EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPFOG00000011022 (Gene tree)
Gene ID: 103136315
Gene Symbol: gfm1
Alias: -
Full Name: G elongation factor mitochondrial 1
Gene Type: protein_coding
Species: Poecilia_formosa
Status: putative
Strand: Plus strand
Length: 16600 bases
Position: chrKI519641.1:2986241-3002840
Accession: 103136315
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPFOP00000011185	GTP_EFTU	PF00009.27	4.8e-63	1	1
ENSPFOP00000025787	GTP_EFTU	PF00009.27	3.2e-56	1	1
ENSPFOP00000025787	GTP_EFTU_D2	PF03144.25	2.6e-17	1	1
ENSPFOP00000011185	GTP_EFTU_D2	PF03144.25	2.6e-17	1	1
ENSPFOP00000011185	EFG_IV	PF03764.18	4.2e-37	1	1
ENSPFOP00000025787	EFG_IV	PF03764.18	4.2e-37	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPFOT00000011201	-	4112	-	ENSPFOP00000011185	748 (aa)	XP_007549571	A0A087XZI2
ENSPFOT00000023845	-	4115	-	ENSPFOP00000025787	749 (aa)	-	A0A096M2Z6

Gene Model

Click here to download ENSPFOG00000011022's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000011022's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPFOG00000011022	gfm1	76	38.926	ENSPFOG00000012825	eef2b	74	38.926
ENSPFOG00000011022	gfm1	73	38.926	ENSPFOG00000003083	-	72	38.926
ENSPFOG00000011022	gfm1	92	34.286	ENSPFOG00000012381	gfm2	92	34.741
ENSPFOG00000011022	gfm1	53	34.759	ENSPFOG00000006450	guf1	60	34.759

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPFOG00000011022	gfm1	98	81.361	ENSG00000168827	GFM1	100	93.333	Homo_sapiens
ENSPFOG00000011022	gfm1	93	89.112	ENSAPOG00000016489	gfm1	99	89.112	Acanthochromis_polyacanthus
ENSPFOG00000011022	gfm1	96	83.287	ENSAMEG00000013542	GFM1	95	83.287	Ailuropoda_melanoleuca
ENSPFOG00000011022	gfm1	97	86.759	ENSACIG00000014465	gfm1	94	86.759	Amphilophus_citrinellus
ENSPFOG00000011022	gfm1	100	89.706	ENSAOCG00000006023	gfm1	100	89.706	Amphiprion_ocellaris
ENSPFOG00000011022	gfm1	100	89.572	ENSAPEG00000024499	gfm1	100	89.572	Amphiprion_percula
ENSPFOG00000011022	gfm1	100	90.642	ENSATEG00000013789	gfm1	100	90.642	Anabas_testudineus
ENSPFOG00000011022	gfm1	97	80.276	ENSAPLG00000005022	GFM1	100	80.276	Anas_platyrhynchos
ENSPFOG00000011022	gfm1	97	81.103	ENSACAG00000006829	GFM1	98	81.103	Anolis_carolinensis
ENSPFOG00000011022	gfm1	100	79.893	ENSANAG00000035983	GFM1	100	79.893	Aotus_nancymaae
ENSPFOG00000011022	gfm1	100	91.444	ENSACLG00000016586	gfm1	100	91.444	Astatotilapia_calliptera
ENSPFOG00000011022	gfm1	100	86.898	ENSAMXG00000013435	gfm1	98	87.825	Astyanax_mexicanus
ENSPFOG00000011022	gfm1	96	82.591	ENSBTAG00000027795	GFM1	95	82.591	Bos_taurus
ENSPFOG00000011022	gfm1	94	57.775	WBGene00009246	gfm-1	95	57.444	Caenorhabditis_elegans
ENSPFOG00000011022	gfm1	97	82.094	ENSCJAG00000000363	GFM1	97	82.094	Callithrix_jacchus
ENSPFOG00000011022	gfm1	98	81.744	ENSCAFG00000009006	GFM1	100	82.692	Canis_familiaris
ENSPFOG00000011022	gfm1	98	81.633	ENSCAFG00020005878	GFM1	98	83.148	Canis_lupus_dingo
ENSPFOG00000011022	gfm1	96	82.869	ENSCHIG00000015220	GFM1	95	82.869	Capra_hircus
ENSPFOG00000011022	gfm1	100	80.080	ENSTSYG00000002013	GFM1	100	80.080	Carlito_syrichta
ENSPFOG00000011022	gfm1	96	72.790	ENSCAPG00000005699	GFM1	97	72.790	Cavia_aperea
ENSPFOG00000011022	gfm1	100	80.371	ENSCPOG00000001194	GFM1	100	80.371	Cavia_porcellus
ENSPFOG00000011022	gfm1	97	81.818	ENSCCAG00000025561	GFM1	97	81.818	Cebus_capucinus
ENSPFOG00000011022	gfm1	100	79.893	ENSCATG00000037622	GFM1	100	79.893	Cercocebus_atys
ENSPFOG00000011022	gfm1	97	81.956	ENSCLAG00000002503	GFM1	96	81.956	Chinchilla_lanigera
ENSPFOG00000011022	gfm1	100	80.293	ENSCSAG00000012162	GFM1	100	80.293	Chlorocebus_sabaeus
ENSPFOG00000011022	gfm1	100	71.618	ENSCHOG00000004867	GFM1	100	71.618	Choloepus_hoffmanni
ENSPFOG00000011022	gfm1	100	80.641	ENSCPBG00000018367	GFM1	99	80.641	Chrysemys_picta_bellii
ENSPFOG00000011022	gfm1	94	59.161	ENSCING00000011960	-	93	59.161	Ciona_intestinalis
ENSPFOG00000011022	gfm1	95	59.583	ENSCSAVG00000008514	-	99	59.583	Ciona_savignyi
ENSPFOG00000011022	gfm1	98	81.224	ENSCANG00000031714	GFM1	100	80.027	Colobus_angolensis_palliatus
ENSPFOG00000011022	gfm1	100	80.160	ENSCGRG00001022095	GFM1	100	80.160	Cricetulus_griseus_chok1gshd
ENSPFOG00000011022	gfm1	100	80.160	ENSCGRG00000012043	GFM1	100	80.160	Cricetulus_griseus_crigri
ENSPFOG00000011022	gfm1	97	83.956	ENSCSEG00000017088	gfm1	99	83.956	Cynoglossus_semilaevis
ENSPFOG00000011022	gfm1	100	94.652	ENSCVAG00000004126	gfm1	100	94.652	Cyprinodon_variegatus
ENSPFOG00000011022	gfm1	100	84.358	ENSDARG00000063624	gfm1	100	84.358	Danio_rerio
ENSPFOG00000011022	gfm1	55	80.440	ENSDNOG00000016385	-	100	80.440	Dasypus_novemcinctus
ENSPFOG00000011022	gfm1	100	78.439	ENSDORG00000014165	Gfm1	100	78.439	Dipodomys_ordii
ENSPFOG00000011022	gfm1	95	68.970	FBgn0263133	mEFG1	95	68.970	Drosophila_melanogaster
ENSPFOG00000011022	gfm1	96	74.480	ENSETEG00000019197	GFM1	95	74.480	Echinops_telfairi
ENSPFOG00000011022	gfm1	90	63.205	ENSEBUG00000012794	gfm1	99	63.205	Eptatretus_burgeri
ENSPFOG00000011022	gfm1	96	61.111	ENSEEUG00000000429	GFM1	99	61.111	Erinaceus_europaeus
ENSPFOG00000011022	gfm1	100	85.829	ENSELUG00000014728	gfm1	100	85.829	Esox_lucius
ENSPFOG00000011022	gfm1	97	82.231	ENSFCAG00000013291	GFM1	100	80.371	Felis_catus
ENSPFOG00000011022	gfm1	90	80.296	ENSFALG00000007619	GFM1	100	80.296	Ficedula_albicollis
ENSPFOG00000011022	gfm1	100	79.310	ENSFDAG00000016559	GFM1	100	79.310	Fukomys_damarensis
ENSPFOG00000011022	gfm1	100	95.588	ENSFHEG00000006091	gfm1	100	95.588	Fundulus_heteroclitus
ENSPFOG00000011022	gfm1	97	88.033	ENSGMOG00000010161	gfm1	100	88.033	Gadus_morhua
ENSPFOG00000011022	gfm1	97	80.552	ENSGALG00000009634	GFM1	98	80.552	Gallus_gallus
ENSPFOG00000011022	gfm1	100	97.326	ENSGAFG00000012527	gfm1	100	97.326	Gambusia_affinis
ENSPFOG00000011022	gfm1	99	90.642	ENSGACG00000009864	gfm1	99	90.642	Gasterosteus_aculeatus
ENSPFOG00000011022	gfm1	98	81.361	ENSGGOG00000003085	GFM1	100	80.160	Gorilla_gorilla
ENSPFOG00000011022	gfm1	100	91.578	ENSHBUG00000002120	gfm1	100	91.578	Haplochromis_burtoni
ENSPFOG00000011022	gfm1	97	80.992	ENSHGLG00000016855	GFM1	96	80.992	Heterocephalus_glaber_female
ENSPFOG00000011022	gfm1	97	80.992	ENSHGLG00100013049	GFM1	96	80.992	Heterocephalus_glaber_male
ENSPFOG00000011022	gfm1	100	89.572	ENSHCOG00000007638	gfm1	100	89.572	Hippocampus_comes
ENSPFOG00000011022	gfm1	100	87.166	ENSIPUG00000005873	gfm1	100	87.166	Ictalurus_punctatus
ENSPFOG00000011022	gfm1	97	80.303	ENSSTOG00000010150	GFM1	98	80.303	Ictidomys_tridecemlineatus
ENSPFOG00000011022	gfm1	100	79.494	ENSJJAG00000016447	Gfm1	100	79.494	Jaculus_jaculus
ENSPFOG00000011022	gfm1	100	89.171	ENSKMAG00000020768	gfm1	100	89.171	Kryptolebias_marmoratus
ENSPFOG00000011022	gfm1	94	91.441	ENSLBEG00000021315	gfm1	100	91.441	Labrus_bergylta
ENSPFOG00000011022	gfm1	100	82.353	ENSLACG00000012295	GFM1	100	82.353	Latimeria_chalumnae
ENSPFOG00000011022	gfm1	97	80.438	ENSLOCG00000003778	gfm1	100	80.438	Lepisosteus_oculatus
ENSPFOG00000011022	gfm1	99	78.800	ENSLAFG00000010945	GFM1	99	79.583	Loxodonta_africana
ENSPFOG00000011022	gfm1	100	80.027	ENSMFAG00000035731	GFM1	100	80.027	Macaca_fascicularis
ENSPFOG00000011022	gfm1	100	80.027	ENSMMUG00000004961	GFM1	100	80.027	Macaca_mulatta
ENSPFOG00000011022	gfm1	100	79.893	ENSMNEG00000033245	GFM1	100	79.893	Macaca_nemestrina
ENSPFOG00000011022	gfm1	97	80.138	ENSMLEG00000030908	GFM1	99	80.000	Mandrillus_leucophaeus
ENSPFOG00000011022	gfm1	100	90.107	ENSMAMG00000011760	gfm1	100	90.107	Mastacembelus_armatus
ENSPFOG00000011022	gfm1	100	91.578	ENSMZEG00005016639	gfm1	100	91.578	Maylandia_zebra
ENSPFOG00000011022	gfm1	97	80.525	ENSMGAG00000010641	GFM1	97	80.525	Meleagris_gallopavo
ENSPFOG00000011022	gfm1	100	80.293	ENSMAUG00000000611	Gfm1	100	80.293	Mesocricetus_auratus
ENSPFOG00000011022	gfm1	97	82.782	ENSMICG00000049086	GFM1	96	82.782	Microcebus_murinus
ENSPFOG00000011022	gfm1	100	80.559	ENSMOCG00000000465	Gfm1	100	80.559	Microtus_ochrogaster
ENSPFOG00000011022	gfm1	97	90.909	ENSMMOG00000012538	gfm1	98	90.909	Mola_mola
ENSPFOG00000011022	gfm1	99	79.352	ENSMODG00000015673	GFM1	99	79.352	Monodelphis_domestica
ENSPFOG00000011022	gfm1	96	88.145	ENSMALG00000012508	gfm1	95	88.145	Monopterus_albus
ENSPFOG00000011022	gfm1	100	80.426	MGP_CAROLIEiJ_G0025052	Gfm1	100	80.426	Mus_caroli
ENSPFOG00000011022	gfm1	100	80.160	ENSMUSG00000027774	Gfm1	100	80.160	Mus_musculus
ENSPFOG00000011022	gfm1	100	79.760	MGP_PahariEiJ_G0026495	Gfm1	100	79.963	Mus_pahari
ENSPFOG00000011022	gfm1	100	80.160	MGP_SPRETEiJ_G0025994	Gfm1	100	80.160	Mus_spretus
ENSPFOG00000011022	gfm1	97	82.645	ENSMPUG00000002859	GFM1	96	82.645	Mustela_putorius_furo
ENSPFOG00000011022	gfm1	97	82.645	ENSMLUG00000000452	GFM1	96	82.645	Myotis_lucifugus
ENSPFOG00000011022	gfm1	100	79.600	ENSNGAG00000012375	Gfm1	100	79.600	Nannospalax_galili
ENSPFOG00000011022	gfm1	97	91.896	ENSNBRG00000004631	gfm1	99	91.896	Neolamprologus_brichardi
ENSPFOG00000011022	gfm1	97	81.956	ENSNLEG00000004176	GFM1	100	80.160	Nomascus_leucogenys
ENSPFOG00000011022	gfm1	91	72.941	ENSMEUG00000007784	GFM1	99	72.941	Notamacropus_eugenii
ENSPFOG00000011022	gfm1	100	79.973	ENSOPRG00000009860	GFM1	100	79.973	Ochotona_princeps
ENSPFOG00000011022	gfm1	99	81.351	ENSODEG00000004316	GFM1	100	80.239	Octodon_degus
ENSPFOG00000011022	gfm1	100	91.845	ENSONIG00000003772	gfm1	100	91.845	Oreochromis_niloticus
ENSPFOG00000011022	gfm1	98	82.153	ENSOCUG00000013561	GFM1	100	81.034	Oryctolagus_cuniculus
ENSPFOG00000011022	gfm1	95	91.667	ENSORLG00000006487	gfm1	100	91.667	Oryzias_latipes
ENSPFOG00000011022	gfm1	100	91.444	ENSORLG00020003362	gfm1	100	91.444	Oryzias_latipes_hni
ENSPFOG00000011022	gfm1	100	90.775	ENSORLG00015005829	gfm1	100	90.775	Oryzias_latipes_hsok
ENSPFOG00000011022	gfm1	100	91.711	ENSOMEG00000012894	gfm1	100	91.711	Oryzias_melastigma
ENSPFOG00000011022	gfm1	97	81.956	ENSOGAG00000008298	GFM1	96	81.956	Otolemur_garnettii
ENSPFOG00000011022	gfm1	96	81.969	ENSOARG00000002409	GFM1	99	81.969	Ovis_aries
ENSPFOG00000011022	gfm1	98	81.361	ENSPPAG00000033881	GFM1	100	80.160	Pan_paniscus
ENSPFOG00000011022	gfm1	97	82.231	ENSPPRG00000009281	GFM1	100	80.371	Panthera_pardus
ENSPFOG00000011022	gfm1	97	82.094	ENSPTIG00000012416	GFM1	100	80.239	Panthera_tigris_altaica
ENSPFOG00000011022	gfm1	98	81.361	ENSPTRG00000015570	GFM1	100	80.160	Pan_troglodytes
ENSPFOG00000011022	gfm1	100	80.027	ENSPANG00000016512	GFM1	100	80.027	Papio_anubis
ENSPFOG00000011022	gfm1	100	84.091	ENSPKIG00000004876	gfm1	100	84.091	Paramormyrops_kingsleyae
ENSPFOG00000011022	gfm1	100	80.345	ENSPSIG00000012567	GFM1	99	80.345	Pelodiscus_sinensis
ENSPFOG00000011022	gfm1	97	87.586	ENSPMGG00000014068	gfm1	100	87.586	Periophthalmus_magnuspinnatus
ENSPFOG00000011022	gfm1	100	80.293	ENSPEMG00000008942	Gfm1	100	80.293	Peromyscus_maniculatus_bairdii
ENSPFOG00000011022	gfm1	86	78.295	ENSPCIG00000020195	GFM1	98	79.745	Phascolarctos_cinereus
ENSPFOG00000011022	gfm1	98	98.505	ENSPLAG00000019585	gfm1	100	99.017	Poecilia_latipinna
ENSPFOG00000011022	gfm1	100	99.866	ENSPMEG00000012376	gfm1	100	99.866	Poecilia_mexicana
ENSPFOG00000011022	gfm1	100	98.663	ENSPREG00000001332	gfm1	95	98.663	Poecilia_reticulata
ENSPFOG00000011022	gfm1	98	81.088	ENSPPYG00000014244	GFM1	100	79.893	Pongo_abelii
ENSPFOG00000011022	gfm1	94	80.370	ENSPCAG00000008934	GFM1	100	80.370	Procavia_capensis
ENSPFOG00000011022	gfm1	98	81.471	ENSPCOG00000022259	GFM1	100	80.239	Propithecus_coquereli
ENSPFOG00000011022	gfm1	97	81.818	ENSPVAG00000013605	GFM1	96	81.818	Pteropus_vampyrus
ENSPFOG00000011022	gfm1	100	91.310	ENSPNYG00000006037	gfm1	100	91.310	Pundamilia_nyererei
ENSPFOG00000011022	gfm1	100	86.765	ENSPNAG00000001237	gfm1	100	86.765	Pygocentrus_nattereri
ENSPFOG00000011022	gfm1	97	81.793	ENSRNOG00000012873	Gfm1	97	81.793	Rattus_norvegicus
ENSPFOG00000011022	gfm1	98	81.224	ENSRBIG00000031363	GFM1	100	80.027	Rhinopithecus_bieti
ENSPFOG00000011022	gfm1	98	81.361	ENSRROG00000031081	GFM1	100	80.160	Rhinopithecus_roxellana
ENSPFOG00000011022	gfm1	92	57.061	YLR069C	-	90	57.061	Saccharomyces_cerevisiae
ENSPFOG00000011022	gfm1	100	79.893	ENSSBOG00000023252	GFM1	100	79.893	Saimiri_boliviensis_boliviensis
ENSPFOG00000011022	gfm1	97	81.743	ENSSHAG00000017772	GFM1	97	81.517	Sarcophilus_harrisii
ENSPFOG00000011022	gfm1	100	84.379	ENSSFOG00015003117	gfm1	100	84.379	Scleropages_formosus
ENSPFOG00000011022	gfm1	100	89.305	ENSSMAG00000013221	gfm1	100	89.305	Scophthalmus_maximus
ENSPFOG00000011022	gfm1	100	90.642	ENSSDUG00000018665	gfm1	100	90.642	Seriola_dumerili
ENSPFOG00000011022	gfm1	100	90.508	ENSSLDG00000020606	gfm1	100	90.508	Seriola_lalandi_dorsalis
ENSPFOG00000011022	gfm1	99	77.943	ENSSPUG00000018686	GFM1	100	77.943	Sphenodon_punctatus
ENSPFOG00000011022	gfm1	100	92.781	ENSSPAG00000008800	gfm1	100	92.781	Stegastes_partitus
ENSPFOG00000011022	gfm1	96	82.312	ENSSSCG00000025651	GFM1	95	82.312	Sus_scrofa
ENSPFOG00000011022	gfm1	100	88.770	ENSTRUG00000009244	gfm1	100	88.770	Takifugu_rubripes
ENSPFOG00000011022	gfm1	100	90.775	ENSTNIG00000007729	gfm1	100	90.775	Tetraodon_nigroviridis
ENSPFOG00000011022	gfm1	90	73.778	ENSTBEG00000017404	GFM1	89	73.778	Tupaia_belangeri
ENSPFOG00000011022	gfm1	96	82.591	ENSTTRG00000001735	GFM1	95	82.591	Tursiops_truncatus
ENSPFOG00000011022	gfm1	97	82.507	ENSUAMG00000026381	GFM1	100	80.504	Ursus_americanus
ENSPFOG00000011022	gfm1	97	82.507	ENSUMAG00000011268	GFM1	100	80.504	Ursus_maritimus
ENSPFOG00000011022	gfm1	97	78.621	ENSVPAG00000009444	GFM1	96	78.621	Vicugna_pacos
ENSPFOG00000011022	gfm1	98	81.557	ENSVVUG00000020091	GFM1	100	82.396	Vulpes_vulpes
ENSPFOG00000011022	gfm1	100	80.585	ENSXETG00000032551	GFM1	100	80.585	Xenopus_tropicalis
ENSPFOG00000011022	gfm1	54	93.052	ENSXCOG00000012590	gfm1	93	93.052	Xiphophorus_couchianus
ENSPFOG00000011022	gfm1	100	97.727	ENSXMAG00000000261	gfm1	100	97.727	Xiphophorus_maculatus