EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSPFOG00000010815 (Gene tree)
Gene ID
103136982
Gene Symbol
pabpc1a
Alias
-
Full Name
poly(A) binding protein%2C cytoplasmic 1a
Gene Type
protein_coding
Species
Poecilia_formosa
Status
putative
Strand
Plus strand
Length
7234 bases
Position
chrKI519646.1:2114803-2122036
Accession
ZDB-GENE-030131-3238
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPFOP00000010987PABPPF00658.186.2e-3211
ENSPFOP00000010987RRM_5PF13893.63.5e-0812
ENSPFOP00000010987RRM_5PF13893.63.5e-0822
ENSPFOP00000010987RRM_1PF00076.224.4e-9314
ENSPFOP00000010987RRM_1PF00076.224.4e-9324
ENSPFOP00000010987RRM_1PF00076.224.4e-9334
ENSPFOP00000010987RRM_1PF00076.224.4e-9344
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPFOT00000011003-3165-ENSPFOP00000010987647 (aa)-A0A087XYY4
Gene Model
Click here to download ENSPFOG00000010815's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000010815's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSPFOG00000010815pabpc1a5737.349ENSPFOG00000007754elavl37937.349
ENSPFOG00000010815pabpc1a5832.632ENSPFOG00000002923rbms2b5332.632
ENSPFOG00000010815pabpc1a5736.145ENSPFOG00000004811elavl410031.944
ENSPFOG00000010815pabpc1a5730.389ENSPFOG00000009767tial17330.389
ENSPFOG00000010815pabpc1a9969.375ENSPFOG00000013241pabpc1l9969.375
ENSPFOG00000010815pabpc1a10088.290ENSPFOG00000005917pabpc1b10088.462
ENSPFOG00000010815pabpc1a9875.312ENSPFOG00000002682pabpc49875.975
ENSPFOG00000010815pabpc1a5737.349ENSPFOG00000003436ELAVL27937.349
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPFOG00000010815pabpc1a5780.102ENSG00000186288PABPC1L2A9880.102Homo_sapiens
ENSPFOG00000010815pabpc1a5780.102ENSG00000184388PABPC1L2B9880.102Homo_sapiens
ENSPFOG00000010815pabpc1a10089.231ENSAPOG00000017776pabpc1b10088.923Acanthochromis_polyacanthus
ENSPFOG00000010815pabpc1a10096.600ENSAPOG00000015105pabpc1a10096.600Acanthochromis_polyacanthus
ENSPFOG00000010815pabpc1a5780.102ENSAMEG00000019441-9880.102Ailuropoda_melanoleuca
ENSPFOG00000010815pabpc1a10096.445ENSACIG00000004685pabpc1a10096.445Amphilophus_citrinellus
ENSPFOG00000010815pabpc1a10085.253ENSACIG00000018366pabpc1b10085.100Amphilophus_citrinellus
ENSPFOG00000010815pabpc1a10089.077ENSAOCG00000019839pabpc1b10088.769Amphiprion_ocellaris
ENSPFOG00000010815pabpc1a10097.063ENSAOCG00000011656pabpc1a10097.063Amphiprion_ocellaris
ENSPFOG00000010815pabpc1a10089.077ENSAPEG00000010435pabpc1b10088.769Amphiprion_percula
ENSPFOG00000010815pabpc1a10097.063ENSAPEG00000006963pabpc1a10097.063Amphiprion_percula
ENSPFOG00000010815pabpc1a10096.445ENSATEG00000024852pabpc1a10096.445Anabas_testudineus
ENSPFOG00000010815pabpc1a10088.018ENSATEG00000012917pabpc1b10088.018Anabas_testudineus
ENSPFOG00000010815pabpc1a5780.102ENSANAG00000019429-9880.102Aotus_nancymaae
ENSPFOG00000010815pabpc1a5780.102ENSANAG00000019431-9880.102Aotus_nancymaae
ENSPFOG00000010815pabpc1a10096.136ENSACLG00000009399pabpc1a10096.136Astatotilapia_calliptera
ENSPFOG00000010815pabpc1a10087.846ENSACLG00000014335pabpc1b10087.692Astatotilapia_calliptera
ENSPFOG00000010815pabpc1a10089.077ENSAMXG00000008599pabpc1b10088.923Astyanax_mexicanus
ENSPFOG00000010815pabpc1a5879.024ENSBTAG00000050902-9879.024Bos_taurus
ENSPFOG00000010815pabpc1a5877.033ENSBTAG00000052491-9877.033Bos_taurus
ENSPFOG00000010815pabpc1a5780.102ENSCJAG00000041326-9880.102Callithrix_jacchus
ENSPFOG00000010815pabpc1a5879.024ENSCAFG00020002052-9879.024Canis_lupus_dingo
ENSPFOG00000010815pabpc1a5780.102ENSCHIG00000006283-9880.102Capra_hircus
ENSPFOG00000010815pabpc1a5780.102ENSCHIG00000011138-9880.102Capra_hircus
ENSPFOG00000010815pabpc1a5780.102ENSTSYG00000001775-9880.102Carlito_syrichta
ENSPFOG00000010815pabpc1a5780.102ENSCPOG00000009525-9880.102Cavia_porcellus
ENSPFOG00000010815pabpc1a5780.102ENSCCAG00000031524-9880.102Cebus_capucinus
ENSPFOG00000010815pabpc1a5780.102ENSCATG00000043125-9880.102Cercocebus_atys
ENSPFOG00000010815pabpc1a5780.102ENSCATG00000042826-9880.102Cercocebus_atys
ENSPFOG00000010815pabpc1a5778.061ENSCLAG00000017412-9878.061Chinchilla_lanigera
ENSPFOG00000010815pabpc1a5778.061ENSCLAG00000017409-9878.061Chinchilla_lanigera
ENSPFOG00000010815pabpc1a5780.102ENSCSAG00000000102-9880.102Chlorocebus_sabaeus
ENSPFOG00000010815pabpc1a5680.110ENSCGRG00001023387-9677.436Cricetulus_griseus_chok1gshd
ENSPFOG00000010815pabpc1a10087.385ENSCSEG00000015241-10087.385Cynoglossus_semilaevis
ENSPFOG00000010815pabpc1a9995.963ENSCSEG00000013324pabpc1a10095.963Cynoglossus_semilaevis
ENSPFOG00000010815pabpc1a10096.754ENSCVAG00000021872pabpc1a10096.754Cyprinodon_variegatus
ENSPFOG00000010815pabpc1a10086.636ENSCVAG00000005489pabpc1b10086.482Cyprinodon_variegatus
ENSPFOG00000010815pabpc1a10088.000ENSDARG00000021140pabpc1b9992.199Danio_rerio
ENSPFOG00000010815pabpc1a10090.000ENSDARG00000017219pabpc1a10090.000Danio_rerio
ENSPFOG00000010815pabpc1a5780.423ENSDNOG00000030926-9878.571Dasypus_novemcinctus
ENSPFOG00000010815pabpc1a5777.551ENSDORG00000011362-9877.551Dipodomys_ordii
ENSPFOG00000010815pabpc1a5878.641ENSEASG00005010399-9878.641Equus_asinus_asinus
ENSPFOG00000010815pabpc1a5878.641ENSECAG00000002620-9878.641Equus_caballus
ENSPFOG00000010815pabpc1a5876.020ENSEEUG00000008203-9876.020Erinaceus_europaeus
ENSPFOG00000010815pabpc1a10087.423ENSELUG00000015062-10087.117Esox_lucius
ENSPFOG00000010815pabpc1a9992.438ENSELUG00000003614pabpc1a10092.438Esox_lucius
ENSPFOG00000010815pabpc1a5858.621ENSELUG00000005389-9758.621Esox_lucius
ENSPFOG00000010815pabpc1a5780.102ENSFCAG00000039701-9880.102Felis_catus
ENSPFOG00000010815pabpc1a5780.102ENSFDAG00000005484-9880.102Fukomys_damarensis
ENSPFOG00000010815pabpc1a10087.982ENSFHEG00000008186pabpc1b10088.154Fundulus_heteroclitus
ENSPFOG00000010815pabpc1a10096.754ENSFHEG00000018979pabpc1a10096.754Fundulus_heteroclitus
ENSPFOG00000010815pabpc1a10080.586ENSGMOG00000002448-10079.969Gadus_morhua
ENSPFOG00000010815pabpc1a9994.281ENSGMOG00000013448pabpc1a9993.972Gadus_morhua
ENSPFOG00000010815pabpc1a10088.752ENSGAFG00000010193pabpc1b10088.769Gambusia_affinis
ENSPFOG00000010815pabpc1a10096.754ENSGAFG00000019750pabpc1a10096.754Gambusia_affinis
ENSPFOG00000010815pabpc1a10096.605ENSGACG00000003572pabpc1a10096.605Gasterosteus_aculeatus
ENSPFOG00000010815pabpc1a10087.982ENSGACG00000003771pabpc1b10087.982Gasterosteus_aculeatus
ENSPFOG00000010815pabpc1a5780.102ENSGGOG00000043933-9880.102Gorilla_gorilla
ENSPFOG00000010815pabpc1a5780.102ENSGGOG00000038606-9880.102Gorilla_gorilla
ENSPFOG00000010815pabpc1a10087.846ENSHBUG00000002075pabpc1b10087.692Haplochromis_burtoni
ENSPFOG00000010815pabpc1a10096.136ENSHBUG00000020487pabpc1a10096.136Haplochromis_burtoni
ENSPFOG00000010815pabpc1a5779.082ENSHGLG00000019762-9879.082Heterocephalus_glaber_female
ENSPFOG00000010815pabpc1a5779.082ENSHGLG00000019668-9879.082Heterocephalus_glaber_female
ENSPFOG00000010815pabpc1a5779.082ENSHGLG00100020854-9879.082Heterocephalus_glaber_male
ENSPFOG00000010815pabpc1a8581.720ENSHCOG00000003175pabpc1b9981.720Hippocampus_comes
ENSPFOG00000010815pabpc1a10095.981ENSHCOG00000013502pabpc1a10095.981Hippocampus_comes
ENSPFOG00000010815pabpc1a7355.925ENSIPUG00000021244-6355.983Ictalurus_punctatus
ENSPFOG00000010815pabpc1a10083.513ENSIPUG00000010791-10083.513Ictalurus_punctatus
ENSPFOG00000010815pabpc1a7258.209ENSIPUG00000018724-7558.209Ictalurus_punctatus
ENSPFOG00000010815pabpc1a10088.717ENSIPUG00000008848pabpc1a10088.563Ictalurus_punctatus
ENSPFOG00000010815pabpc1a5779.592ENSSTOG00000022096-9879.592Ictidomys_tridecemlineatus
ENSPFOG00000010815pabpc1a5779.592ENSSTOG00000026028-9879.592Ictidomys_tridecemlineatus
ENSPFOG00000010815pabpc1a5778.571ENSJJAG00000007037-9878.571Jaculus_jaculus
ENSPFOG00000010815pabpc1a10087.191ENSKMAG00000008049pabpc1b10087.346Kryptolebias_marmoratus
ENSPFOG00000010815pabpc1a10096.754ENSKMAG00000000605pabpc1a10096.754Kryptolebias_marmoratus
ENSPFOG00000010815pabpc1a10087.692ENSLBEG00000026845pabpc1b10087.385Labrus_bergylta
ENSPFOG00000010815pabpc1a10095.672ENSLBEG00000024002-10095.672Labrus_bergylta
ENSPFOG00000010815pabpc1a5778.974ENSLAFG00000023096-9878.974Loxodonta_africana
ENSPFOG00000010815pabpc1a5779.695ENSMFAG00000028878-9879.695Macaca_fascicularis
ENSPFOG00000010815pabpc1a5780.102ENSMMUG00000037681-9880.102Macaca_mulatta
ENSPFOG00000010815pabpc1a5780.102ENSMMUG00000039929-9880.102Macaca_mulatta
ENSPFOG00000010815pabpc1a5780.102ENSMMUG00000009740-9880.102Macaca_mulatta
ENSPFOG00000010815pabpc1a5780.102ENSMNEG00000037732-9880.102Macaca_nemestrina
ENSPFOG00000010815pabpc1a5780.102ENSMLEG00000027495-9880.102Mandrillus_leucophaeus
ENSPFOG00000010815pabpc1a10096.291ENSMAMG00000004502-10096.291Mastacembelus_armatus
ENSPFOG00000010815pabpc1a10088.154ENSMAMG00000014610pabpc1b10088.308Mastacembelus_armatus
ENSPFOG00000010815pabpc1a10087.846ENSMZEG00005026745pabpc1b10087.692Maylandia_zebra
ENSPFOG00000010815pabpc1a10096.136ENSMZEG00005025416pabpc1a10096.136Maylandia_zebra
ENSPFOG00000010815pabpc1a5780.102ENSMICG00000047642-9880.102Microcebus_murinus
ENSPFOG00000010815pabpc1a10094.172ENSMMOG00000018044pabpc1a10095.370Mola_mola
ENSPFOG00000010815pabpc1a10082.897ENSMMOG00000018009pabpc1b10081.356Mola_mola
ENSPFOG00000010815pabpc1a9965.586ENSMODG00000015024-9965.070Monodelphis_domestica
ENSPFOG00000010815pabpc1a9872.414ENSMODG00000013156-9872.414Monodelphis_domestica
ENSPFOG00000010815pabpc1a10095.981ENSMALG00000013020-10095.981Monopterus_albus
ENSPFOG00000010815pabpc1a10082.280ENSMALG00000006066pabpc1b10091.770Monopterus_albus
ENSPFOG00000010815pabpc1a5781.967ENSNGAG00000012688-9878.571Nannospalax_galili
ENSPFOG00000010815pabpc1a10087.846ENSNBRG00000013737pabpc1b10087.692Neolamprologus_brichardi
ENSPFOG00000010815pabpc1a10095.981ENSNBRG00000003068-10096.101Neolamprologus_brichardi
ENSPFOG00000010815pabpc1a5780.102ENSNLEG00000018128-9880.102Nomascus_leucogenys
ENSPFOG00000010815pabpc1a5779.592ENSODEG00000018540-9879.592Octodon_degus
ENSPFOG00000010815pabpc1a10095.363ENSONIG00000006871-10095.363Oreochromis_niloticus
ENSPFOG00000010815pabpc1a10087.692ENSONIG00000002717pabpc1b10087.538Oreochromis_niloticus
ENSPFOG00000010815pabpc1a5780.102ENSOCUG00000002565-9880.102Oryctolagus_cuniculus
ENSPFOG00000010815pabpc1a10095.054ENSORLG00000002691pabpc1a96100.000Oryzias_latipes
ENSPFOG00000010815pabpc1a10083.359ENSORLG00000003008-10083.051Oryzias_latipes
ENSPFOG00000010815pabpc1a10095.209ENSORLG00020022398pabpc1a10095.209Oryzias_latipes_hni
ENSPFOG00000010815pabpc1a10083.359ENSORLG00020022259-10083.051Oryzias_latipes_hni
ENSPFOG00000010815pabpc1a10083.667ENSORLG00015010932-10083.359Oryzias_latipes_hsok
ENSPFOG00000010815pabpc1a10095.054ENSORLG00015013633pabpc110095.054Oryzias_latipes_hsok
ENSPFOG00000010815pabpc1a10095.981ENSOMEG00000020219pabpc1a10095.981Oryzias_melastigma
ENSPFOG00000010815pabpc1a9381.465ENSOMEG00000013627pabpc1b10081.465Oryzias_melastigma
ENSPFOG00000010815pabpc1a5780.102ENSOGAG00000026047-9880.102Otolemur_garnettii
ENSPFOG00000010815pabpc1a5780.102ENSOGAG00000029513-9880.102Otolemur_garnettii
ENSPFOG00000010815pabpc1a5780.102ENSOARG00000005943-9880.102Ovis_aries
ENSPFOG00000010815pabpc1a5780.102ENSPPAG00000012920-9880.102Pan_paniscus
ENSPFOG00000010815pabpc1a5780.102ENSPPRG00000011809-9880.102Panthera_pardus
ENSPFOG00000010815pabpc1a5780.102ENSPPRG00000011804-9880.102Panthera_pardus
ENSPFOG00000010815pabpc1a5780.102ENSPTRG00000028252-9880.102Pan_troglodytes
ENSPFOG00000010815pabpc1a5780.102ENSPANG00000011549-9880.102Papio_anubis
ENSPFOG00000010815pabpc1a10088.769ENSPKIG00000005676pabpc1b10088.769Paramormyrops_kingsleyae
ENSPFOG00000010815pabpc1a6991.928ENSPMGG00000023134-9791.928Periophthalmus_magnuspinnatus
ENSPFOG00000010815pabpc1a6998.202ENSPMGG00000022487pabpc1a9298.202Periophthalmus_magnuspinnatus
ENSPFOG00000010815pabpc1a9971.094ENSPCIG00000016995-5570.892Phascolarctos_cinereus
ENSPFOG00000010815pabpc1a10088.598ENSPLAG00000001388pabpc1b10088.769Poecilia_latipinna
ENSPFOG00000010815pabpc1a10097.991ENSPLAG00000004114pabpc1a10097.991Poecilia_latipinna
ENSPFOG00000010815pabpc1a10088.290ENSPMEG00000014399pabpc1b10088.462Poecilia_mexicana
ENSPFOG00000010815pabpc1a10097.991ENSPMEG00000001334pabpc1a10097.991Poecilia_mexicana
ENSPFOG00000010815pabpc1a9996.560ENSPREG00000019595pabpc1a10096.560Poecilia_reticulata
ENSPFOG00000010815pabpc1a10088.598ENSPREG00000010911pabpc1b10088.769Poecilia_reticulata
ENSPFOG00000010815pabpc1a5780.102ENSPPYG00000020468-9880.102Pongo_abelii
ENSPFOG00000010815pabpc1a5880.102ENSPCAG00000005308-9880.102Procavia_capensis
ENSPFOG00000010815pabpc1a5779.592ENSPCOG00000026349-9879.592Propithecus_coquereli
ENSPFOG00000010815pabpc1a5880.513ENSPVAG00000016117-9880.513Pteropus_vampyrus
ENSPFOG00000010815pabpc1a10096.136ENSPNYG00000005192pabpc1a10096.136Pundamilia_nyererei
ENSPFOG00000010815pabpc1a10087.846ENSPNYG00000012578pabpc1b10087.692Pundamilia_nyererei
ENSPFOG00000010815pabpc1a10088.462ENSPNAG00000024626pabpc1b10088.308Pygocentrus_nattereri
ENSPFOG00000010815pabpc1a10089.368ENSPNAG00000028408pabpc1a9595.281Pygocentrus_nattereri
ENSPFOG00000010815pabpc1a5780.102ENSRBIG00000027173-9880.102Rhinopithecus_bieti
ENSPFOG00000010815pabpc1a8989.671ENSRBIG00000028738-9589.671Rhinopithecus_bieti
ENSPFOG00000010815pabpc1a5780.102ENSRROG00000017404-9880.102Rhinopithecus_roxellana
ENSPFOG00000010815pabpc1a9862.893ENSSHAG00000000511-10062.835Sarcophilus_harrisii
ENSPFOG00000010815pabpc1a6778.613ENSSFOG00015019668-8878.613Scleropages_formosus
ENSPFOG00000010815pabpc1a10088.290ENSSFOG00015006662pabpc1a10088.290Scleropages_formosus
ENSPFOG00000010815pabpc1a10088.906ENSSFOG00015002752-10088.598Scleropages_formosus
ENSPFOG00000010815pabpc1a10095.981ENSSMAG00000010803pabpc1a10095.981Scophthalmus_maximus
ENSPFOG00000010815pabpc1a10087.385ENSSMAG00000006869pabpc1b10087.231Scophthalmus_maximus
ENSPFOG00000010815pabpc1a10096.136ENSSDUG00000006675pabpc1a10096.136Seriola_dumerili
ENSPFOG00000010815pabpc1a10086.769ENSSDUG00000011965pabpc1b10086.615Seriola_dumerili
ENSPFOG00000010815pabpc1a10096.136ENSSLDG00000011661pabpc1a10096.136Seriola_lalandi_dorsalis
ENSPFOG00000010815pabpc1a10088.397ENSSLDG00000014156pabpc1b10088.244Seriola_lalandi_dorsalis
ENSPFOG00000010815pabpc1a10088.923ENSSPAG00000019265pabpc1b10088.769Stegastes_partitus
ENSPFOG00000010815pabpc1a10096.754ENSSPAG00000014453-10096.754Stegastes_partitus
ENSPFOG00000010815pabpc1a5780.102ENSSSCG00000036336-9880.102Sus_scrofa
ENSPFOG00000010815pabpc1a5780.102ENSSSCG00000032167-9880.102Sus_scrofa
ENSPFOG00000010815pabpc1a10084.793ENSTRUG00000003767-10084.793Takifugu_rubripes
ENSPFOG00000010815pabpc1a10093.364ENSTRUG00000011577-10093.827Takifugu_rubripes
ENSPFOG00000010815pabpc1a10092.049ENSTNIG00000013307pabpc1a10092.508Tetraodon_nigroviridis
ENSPFOG00000010815pabpc1a10085.868ENSTNIG00000009153pabpc1b10085.253Tetraodon_nigroviridis
ENSPFOG00000010815pabpc1a5780.102ENSTTRG00000013181-9880.102Tursiops_truncatus
ENSPFOG00000010815pabpc1a5780.102ENSUAMG00000008089-9880.102Ursus_americanus
ENSPFOG00000010815pabpc1a9753.481ENSUMAG00000023926-8969.890Ursus_maritimus
ENSPFOG00000010815pabpc1a5780.102ENSUMAG00000003364-9880.102Ursus_maritimus
ENSPFOG00000010815pabpc1a5779.000ENSVVUG00000015892-9779.000Vulpes_vulpes
ENSPFOG00000010815pabpc1a9745.125ENSXETG00000015439-9744.619Xenopus_tropicalis
ENSPFOG00000010815pabpc1a10091.190ENSXCOG00000017066pabpc1a10091.190Xiphophorus_couchianus
ENSPFOG00000010815pabpc1a10084.308ENSXCOG00000019901pabpc1b10084.462Xiphophorus_couchianus
ENSPFOG00000010815pabpc1a10097.063ENSXMAG00000002555pabpc1a10097.063Xiphophorus_maculatus
ENSPFOG00000010815pabpc1a10088.752ENSXMAG00000003753pabpc1b10088.769Xiphophorus_maculatus

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