGGOG00000025919-6776.923Gorilla_gorilla
ENSPFOG00000010351pabpn19996.581ENSHBUG00000019523pabpn110096.581Haplochromis_burtoni
ENSPFOG00000010351pabpn18668.421ENSHGLG00000018588-6178.049Heterocephalus_glaber_female
ENSPFOG00000010351pabpn17161.538ENSHGLG00000009842-9361.538Heterocephalus_glaber_female
ENSPFOG00000010351pabpn18680.193ENSHGLG00000002927-9191.034Heterocephalus_glaber_female
ENSPFOG00000010351pabpn18668.421ENSHGLG00100015565-8761.200Heterocephalus_glaber_male
ENSPFOG00000010351pabpn17168.391ENSHGLG00100018935-9470.349Heterocephalus_glaber_male
ENSPFOG00000010351pabpn19469.469ENSHGLG00100006673-9191.034Heterocephalus_glaber_male
ENSPFOG00000010351pabpn19995.299ENSHCOG00000004655pabpn110095.299Hippocampus_comes
ENSPFOG00000010351pabpn19987.179ENSIPUG00000000180-9985.897Ictalurus_punctatus
ENSPFOG00000010351pabpn19995.299ENSIPUG00000008085PABPN110095.299Ictalurus_punctatus
ENSPFOG00000010351pabpn17180.473ENSSTOG00000029847BCL2L2-PABPN19478.107Ictidomys_tridecemlineatus
ENSPFOG00000010351pabpn17180.473ENSJJAG00000023507Gm205219478.107Jaculus_jaculus
ENSPFOG00000010351pabpn19996.596ENSKMAG00000018748pabpn110096.596Kryptolebias_marmoratus
ENSPFOG00000010351pabpn19997.436ENSLBEG00000027266pabpn110097.436Labrus_bergylta
ENSPFOG00000010351pabpn17585.000ENSLACG00000000646pabpn19176.056Latimeria_chalumnae
ENSPFOG00000010351pabpn110088.176ENSLOCG00000000796pabpn110087.119Lepisosteus_oculatus
ENSPFOG00000010351pabpn18965.581ENSLOCG00000004694pabpn1l9962.326Lepisosteus_oculatus
ENSPFOG00000010351pabpn16480.921ENSLAFG00000031227-10077.778Loxodonta_africana
ENSPFOG00000010351pabpn16172.727ENSMFAG00000031355-9971.329Macaca_fascicularis
ENSPFOG00000010351pabpn19970.588ENSMFAG00000032183BCL2L2-PABPN19478.107Macaca_fascicularis
ENSPFOG00000010351pabpn18566.505ENSMMUG00000048382-6965.238Macaca_mulatta
ENSPFOG00000010351pabpn19970.588ENSMMUG00000014747BCL2L2-PABPN110077.703Macaca_mulatta
ENSPFOG00000010351pabpn19874.359ENSMNEG00000045065BCL2L2-PABPN18473.077Macaca_nemestrina
ENSPFOG00000010351pabpn17967.553ENSMNEG00000035750-9971.329Macaca_nemestrina
ENSPFOG00000010351pabpn17164.881ENSMLEG00000034623-9969.231Mandrillus_leucophaeus
ENSPFOG00000010351pabpn19970.588ENSMLEG00000043862BCL2L2-PABPN19478.107Mandrillus_leucophaeus
ENSPFOG00000010351pabpn110096.599ENSMAMG00000007979pabpn110096.599Mastacembelus_armatus
ENSPFOG00000010351pabpn110094.558ENSMZEG00005011904pabpn110094.558Maylandia_zebra
ENSPFOG00000010351pabpn19970.588ENSMAUG00000007383Gm205218767.681Mesocricetus_auratus
ENSPFOG00000010351pabpn19874.894ENSMICG00000010002BCL2L2-PABPN18473.840Microcebus_murinus
ENSPFOG00000010351pabpn19970.168ENSMOCG00000018557Gm205218891.034Microtus_ochrogaster
ENSPFOG00000010351pabpn19997.009ENSMMOG00000005405pabpn110097.009Mola_mola
ENSPFOG00000010351pabpn18479.902ENSMODG00000004535-8566.794Monodelphis_domestica
ENSPFOG00000010351pabpn110096.599ENSMALG00000019612pabpn110096.599Monopterus_albus
ENSPFOG00000010351pabpn19970.168MGP_CAROLIEiJ_G0019276Gm205217168.487Mus_caroli
ENSPFOG00000010351pabpn18679.710MGP_CAROLIEiJ_G0019277Pabpn18891.034Mus_caroli
ENSPFOG00000010351pabpn19970.588ENSMUSG00000092232Gm205217168.908Mus_musculus
ENSPFOG00000010351pabpn18680.193ENSMUSG00000022194Pabpn18891.034Mus_musculus
ENSPFOG00000010351pabpn18680.193MGP_PahariEiJ_G0030295Pabpn110095.238Mus_pahari
ENSPFOG00000010351pabpn19970.588MGP_PahariEiJ_G0030294Gm205217168.908Mus_pahari
ENSPFOG00000010351pabpn18680.193MGP_SPRETEiJ_G0020166Pabpn18891.034Mus_spretus
ENSPFOG00000010351pabpn19970.588MGP_SPRETEiJ_G0020165Gm205217168.908Mus_spretus
ENSPFOG00000010351pabpn16680.255ENSMPUG00000006775-8779.592Mustela_putorius_furo
ENSPFOG00000010351pabpn18777.725ENSMLUG00000012452-6976.415Myotis_lucifugus
ENSPFOG00000010351pabpn18081.675ENSMLUG00000003800-10079.581Myotis_lucifugus
ENSPFOG00000010351pabpn18379.397ENSMLUG00000028677-8570.042Myotis_lucifugus
ENSPFOG00000010351pabpn19971.008ENSNGAG00000019529Gm205217169.328Nannospalax_galili
ENSPFOG00000010351pabpn110094.218ENSNBRG00000023955pabpn110096.629Neolamprologus_brichardi
ENSPFOG00000010351pabpn19970.588ENSNLEG00000015007-7478.571Nomascus_leucogenys
ENSPFOG00000010351pabpn18667.633ENSNLEG00000030598-7767.619Nomascus_leucogenys
ENSPFOG00000010351pabpn16458.667ENSNLEG00000035292-9958.000Nomascus_leucogenys
ENSPFOG00000010351pabpn18672.195ENSODEG00000003739-8061.017Octodon_degus
ENSPFOG00000010351pabpn17571.111ENSODEG00000011555-8968.047Octodon_degus
ENSPFOG00000010351pabpn19970.168ENSODEG00000002083BCL2L2-PABPN16878.095Octodon_degus
ENSPFOG00000010351pabpn110094.218ENSONIG00000008112pabpn110094.218Oreochromis_niloticus
ENSPFOG00000010351pabpn16383.108ENSOANG00000009218-10079.054Ornithorhynchus_anatinus
ENSPFOG00000010351pabpn18680.193ENSOCUG00000016174PABPN19567.424Oryctolagus_cuniculus
ENSPFOG00000010351pabpn110096.599ENSORLG00000027900pabpn110096.599Oryzias_latipes
ENSPFOG00000010351pabpn110096.599ENSORLG00020004681pabpn110096.599Oryzias_latipes_hni
ENSPFOG00000010351pabpn110096.599ENSORLG00015000018pabpn110097.009Oryzias_latipes_hsok
ENSPFOG00000010351pabpn110094.558ENSOMEG00000016618pabpn110094.558Oryzias_melastigma
ENSPFOG00000010351pabpn18680.676ENSOGAG00000008710PABPN18667.547Otolemur_garnettii
ENSPFOG00000010351pabpn19970.588ENSOARG00000019336BCL2L2-PABPN16568.908Ovis_aries
ENSPFOG00000010351pabpn19970.588ENSPPAG00000028984BCL2L2-PABPN18779.592Pan_paniscus
ENSPFOG00000010351pabpn17165.868ENSPPAG00000039421-9364.671Pan_paniscus
ENSPFOG00000010351pabpn18680.676ENSPPRG00000010567PABPN18667.547Panthera_pardus
ENSPFOG00000010351pabpn17180.473ENSPTIG00000001063BCL2L2-PABPN19478.107Panthera_tigris_altaica
ENSPFOG00000010351pabpn19961.702ENSPTRG00000047273-9358.498Pan_troglodytes
ENSPFOG00000010351pabpn19874.359ENSPTRG00000006167BCL2L28473.077Pan_troglodytes
ENSPFOG00000010351pabpn18367.839ENSPANG00000023326-9971.329Papio_anubis
ENSPFOG00000010351pabpn19874.359ENSPANG00000021100BCL2L2-PABPN18473.077Papio_anubis
ENSPFOG00000010351pabpn16870.807ENSPKIG00000008340pabpn1l7471.812Paramormyrops_kingsleyae
ENSPFOG00000010351pabpn110093.878ENSPKIG00000008144-10092.857Paramormyrops_kingsleyae
ENSPFOG00000010351pabpn19991.026ENSPKIG00000018052pabpn110090.171Paramormyrops_kingsleyae
ENSPFOG00000010351pabpn15875.000ENSPSIG00000011959-7885.047Pelodiscus_sinensis
ENSPFOG00000010351pabpn19496.847ENSPMGG00000022027pabpn110089.116Periophthalmus_magnuspinnatus
ENSPFOG00000010351pabpn19970.588ENSPEMG00000008332Gm205218891.034Peromyscus_maniculatus_bairdii
ENSPFOG00000010351pabpn17875.000ENSPMAG00000006212pabpn17875.521Petromyzon_marinus
ENSPFOG00000010351pabpn18680.676ENSPCIG00000027751-8667.170Phascolarctos_cinereus
ENSPFOG00000010351pabpn110099.320ENSPLAG00000022696pabpn110099.320Poecilia_latipinna
ENSPFOG00000010351pabpn199100.000ENSPMEG00000020856pabpn1100100.000Poecilia_mexicana
ENSPFOG00000010351pabpn19999.573ENSPREG00000011278pabpn110099.573Poecilia_reticulata
ENSPFOG00000010351pabpn18180.513ENSPPYG00000005663PABPN18667.490Pongo_abelii
ENSPFOG00000010351pabpn17867.358ENSPCAG00000005902PABPN18356.098Procavia_capensis
ENSPFOG00000010351pabpn19874.894ENSPCOG00000028047BCL2L2-PABPN18473.840Propithecus_coquereli
ENSPFOG00000010351pabpn18779.048ENSPVAG00000005270PABPN17966.667Pteropus_vampyrus
ENSPFOG00000010351pabpn19996.581ENSPNYG00000013182pabpn110096.581Pundamilia_nyererei
ENSPFOG00000010351pabpn19995.726ENSPNAG00000023526pabpn110095.726Pygocentrus_nattereri
ENSPFOG00000010351pabpn18860.766ENSPNAG00000021666pabpn1l7871.069Pygocentrus_nattereri
ENSPFOG00000010351pabpn18680.193ENSRNOG00000042195Pabpn18567.681Rattus_norvegicus
ENSPFOG00000010351pabpn18969.953ENSRBIG00000039547-8960.905Rhinopithecus_bieti
ENSPFOG00000010351pabpn19469.912ENSRBIG00000040762BCL2L2-PABPN15282.249Rhinopithecus_bieti
ENSPFOG00000010351pabpn18769.524ENSRBIG00000042811-9564.035Rhinopithecus_bieti
ENSPFOG00000010351pabpn18766.038ENSRROG00000036409-8455.762Rhinopithecus_roxellana
ENSPFOG00000010351pabpn19469.912ENSRROG00000045535BCL2L2-PABPN19478.107Rhinopithecus_roxellana
ENSPFOG00000010351pabpn19365.333ENSRROG00000040409-8961.317Rhinopithecus_roxellana
ENSPFOG00000010351pabpn19966.932ENSSBOG00000026930BCL2L2-PABPN18779.592Saimiri_boliviensis_boliviensis
ENSPFOG00000010351pabpn18082.723ENSSHAG00000014841-8780.105Sarcophilus_harrisii
ENSPFOG00000010351pabpn19860.996ENSSHAG00000007707-9855.932Sarcophilus_harrisii
ENSPFOG00000010351pabpn19995.299ENSSFOG00015014718pabpn110095.299Scleropages_formosus
ENSPFOG00000010351pabpn19988.511ENSSFOG00015012565pabpn110087.234Scleropages_formosus
ENSPFOG00000010351pabpn16868.293ENSSFOG00015015833pabpn1l7768.675Scleropages_formosus
ENSPFOG00000010351pabpn19997.009ENSSMAG00000020157pabpn110097.009Scophthalmus_maximus
ENSPFOG00000010351pabpn110097.279ENSSDUG00000020582pabpn110097.279Seriola_dumerili
ENSPFOG00000010351pabpn19997.436ENSSLDG00000007118pabpn110097.436Seriola_lalandi_dorsalis
ENSPFOG00000010351pabpn17184.615ENSSPUG00000018308-9481.657Sphenodon_punctatus
ENSPFOG00000010351pabpn19995.745ENSSPAG00000021658pabpn110095.745Stegastes_partitus
ENSPFOG00000010351pabpn19970.588ENSSSCG00000002023PABPN18667.547Sus_scrofa
ENSPFOG00000010351pabpn19261.468ENSSSCG00000034805-7957.075Sus_scrofa
ENSPFOG00000010351pabpn19995.726ENSTRUG00000023664pabpn110095.726Takifugu_rubripes
ENSPFOG00000010351pabpn19291.244ENSTNIG00000005369pabpn19093.878Tetraodon_nigroviridis
ENSPFOG00000010351pabpn18680.676ENSUAMG00000024460PABPN16878.571Ursus_americanus
ENSPFOG00000010351pabpn19970.588ENSUMAG00000014288BCL2L2-PABPN17168.908Ursus_maritimus
ENSPFOG00000010351pabpn19970.588ENSVVUG00000019912BCL2L2-PABPN18175.598Vulpes_vulpes
ENSPFOG00000010351pabpn18284.103ENSXETG00000014597pabpn17380.734Xenopus_tropicalis
ENSPFOG00000010351pabpn17487.429ENSXCOG00000005158pabpn19887.429Xiphophorus_couchianus
ENSPFOG00000010351pabpn110099.320ENSXMAG00000006196pabpn110099.320Xiphophorus_maculatus

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