EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPFOG00000010723 (Gene tree)
Gene ID: 103139597
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Poecilia_formosa
Status: putative
Strand: Minus strand
Length: 7145 bases
Position: chrKI519672.1:2530200-2537344
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPFOP00000010705	zf-met	PF12874.7	1.2e-19	1	4
ENSPFOP00000010705	zf-met	PF12874.7	1.2e-19	2	4
ENSPFOP00000010705	zf-met	PF12874.7	1.2e-19	3	4
ENSPFOP00000010705	zf-met	PF12874.7	1.2e-19	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPFOT00000010720	-	3553	-	ENSPFOP00000010705	573 (aa)	-	A0A087XY52

Gene Model

Click here to download ENSPFOG00000010723's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000010723's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPFOG00000010723	-	50	30.435	ENSPFOG00000018088	znf346	72	30.435

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPFOG00000010723	-	95	42.097	ENSACIG00000003672	-	99	46.099	Amphilophus_citrinellus
ENSPFOG00000010723	-	69	36.697	ENSAMXG00000040757	-	99	34.291	Astyanax_mexicanus
ENSPFOG00000010723	-	95	53.380	ENSFHEG00000022774	-	73	54.593	Fundulus_heteroclitus
ENSPFOG00000010723	-	83	83.799	ENSGAFG00000021491	-	87	80.311	Gambusia_affinis
ENSPFOG00000010723	-	97	46.064	ENSKMAG00000018937	-	96	48.013	Kryptolebias_marmoratus
ENSPFOG00000010723	-	85	31.485	ENSLACG00000004486	-	95	32.194	Latimeria_chalumnae
ENSPFOG00000010723	-	57	58.912	ENSMAMG00000018920	-	100	46.191	Mastacembelus_armatus
ENSPFOG00000010723	-	92	43.932	ENSNBRG00000018883	-	99	45.783	Neolamprologus_brichardi
ENSPFOG00000010723	-	58	47.287	ENSONIG00000020374	-	98	45.992	Oreochromis_niloticus
ENSPFOG00000010723	-	67	50.735	ENSORLG00000026368	-	100	43.361	Oryzias_latipes
ENSPFOG00000010723	-	67	50.735	ENSORLG00020000211	-	100	43.529	Oryzias_latipes_hni
ENSPFOG00000010723	-	67	50.000	ENSORLG00015004724	-	100	45.267	Oryzias_latipes_hsok
ENSPFOG00000010723	-	95	45.407	ENSOMEG00000002792	-	100	46.967	Oryzias_melastigma
ENSPFOG00000010723	-	60	44.693	ENSPKIG00000016531	-	99	36.986	Paramormyrops_kingsleyae
ENSPFOG00000010723	-	95	98.901	ENSPLAG00000012038	-	100	98.901	Poecilia_latipinna
ENSPFOG00000010723	-	95	94.425	ENSPMEG00000020927	-	100	94.425	Poecilia_mexicana
ENSPFOG00000010723	-	83	87.674	ENSPREG00000020523	-	100	87.475	Poecilia_reticulata
ENSPFOG00000010723	-	87	43.400	ENSPNYG00000003309	-	99	44.304	Pundamilia_nyererei
ENSPFOG00000010723	-	63	51.491	ENSSLDG00000017802	-	100	45.546	Seriola_lalandi_dorsalis
ENSPFOG00000010723	-	95	86.847	ENSXMAG00000002135	-	100	87.207	Xiphophorus_maculatus