EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPFOG00000010988 (Gene tree)
Gene ID: 103137247
Gene Symbol: -
Alias: -
Full Name: SWT1%2C RNA endoribonuclease homolog
Gene Type: protein_coding
Species: Poecilia_formosa
Status: putative
Strand: Plus strand
Length: 24466 bases
Position: chrKI519648.1:2504419-2528884
Accession: 103137247
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPFOP00000010976	PIN_4	PF13638.6	3.9e-29	1	1
ENSPFOP00000023145	PIN_4	PF13638.6	1.7e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPFOT00000010992	-	4580	XM_007550905	ENSPFOP00000010976	965 (aa)	XP_007550967	A0A087XYX3
ENSPFOT00000028068	-	4235	-	ENSPFOP00000023145	850 (aa)	-	A0A096LVF4

Gene Model

Click here to download ENSPFOG00000010988's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000010988's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPFOG00000010988	-	69	32.060	ENSG00000116668	SWT1	61	31.736	Homo_sapiens
ENSPFOG00000010988	-	97	61.779	ENSAPOG00000014897	-	99	50.604	Acanthochromis_polyacanthus
ENSPFOG00000010988	-	69	33.943	ENSAMEG00000013585	SWT1	72	31.466	Ailuropoda_melanoleuca
ENSPFOG00000010988	-	89	60.784	ENSAOCG00000013932	swt1	100	49.147	Amphiprion_ocellaris
ENSPFOG00000010988	-	94	60.784	ENSAPEG00000009613	-	100	49.500	Amphiprion_percula
ENSPFOG00000010988	-	92	60.601	ENSATEG00000018946	swt1	99	48.795	Anabas_testudineus
ENSPFOG00000010988	-	69	35.714	ENSAPLG00000008607	SWT1	74	36.239	Anas_platyrhynchos
ENSPFOG00000010988	-	68	33.502	ENSACAG00000002276	SWT1	64	33.672	Anolis_carolinensis
ENSPFOG00000010988	-	69	32.500	ENSANAG00000027068	SWT1	59	32.877	Aotus_nancymaae
ENSPFOG00000010988	-	94	50.672	ENSACLG00000009742	swt1	93	63.553	Astatotilapia_calliptera
ENSPFOG00000010988	-	75	41.896	ENSAMXG00000010971	swt1	78	37.306	Astyanax_mexicanus
ENSPFOG00000010988	-	69	32.338	ENSCJAG00000005544	SWT1	59	32.879	Callithrix_jacchus
ENSPFOG00000010988	-	69	33.828	ENSCAFG00000013543	SWT1	61	33.841	Canis_familiaris
ENSPFOG00000010988	-	69	33.993	ENSCAFG00020015648	SWT1	64	33.333	Canis_lupus_dingo
ENSPFOG00000010988	-	69	32.504	ENSCHIG00000023511	SWT1	93	32.242	Capra_hircus
ENSPFOG00000010988	-	75	31.832	ENSTSYG00000010470	SWT1	65	32.024	Carlito_syrichta
ENSPFOG00000010988	-	64	33.449	ENSCPOG00000014251	SWT1	64	33.449	Cavia_porcellus
ENSPFOG00000010988	-	69	32.172	ENSCCAG00000033926	SWT1	59	32.538	Cebus_capucinus
ENSPFOG00000010988	-	72	32.171	ENSCATG00000042210	SWT1	96	32.006	Cercocebus_atys
ENSPFOG00000010988	-	70	33.011	ENSCLAG00000013959	SWT1	63	33.011	Chinchilla_lanigera
ENSPFOG00000010988	-	74	31.125	ENSCSAG00000012895	SWT1	64	31.125	Chlorocebus_sabaeus
ENSPFOG00000010988	-	69	34.483	ENSCPBG00000015691	SWT1	60	34.753	Chrysemys_picta_bellii
ENSPFOG00000010988	-	74	31.211	ENSCANG00000032207	SWT1	96	31.782	Colobus_angolensis_palliatus
ENSPFOG00000010988	-	69	34.167	ENSCGRG00001022955	Swt1	65	34.163	Cricetulus_griseus_chok1gshd
ENSPFOG00000010988	-	69	34.167	ENSCGRG00000010224	Swt1	62	34.163	Cricetulus_griseus_crigri
ENSPFOG00000010988	-	70	57.023	ENSCSEG00000017352	swt1	86	54.867	Cynoglossus_semilaevis
ENSPFOG00000010988	-	69	44.915	ENSDARG00000094010	swt1	56	45.704	Danio_rerio
ENSPFOG00000010988	-	51	31.915	ENSDNOG00000005254	SWT1	58	31.915	Dasypus_novemcinctus
ENSPFOG00000010988	-	70	32.633	ENSDORG00000010531	Swt1	66	33.387	Dipodomys_ordii
ENSPFOG00000010988	-	69	33.554	ENSEASG00005005530	SWT1	63	33.223	Equus_asinus_asinus
ENSPFOG00000010988	-	57	44.944	ENSECAG00000012085	SWT1	58	44.944	Equus_caballus
ENSPFOG00000010988	-	70	47.430	ENSELUG00000020565	swt1	56	49.660	Esox_lucius
ENSPFOG00000010988	-	69	33.055	ENSFCAG00000011286	SWT1	60	33.562	Felis_catus
ENSPFOG00000010988	-	70	33.065	ENSFALG00000003206	SWT1	65	34.073	Ficedula_albicollis
ENSPFOG00000010988	-	69	33.333	ENSFDAG00000007569	SWT1	61	34.354	Fukomys_damarensis
ENSPFOG00000010988	-	58	50.746	ENSGALG00000034230	SWT1	62	35.434	Gallus_gallus
ENSPFOG00000010988	-	100	88.290	ENSGAFG00000007803	-	100	88.290	Gambusia_affinis
ENSPFOG00000010988	-	77	32.792	ENSGAGG00000025050	SWT1	93	35.800	Gopherus_agassizii
ENSPFOG00000010988	-	63	31.949	ENSGGOG00000041167	-	90	32.276	Gorilla_gorilla
ENSPFOG00000010988	-	97	50.822	ENSHBUG00000006188	swt1	93	63.368	Haplochromis_burtoni
ENSPFOG00000010988	-	70	33.981	ENSHGLG00000006542	SWT1	65	33.981	Heterocephalus_glaber_female
ENSPFOG00000010988	-	70	34.304	ENSHGLG00100014408	SWT1	63	34.304	Heterocephalus_glaber_male
ENSPFOG00000010988	-	69	43.074	ENSIPUG00000009113	-	56	44.097	Ictalurus_punctatus
ENSPFOG00000010988	-	69	32.387	ENSSTOG00000010356	SWT1	74	32.051	Ictidomys_tridecemlineatus
ENSPFOG00000010988	-	73	32.859	ENSJJAG00000015927	Swt1	67	32.859	Jaculus_jaculus
ENSPFOG00000010988	-	98	62.063	ENSKMAG00000012533	swt1	99	50.452	Kryptolebias_marmoratus
ENSPFOG00000010988	-	90	58.714	ENSLBEG00000020663	-	99	47.024	Labrus_bergylta
ENSPFOG00000010988	-	70	36.585	ENSLACG00000009194	SWT1	79	36.745	Latimeria_chalumnae
ENSPFOG00000010988	-	68	39.165	ENSLOCG00000001749	swt1	99	40.690	Lepisosteus_oculatus
ENSPFOG00000010988	-	70	32.045	ENSLAFG00000004346	-	95	32.045	Loxodonta_africana
ENSPFOG00000010988	-	69	32.290	ENSMFAG00000031793	SWT1	96	33.003	Macaca_fascicularis
ENSPFOG00000010988	-	68	31.940	ENSMMUG00000013882	SWT1	95	32.721	Macaca_mulatta
ENSPFOG00000010988	-	72	32.013	ENSMNEG00000035502	SWT1	96	33.003	Macaca_nemestrina
ENSPFOG00000010988	-	70	32.114	ENSMLEG00000038692	SWT1	96	32.114	Mandrillus_leucophaeus
ENSPFOG00000010988	-	97	50.704	ENSMZEG00005018489	swt1	93	63.194	Maylandia_zebra
ENSPFOG00000010988	-	69	34.804	ENSMGAG00000000973	SWT1	93	36.425	Meleagris_gallopavo
ENSPFOG00000010988	-	69	32.027	ENSMAUG00000007996	Swt1	59	31.197	Mesocricetus_auratus
ENSPFOG00000010988	-	73	32.543	ENSMICG00000014975	SWT1	62	33.611	Microcebus_murinus
ENSPFOG00000010988	-	69	34.609	ENSMOCG00000009776	Swt1	72	31.897	Microtus_ochrogaster
ENSPFOG00000010988	-	76	30.519	ENSMODG00000007472	SWT1	66	30.519	Monodelphis_domestica
ENSPFOG00000010988	-	98	47.156	ENSMALG00000019308	swt1	99	47.219	Monopterus_albus
ENSPFOG00000010988	-	69	34.775	MGP_CAROLIEiJ_G0014692	Swt1	64	45.625	Mus_caroli
ENSPFOG00000010988	-	69	34.110	ENSMUSG00000052748	Swt1	78	40.000	Mus_musculus
ENSPFOG00000010988	-	69	33.890	MGP_PahariEiJ_G0027928	Swt1	86	39.819	Mus_pahari
ENSPFOG00000010988	-	69	34.609	MGP_SPRETEiJ_G0015499	Swt1	79	41.000	Mus_spretus
ENSPFOG00000010988	-	72	34.062	ENSMPUG00000011913	SWT1	64	34.062	Mustela_putorius_furo
ENSPFOG00000010988	-	69	32.178	ENSMLUG00000001142	SWT1	59	32.653	Myotis_lucifugus
ENSPFOG00000010988	-	69	33.997	ENSNGAG00000021080	Swt1	60	34.412	Nannospalax_galili
ENSPFOG00000010988	-	74	31.115	ENSNLEG00000018031	SWT1	64	31.115	Nomascus_leucogenys
ENSPFOG00000010988	-	98	52.921	ENSONIG00000009994	swt1	94	63.123	Oreochromis_niloticus
ENSPFOG00000010988	-	78	30.145	ENSOANG00000001013	-	80	30.145	Ornithorhynchus_anatinus
ENSPFOG00000010988	-	69	33.388	ENSOCUG00000004901	SWT1	72	32.386	Oryctolagus_cuniculus
ENSPFOG00000010988	-	96	48.201	ENSORLG00000009682	swt1	99	47.752	Oryzias_latipes
ENSPFOG00000010988	-	98	48.032	ENSORLG00020011654	swt1	99	47.856	Oryzias_latipes_hni
ENSPFOG00000010988	-	96	48.407	ENSORLG00015007734	swt1	99	48.060	Oryzias_latipes_hsok
ENSPFOG00000010988	-	92	58.569	ENSOMEG00000006607	swt1	99	48.703	Oryzias_melastigma
ENSPFOG00000010988	-	73	32.428	ENSOGAG00000016195	SWT1	65	32.428	Otolemur_garnettii
ENSPFOG00000010988	-	69	32.338	ENSOARG00000004156	SWT1	59	32.423	Ovis_aries
ENSPFOG00000010988	-	69	32.060	ENSPPAG00000021400	SWT1	61	31.736	Pan_paniscus
ENSPFOG00000010988	-	69	33.833	ENSPPRG00000023754	SWT1	60	33.833	Panthera_pardus
ENSPFOG00000010988	-	69	33.833	ENSPTIG00000021889	SWT1	60	33.833	Panthera_tigris_altaica
ENSPFOG00000010988	-	69	32.060	ENSPTRG00000001777	SWT1	61	31.901	Pan_troglodytes
ENSPFOG00000010988	-	70	31.754	ENSPANG00000005099	SWT1	96	31.754	Papio_anubis
ENSPFOG00000010988	-	70	43.167	ENSPKIG00000005979	swt1	58	45.095	Paramormyrops_kingsleyae
ENSPFOG00000010988	-	69	34.106	ENSPSIG00000008961	SWT1	62	34.036	Pelodiscus_sinensis
ENSPFOG00000010988	-	54	44.253	ENSPMGG00000000152	-	84	39.695	Periophthalmus_magnuspinnatus
ENSPFOG00000010988	-	69	35.108	ENSPEMG00000008208	Swt1	61	34.500	Peromyscus_maniculatus_bairdii
ENSPFOG00000010988	-	71	31.397	ENSPCIG00000002443	SWT1	71	30.404	Phascolarctos_cinereus
ENSPFOG00000010988	-	100	99.482	ENSPLAG00000022908	-	100	99.482	Poecilia_latipinna
ENSPFOG00000010988	-	100	99.173	ENSPMEG00000006943	-	100	99.173	Poecilia_mexicana
ENSPFOG00000010988	-	67	95.363	ENSPREG00000014723	-	92	95.363	Poecilia_reticulata
ENSPFOG00000010988	-	75	31.963	ENSPPYG00000000415	SWT1	65	31.963	Pongo_abelii
ENSPFOG00000010988	-	69	30.846	ENSPVAG00000005968	SWT1	60	31.516	Pteropus_vampyrus
ENSPFOG00000010988	-	97	50.822	ENSPNYG00000012934	swt1	93	63.368	Pundamilia_nyererei
ENSPFOG00000010988	-	69	45.183	ENSPNAG00000017795	swt1	56	47.049	Pygocentrus_nattereri
ENSPFOG00000010988	-	69	33.167	ENSRNOG00000032258	Swt1	72	32.051	Rattus_norvegicus
ENSPFOG00000010988	-	74	30.685	ENSRBIG00000040630	SWT1	95	31.993	Rhinopithecus_bieti
ENSPFOG00000010988	-	72	30.833	ENSSBOG00000028825	SWT1	74	30.833	Saimiri_boliviensis_boliviensis
ENSPFOG00000010988	-	69	33.278	ENSSHAG00000009241	SWT1	60	34.412	Sarcophilus_harrisii
ENSPFOG00000010988	-	75	41.321	ENSSFOG00015004895	swt1	61	41.321	Scleropages_formosus
ENSPFOG00000010988	-	70	58.209	ENSSMAG00000020761	-	57	56.389	Scophthalmus_maximus
ENSPFOG00000010988	-	98	59.132	ENSSDUG00000012345	swt1	99	50.911	Seriola_dumerili
ENSPFOG00000010988	-	98	58.955	ENSSLDG00000003821	swt1	99	50.911	Seriola_lalandi_dorsalis
ENSPFOG00000010988	-	84	31.867	ENSSPUG00000003899	SWT1	74	31.867	Sphenodon_punctatus
ENSPFOG00000010988	-	90	62.625	ENSSPAG00000001030	swt1	99	51.156	Stegastes_partitus
ENSPFOG00000010988	-	70	33.770	ENSSSCG00000015569	SWT1	63	34.262	Sus_scrofa
ENSPFOG00000010988	-	69	33.777	ENSTGUG00000003718	-	97	34.812	Taeniopygia_guttata
ENSPFOG00000010988	-	99	42.887	ENSTRUG00000006420	swt1	99	42.887	Takifugu_rubripes
ENSPFOG00000010988	-	69	32.072	ENSTTRG00000005914	SWT1	60	32.598	Tursiops_truncatus
ENSPFOG00000010988	-	69	33.333	ENSUAMG00000020937	SWT1	78	31.556	Ursus_americanus
ENSPFOG00000010988	-	69	33.611	ENSUMAG00000021918	SWT1	74	31.065	Ursus_maritimus
ENSPFOG00000010988	-	69	33.828	ENSVVUG00000009182	SWT1	62	33.828	Vulpes_vulpes
ENSPFOG00000010988	-	100	90.383	ENSXMAG00000023472	-	100	90.383	Xiphophorus_maculatus