EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPFOG00000010650 (Gene tree)
Gene ID: 103137435
Gene Symbol: si:ch211-117n7.8
Alias: -
Full Name: S1 RNA binding domain 1
Gene Type: protein_coding
Species: Poecilia_formosa
Status: putative
Strand: Plus strand
Length: 52576 bases
Position: chrKI519650.1:2212970-2265545
Accession: 103137435
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPFOP00000010868	S1	PF00575.23	1e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPFOT00000010884	-	6695	XM_007551176	ENSPFOP00000010868	1002 (aa)	XP_007551238	A0A087XYL5

Gene Model

Click here to download ENSPFOG00000010650's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000010650's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPFOG00000010650	si:ch211-117n7.8	97	51.564	ENSG00000068784	SRBD1	98	51.241	Homo_sapiens
ENSPFOG00000010650	si:ch211-117n7.8	100	79.195	ENSAPOG00000005103	si:ch211-117n7.8	100	79.195	Acanthochromis_polyacanthus
ENSPFOG00000010650	si:ch211-117n7.8	93	53.838	ENSAMEG00000005993	SRBD1	98	52.569	Ailuropoda_melanoleuca
ENSPFOG00000010650	si:ch211-117n7.8	97	79.617	ENSACIG00000009875	si:ch211-117n7.8	100	79.738	Amphilophus_citrinellus
ENSPFOG00000010650	si:ch211-117n7.8	100	78.269	ENSAOCG00000024718	si:ch211-117n7.8	100	78.269	Amphiprion_ocellaris
ENSPFOG00000010650	si:ch211-117n7.8	97	79.226	ENSAPEG00000002645	si:ch211-117n7.8	99	79.226	Amphiprion_percula
ENSPFOG00000010650	si:ch211-117n7.8	100	77.887	ENSATEG00000010844	si:ch211-117n7.8	100	77.887	Anabas_testudineus
ENSPFOG00000010650	si:ch211-117n7.8	92	55.404	ENSAPLG00000006313	SRBD1	100	53.282	Anas_platyrhynchos
ENSPFOG00000010650	si:ch211-117n7.8	97	51.668	ENSANAG00000025573	SRBD1	98	51.343	Aotus_nancymaae
ENSPFOG00000010650	si:ch211-117n7.8	100	79.512	ENSACLG00000024219	si:ch211-117n7.8	100	79.512	Astatotilapia_calliptera
ENSPFOG00000010650	si:ch211-117n7.8	100	62.369	ENSAMXG00000004294	SRBD1	100	64.654	Astyanax_mexicanus
ENSPFOG00000010650	si:ch211-117n7.8	83	57.244	ENSBTAG00000007508	SRBD1	97	49.850	Bos_taurus
ENSPFOG00000010650	si:ch211-117n7.8	83	57.075	ENSCJAG00000000727	SRBD1	98	50.797	Callithrix_jacchus
ENSPFOG00000010650	si:ch211-117n7.8	93	53.656	ENSCAFG00000002554	SRBD1	96	53.656	Canis_familiaris
ENSPFOG00000010650	si:ch211-117n7.8	93	51.295	ENSCAFG00020026284	SRBD1	99	57.746	Canis_lupus_dingo
ENSPFOG00000010650	si:ch211-117n7.8	83	57.362	ENSCHIG00000016535	SRBD1	97	51.179	Capra_hircus
ENSPFOG00000010650	si:ch211-117n7.8	94	53.681	ENSTSYG00000012797	SRBD1	99	51.681	Carlito_syrichta
ENSPFOG00000010650	si:ch211-117n7.8	97	52.218	ENSCPOG00000004773	SRBD1	98	52.218	Cavia_porcellus
ENSPFOG00000010650	si:ch211-117n7.8	97	51.362	ENSCCAG00000025589	SRBD1	98	51.043	Cebus_capucinus
ENSPFOG00000010650	si:ch211-117n7.8	97	51.972	ENSCATG00000039530	SRBD1	98	51.642	Cercocebus_atys
ENSPFOG00000010650	si:ch211-117n7.8	97	53.043	ENSCLAG00000008623	SRBD1	99	53.043	Chinchilla_lanigera
ENSPFOG00000010650	si:ch211-117n7.8	97	51.818	ENSCSAG00000013350	SRBD1	98	51.491	Chlorocebus_sabaeus
ENSPFOG00000010650	si:ch211-117n7.8	80	79.070	ENSCHOG00000003805	SRBD1	84	79.070	Choloepus_hoffmanni
ENSPFOG00000010650	si:ch211-117n7.8	86	56.900	ENSCPBG00000005677	SRBD1	100	52.626	Chrysemys_picta_bellii
ENSPFOG00000010650	si:ch211-117n7.8	78	40.325	ENSCING00000005950	-	99	40.325	Ciona_intestinalis
ENSPFOG00000010650	si:ch211-117n7.8	78	42.785	ENSCSAVG00000000861	-	99	42.785	Ciona_savignyi
ENSPFOG00000010650	si:ch211-117n7.8	97	51.665	ENSCANG00000016307	SRBD1	98	51.241	Colobus_angolensis_palliatus
ENSPFOG00000010650	si:ch211-117n7.8	99	51.282	ENSCGRG00001000513	Srbd1	99	51.282	Cricetulus_griseus_chok1gshd
ENSPFOG00000010650	si:ch211-117n7.8	99	51.282	ENSCGRG00000002283	Srbd1	99	51.282	Cricetulus_griseus_crigri
ENSPFOG00000010650	si:ch211-117n7.8	100	71.683	ENSCSEG00000000856	si:ch211-117n7.8	100	71.782	Cynoglossus_semilaevis
ENSPFOG00000010650	si:ch211-117n7.8	98	81.633	ENSCVAG00000020212	si:ch211-117n7.8	99	81.633	Cyprinodon_variegatus
ENSPFOG00000010650	si:ch211-117n7.8	93	52.103	ENSDNOG00000018686	SRBD1	96	52.103	Dasypus_novemcinctus
ENSPFOG00000010650	si:ch211-117n7.8	99	50.048	ENSDORG00000010468	Srbd1	96	53.702	Dipodomys_ordii
ENSPFOG00000010650	si:ch211-117n7.8	78	36.352	FBgn0051156	CG31156	79	36.478	Drosophila_melanogaster
ENSPFOG00000010650	si:ch211-117n7.8	73	58.394	ENSETEG00000000739	SRBD1	77	57.847	Echinops_telfairi
ENSPFOG00000010650	si:ch211-117n7.8	72	48.485	ENSEBUG00000008902	si:ch211-117n7.8	95	48.485	Eptatretus_burgeri
ENSPFOG00000010650	si:ch211-117n7.8	93	51.132	ENSEASG00005003132	SRBD1	98	56.274	Equus_asinus_asinus
ENSPFOG00000010650	si:ch211-117n7.8	93	53.292	ENSECAG00000013865	SRBD1	97	52.204	Equus_caballus
ENSPFOG00000010650	si:ch211-117n7.8	100	63.790	ENSELUG00000012592	si:ch211-117n7.8	100	64.857	Esox_lucius
ENSPFOG00000010650	si:ch211-117n7.8	93	53.086	ENSFCAG00000005101	SRBD1	98	51.619	Felis_catus
ENSPFOG00000010650	si:ch211-117n7.8	84	57.751	ENSFALG00000012966	SRBD1	97	53.144	Ficedula_albicollis
ENSPFOG00000010650	si:ch211-117n7.8	93	54.497	ENSFDAG00000016670	SRBD1	96	54.497	Fukomys_damarensis
ENSPFOG00000010650	si:ch211-117n7.8	100	85.294	ENSFHEG00000019480	si:ch211-117n7.8	100	85.294	Fundulus_heteroclitus
ENSPFOG00000010650	si:ch211-117n7.8	50	71.868	ENSGMOG00000018010	-	100	71.868	Gadus_morhua
ENSPFOG00000010650	si:ch211-117n7.8	84	59.212	ENSGALG00000009990	SRBD1	98	54.158	Gallus_gallus
ENSPFOG00000010650	si:ch211-117n7.8	100	94.511	ENSGAFG00000019664	si:ch211-117n7.8	100	94.611	Gambusia_affinis
ENSPFOG00000010650	si:ch211-117n7.8	62	82.399	ENSGACG00000010794	si:ch211-117n7.8	100	82.399	Gasterosteus_aculeatus
ENSPFOG00000010650	si:ch211-117n7.8	83	58.893	ENSGAGG00000006166	SRBD1	99	58.893	Gopherus_agassizii
ENSPFOG00000010650	si:ch211-117n7.8	97	51.818	ENSGGOG00000005910	SRBD1	99	51.818	Gorilla_gorilla
ENSPFOG00000010650	si:ch211-117n7.8	97	67.378	ENSHBUG00000013207	si:ch211-117n7.8	100	67.518	Haplochromis_burtoni
ENSPFOG00000010650	si:ch211-117n7.8	98	52.096	ENSHGLG00000018153	-	98	52.096	Heterocephalus_glaber_female
ENSPFOG00000010650	si:ch211-117n7.8	98	52.096	ENSHGLG00100015183	-	98	52.096	Heterocephalus_glaber_male
ENSPFOG00000010650	si:ch211-117n7.8	100	64.462	ENSIPUG00000009661	srbd1	100	64.694	Ictalurus_punctatus
ENSPFOG00000010650	si:ch211-117n7.8	98	52.542	ENSSTOG00000005898	SRBD1	98	52.542	Ictidomys_tridecemlineatus
ENSPFOG00000010650	si:ch211-117n7.8	98	50.645	ENSJJAG00000022244	Srbd1	98	50.645	Jaculus_jaculus
ENSPFOG00000010650	si:ch211-117n7.8	99	82.242	ENSKMAG00000003473	si:ch211-117n7.8	100	82.242	Kryptolebias_marmoratus
ENSPFOG00000010650	si:ch211-117n7.8	100	77.527	ENSLBEG00000027518	si:ch211-117n7.8	100	77.527	Labrus_bergylta
ENSPFOG00000010650	si:ch211-117n7.8	83	58.422	ENSLACG00000009790	SRBD1	98	58.422	Latimeria_chalumnae
ENSPFOG00000010650	si:ch211-117n7.8	92	64.233	ENSLOCG00000016360	si:ch211-117n7.8	99	61.811	Lepisosteus_oculatus
ENSPFOG00000010650	si:ch211-117n7.8	97	51.717	ENSMFAG00000042026	SRBD1	98	51.392	Macaca_fascicularis
ENSPFOG00000010650	si:ch211-117n7.8	83	57.075	ENSMMUG00000003490	SRBD1	98	51.292	Macaca_mulatta
ENSPFOG00000010650	si:ch211-117n7.8	97	50.505	ENSMNEG00000034701	SRBD1	98	50.199	Macaca_nemestrina
ENSPFOG00000010650	si:ch211-117n7.8	97	52.170	ENSMLEG00000000745	SRBD1	98	51.837	Mandrillus_leucophaeus
ENSPFOG00000010650	si:ch211-117n7.8	100	75.665	ENSMAMG00000021921	si:ch211-117n7.8	100	77.537	Mastacembelus_armatus
ENSPFOG00000010650	si:ch211-117n7.8	100	79.415	ENSMZEG00005027369	si:ch211-117n7.8	100	79.610	Maylandia_zebra
ENSPFOG00000010650	si:ch211-117n7.8	79	56.127	ENSMGAG00000010273	SRBD1	100	56.127	Meleagris_gallopavo
ENSPFOG00000010650	si:ch211-117n7.8	77	56.597	ENSMAUG00000013916	Srbd1	95	56.597	Mesocricetus_auratus
ENSPFOG00000010650	si:ch211-117n7.8	93	53.093	ENSMICG00000007835	SRBD1	99	51.113	Microcebus_murinus
ENSPFOG00000010650	si:ch211-117n7.8	99	50.789	ENSMOCG00000018716	Srbd1	99	50.789	Microtus_ochrogaster
ENSPFOG00000010650	si:ch211-117n7.8	97	75.153	ENSMMOG00000007507	si:ch211-117n7.8	100	75.153	Mola_mola
ENSPFOG00000010650	si:ch211-117n7.8	100	76.569	ENSMALG00000001562	si:ch211-117n7.8	100	76.667	Monopterus_albus
ENSPFOG00000010650	si:ch211-117n7.8	83	57.109	MGP_CAROLIEiJ_G0021934	Srbd1	99	58.306	Mus_caroli
ENSPFOG00000010650	si:ch211-117n7.8	83	57.109	ENSMUSG00000024135	Srbd1	99	55.556	Mus_musculus
ENSPFOG00000010650	si:ch211-117n7.8	85	56.431	MGP_PahariEiJ_G0020924	Srbd1	86	56.431	Mus_pahari
ENSPFOG00000010650	si:ch211-117n7.8	83	57.109	MGP_SPRETEiJ_G0022850	Srbd1	84	57.109	Mus_spretus
ENSPFOG00000010650	si:ch211-117n7.8	93	53.402	ENSMLUG00000007039	SRBD1	98	51.566	Myotis_lucifugus
ENSPFOG00000010650	si:ch211-117n7.8	84	55.505	ENSNGAG00000011893	Srbd1	85	55.505	Nannospalax_galili
ENSPFOG00000010650	si:ch211-117n7.8	98	76.559	ENSNBRG00000012873	si:ch211-117n7.8	100	76.761	Neolamprologus_brichardi
ENSPFOG00000010650	si:ch211-117n7.8	83	56.604	ENSNLEG00000016877	SRBD1	98	50.745	Nomascus_leucogenys
ENSPFOG00000010650	si:ch211-117n7.8	94	53.138	ENSODEG00000012095	SRBD1	97	53.138	Octodon_degus
ENSPFOG00000010650	si:ch211-117n7.8	100	79.610	ENSONIG00000000945	si:ch211-117n7.8	100	84.471	Oreochromis_niloticus
ENSPFOG00000010650	si:ch211-117n7.8	93	53.320	ENSOCUG00000015385	SRBD1	95	53.631	Oryctolagus_cuniculus
ENSPFOG00000010650	si:ch211-117n7.8	100	73.092	ENSORLG00000004427	si:ch211-117n7.8	100	73.092	Oryzias_latipes
ENSPFOG00000010650	si:ch211-117n7.8	100	76.637	ENSORLG00020012792	si:ch211-117n7.8	100	76.637	Oryzias_latipes_hni
ENSPFOG00000010650	si:ch211-117n7.8	100	76.223	ENSORLG00015018598	si:ch211-117n7.8	100	76.223	Oryzias_latipes_hsok
ENSPFOG00000010650	si:ch211-117n7.8	99	75.593	ENSOMEG00000012229	si:ch211-117n7.8	99	79.545	Oryzias_melastigma
ENSPFOG00000010650	si:ch211-117n7.8	83	55.595	ENSOGAG00000001076	SRBD1	84	55.595	Otolemur_garnettii
ENSPFOG00000010650	si:ch211-117n7.8	83	53.394	ENSOARG00000005958	SRBD1	98	48.053	Ovis_aries
ENSPFOG00000010650	si:ch211-117n7.8	83	56.389	ENSPPAG00000038442	SRBD1	98	51.142	Pan_paniscus
ENSPFOG00000010650	si:ch211-117n7.8	93	53.679	ENSPPRG00000003449	SRBD1	98	52.012	Panthera_pardus
ENSPFOG00000010650	si:ch211-117n7.8	93	53.216	ENSPTIG00000012495	SRBD1	98	51.572	Panthera_tigris_altaica
ENSPFOG00000010650	si:ch211-117n7.8	83	56.389	ENSPTRG00000011889	SRBD1	98	51.142	Pan_troglodytes
ENSPFOG00000010650	si:ch211-117n7.8	97	51.256	ENSPANG00000008063	SRBD1	98	50.940	Papio_anubis
ENSPFOG00000010650	si:ch211-117n7.8	94	64.196	ENSPKIG00000021973	si:ch211-117n7.8	99	61.696	Paramormyrops_kingsleyae
ENSPFOG00000010650	si:ch211-117n7.8	84	57.706	ENSPSIG00000008992	SRBD1	100	51.610	Pelodiscus_sinensis
ENSPFOG00000010650	si:ch211-117n7.8	85	79.064	ENSPMGG00000013348	si:ch211-117n7.8	99	72.773	Periophthalmus_magnuspinnatus
ENSPFOG00000010650	si:ch211-117n7.8	98	50.390	ENSPEMG00000020684	Srbd1	99	50.390	Peromyscus_maniculatus_bairdii
ENSPFOG00000010650	si:ch211-117n7.8	100	99.202	ENSPLAG00000002141	si:ch211-117n7.8	100	99.202	Poecilia_latipinna
ENSPFOG00000010650	si:ch211-117n7.8	100	99.800	ENSPMEG00000018537	si:ch211-117n7.8	100	99.800	Poecilia_mexicana
ENSPFOG00000010650	si:ch211-117n7.8	100	92.850	ENSPREG00000003258	si:ch211-117n7.8	100	92.850	Poecilia_reticulata
ENSPFOG00000010650	si:ch211-117n7.8	88	51.146	ENSPPYG00000012444	SRBD1	97	48.082	Pongo_abelii
ENSPFOG00000010650	si:ch211-117n7.8	75	52.632	ENSPCAG00000005629	SRBD1	80	52.632	Procavia_capensis
ENSPFOG00000010650	si:ch211-117n7.8	83	48.592	ENSPCOG00000017669	SRBD1	99	43.482	Propithecus_coquereli
ENSPFOG00000010650	si:ch211-117n7.8	83	50.766	ENSPVAG00000001782	SRBD1	98	45.941	Pteropus_vampyrus
ENSPFOG00000010650	si:ch211-117n7.8	97	74.847	ENSPNYG00000000508	si:ch211-117n7.8	100	75.051	Pundamilia_nyererei
ENSPFOG00000010650	si:ch211-117n7.8	96	67.318	ENSPNAG00000013492	SRBD1	97	67.039	Pygocentrus_nattereri
ENSPFOG00000010650	si:ch211-117n7.8	84	55.621	ENSRNOG00000014720	Srbd1	99	50.794	Rattus_norvegicus
ENSPFOG00000010650	si:ch211-117n7.8	97	51.668	ENSRBIG00000033486	SRBD1	98	51.244	Rhinopithecus_bieti
ENSPFOG00000010650	si:ch211-117n7.8	97	51.668	ENSRROG00000041599	SRBD1	98	51.244	Rhinopithecus_roxellana
ENSPFOG00000010650	si:ch211-117n7.8	83	56.722	ENSSBOG00000024982	SRBD1	98	51.045	Saimiri_boliviensis_boliviensis
ENSPFOG00000010650	si:ch211-117n7.8	86	67.436	ENSSFOG00015001128	si:ch211-117n7.8	94	67.436	Scleropages_formosus
ENSPFOG00000010650	si:ch211-117n7.8	100	76.998	ENSSMAG00000018256	si:ch211-117n7.8	100	76.998	Scophthalmus_maximus
ENSPFOG00000010650	si:ch211-117n7.8	93	80.270	ENSSLDG00000023189	si:ch211-117n7.8	99	78.890	Seriola_lalandi_dorsalis
ENSPFOG00000010650	si:ch211-117n7.8	93	50.470	ENSSARG00000009740	SRBD1	96	50.470	Sorex_araneus
ENSPFOG00000010650	si:ch211-117n7.8	85	59.181	ENSSPUG00000010475	SRBD1	94	59.181	Sphenodon_punctatus
ENSPFOG00000010650	si:ch211-117n7.8	97	76.115	ENSSPAG00000008092	-	99	76.115	Stegastes_partitus
ENSPFOG00000010650	si:ch211-117n7.8	93	50.262	ENSSSCG00000008445	SRBD1	98	51.170	Sus_scrofa
ENSPFOG00000010650	si:ch211-117n7.8	83	58.373	ENSTGUG00000003878	SRBD1	100	58.373	Taeniopygia_guttata
ENSPFOG00000010650	si:ch211-117n7.8	99	73.854	ENSTRUG00000007080	si:ch211-117n7.8	99	79.260	Takifugu_rubripes
ENSPFOG00000010650	si:ch211-117n7.8	98	72.475	ENSTNIG00000007464	si:ch211-117n7.8	98	72.475	Tetraodon_nigroviridis
ENSPFOG00000010650	si:ch211-117n7.8	64	80.851	ENSTBEG00000004556	SRBD1	69	80.851	Tupaia_belangeri
ENSPFOG00000010650	si:ch211-117n7.8	86	57.292	ENSTTRG00000011871	SRBD1	87	57.292	Tursiops_truncatus
ENSPFOG00000010650	si:ch211-117n7.8	83	57.715	ENSUAMG00000008126	SRBD1	97	55.072	Ursus_americanus
ENSPFOG00000010650	si:ch211-117n7.8	83	57.715	ENSUMAG00000012902	SRBD1	97	52.118	Ursus_maritimus
ENSPFOG00000010650	si:ch211-117n7.8	83	57.075	ENSVPAG00000006825	SRBD1	92	57.075	Vicugna_pacos
ENSPFOG00000010650	si:ch211-117n7.8	93	53.981	ENSVVUG00000005389	SRBD1	96	53.981	Vulpes_vulpes
ENSPFOG00000010650	si:ch211-117n7.8	98	45.793	ENSXETG00000002760	srbd1	99	45.985	Xenopus_tropicalis
ENSPFOG00000010650	si:ch211-117n7.8	100	95.010	ENSXMAG00000016861	si:ch211-117n7.8	100	95.010	Xiphophorus_maculatus