EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPFOG00000011227 (Gene tree)
Gene ID: 103137447
Gene Symbol: lrpprc
Alias: -
Full Name: leucine rich pentatricopeptide repeat containing
Gene Type: protein_coding
Species: Poecilia_formosa
Status: putative
Strand: Plus strand
Length: 64890 bases
Position: chrKI519650.1:2697986-2762875
Accession: 103137447
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPFOP00000022087	PPR	PF01535.20	2.1e-38	1	6
ENSPFOP00000022087	PPR	PF01535.20	2.1e-38	2	6
ENSPFOP00000022087	PPR	PF01535.20	2.1e-38	3	6
ENSPFOP00000022087	PPR	PF01535.20	2.1e-38	4	6
ENSPFOP00000022087	PPR	PF01535.20	2.1e-38	5	6
ENSPFOP00000022087	PPR	PF01535.20	2.1e-38	6	6
ENSPFOP00000011667	PPR	PF01535.20	2.9e-38	1	6
ENSPFOP00000011667	PPR	PF01535.20	2.9e-38	2	6
ENSPFOP00000011667	PPR	PF01535.20	2.9e-38	3	6
ENSPFOP00000011667	PPR	PF01535.20	2.9e-38	4	6
ENSPFOP00000011667	PPR	PF01535.20	2.9e-38	5	6
ENSPFOP00000011667	PPR	PF01535.20	2.9e-38	6	6

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPFOT00000025304	-	4466	-	ENSPFOP00000022087	1383 (aa)	-	A0A096LSE6
ENSPFOT00000011684	-	4659	XM_007551191	ENSPFOP00000011667	1412 (aa)	XP_007551253	A0A087Y0W4

Gene Model

Click here to download ENSPFOG00000011227's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000011227's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPFOG00000011227	lrpprc	99	73.573	ENSAPOG00000016610	lrpprc	99	73.573	Acanthochromis_polyacanthus
ENSPFOG00000011227	lrpprc	97	51.379	ENSAMEG00000005852	LRPPRC	100	51.379	Ailuropoda_melanoleuca
ENSPFOG00000011227	lrpprc	99	70.341	ENSACIG00000009604	lrpprc	99	70.341	Amphilophus_citrinellus
ENSPFOG00000011227	lrpprc	99	74.719	ENSAOCG00000005886	lrpprc	99	74.719	Amphiprion_ocellaris
ENSPFOG00000011227	lrpprc	99	70.634	ENSAPEG00000002937	lrpprc	98	70.634	Amphiprion_percula
ENSPFOG00000011227	lrpprc	91	74.486	ENSATEG00000010555	lrpprc	96	73.597	Anabas_testudineus
ENSPFOG00000011227	lrpprc	97	55.728	ENSACAG00000029278	LRPPRC	99	54.126	Anolis_carolinensis
ENSPFOG00000011227	lrpprc	99	50.785	ENSANAG00000027440	LRPPRC	97	54.717	Aotus_nancymaae
ENSPFOG00000011227	lrpprc	98	69.253	ENSACLG00000023712	lrpprc	92	78.013	Astatotilapia_calliptera
ENSPFOG00000011227	lrpprc	99	50.321	ENSCJAG00000000794	LRPPRC	97	54.528	Callithrix_jacchus
ENSPFOG00000011227	lrpprc	98	50.901	ENSCHIG00000020173	LRPPRC	99	50.600	Capra_hircus
ENSPFOG00000011227	lrpprc	97	41.673	ENSCAPG00000013631	LRPPRC	99	41.703	Cavia_aperea
ENSPFOG00000011227	lrpprc	87	49.423	ENSCPOG00000000204	LRPPRC	99	49.464	Cavia_porcellus
ENSPFOG00000011227	lrpprc	99	50.534	ENSCCAG00000031900	LRPPRC	97	53.918	Cebus_capucinus
ENSPFOG00000011227	lrpprc	97	51.004	ENSCATG00000014187	LRPPRC	97	54.206	Cercocebus_atys
ENSPFOG00000011227	lrpprc	99	49.395	ENSCLAG00000005203	LRPPRC	99	48.839	Chinchilla_lanigera
ENSPFOG00000011227	lrpprc	97	51.412	ENSCSAG00000013233	LRPPRC	99	50.719	Chlorocebus_sabaeus
ENSPFOG00000011227	lrpprc	84	50.225	ENSCHOG00000003631	LRPPRC	84	50.000	Choloepus_hoffmanni
ENSPFOG00000011227	lrpprc	97	49.482	ENSCANG00000034961	LRPPRC	99	56.436	Colobus_angolensis_palliatus
ENSPFOG00000011227	lrpprc	99	49.964	ENSCGRG00001016261	Lrpprc	99	49.505	Cricetulus_griseus_chok1gshd
ENSPFOG00000011227	lrpprc	99	49.964	ENSCGRG00000004072	Lrpprc	99	49.505	Cricetulus_griseus_crigri
ENSPFOG00000011227	lrpprc	99	50.420	ENSCSEG00000003850	lrpprc	96	57.422	Cynoglossus_semilaevis
ENSPFOG00000011227	lrpprc	99	81.883	ENSCVAG00000012967	lrpprc	99	81.883	Cyprinodon_variegatus
ENSPFOG00000011227	lrpprc	99	57.792	ENSDARG00000043970	lrpprc	98	57.792	Danio_rerio
ENSPFOG00000011227	lrpprc	99	51.140	ENSDNOG00000012594	-	99	50.847	Dasypus_novemcinctus
ENSPFOG00000011227	lrpprc	80	41.944	ENSDNOG00000032336	-	96	41.944	Dasypus_novemcinctus
ENSPFOG00000011227	lrpprc	99	50.000	ENSDORG00000012233	Lrpprc	99	50.318	Dipodomys_ordii
ENSPFOG00000011227	lrpprc	99	51.028	ENSETEG00000006657	LRPPRC	99	50.914	Echinops_telfairi
ENSPFOG00000011227	lrpprc	77	52.834	ENSEEUG00000012340	LRPPRC	79	54.364	Erinaceus_europaeus
ENSPFOG00000011227	lrpprc	97	58.474	ENSELUG00000012803	lrpprc	99	58.474	Esox_lucius
ENSPFOG00000011227	lrpprc	99	51.599	ENSFCAG00000013468	LRPPRC	99	51.340	Felis_catus
ENSPFOG00000011227	lrpprc	96	50.225	ENSFALG00000012738	LRPPRC	98	50.263	Ficedula_albicollis
ENSPFOG00000011227	lrpprc	99	48.758	ENSFDAG00000015328	LRPPRC	99	48.317	Fukomys_damarensis
ENSPFOG00000011227	lrpprc	99	78.556	ENSFHEG00000019604	lrpprc	99	78.556	Fundulus_heteroclitus
ENSPFOG00000011227	lrpprc	99	62.859	ENSGMOG00000008337	lrpprc	99	62.261	Gadus_morhua
ENSPFOG00000011227	lrpprc	100	90.530	ENSGAFG00000001455	lrpprc	100	90.530	Gambusia_affinis
ENSPFOG00000011227	lrpprc	99	69.121	ENSGACG00000010679	lrpprc	99	71.164	Gasterosteus_aculeatus
ENSPFOG00000011227	lrpprc	100	75.685	ENSHBUG00000000393	lrpprc	98	75.685	Haplochromis_burtoni
ENSPFOG00000011227	lrpprc	99	48.472	ENSHGLG00000006123	LRPPRC	99	47.857	Heterocephalus_glaber_female
ENSPFOG00000011227	lrpprc	60	47.199	ENSHGLG00100005960	-	99	47.255	Heterocephalus_glaber_male
ENSPFOG00000011227	lrpprc	98	70.448	ENSHCOG00000002107	lrpprc	100	70.448	Hippocampus_comes
ENSPFOG00000011227	lrpprc	99	61.781	ENSIPUG00000009406	lrpprc	99	61.781	Ictalurus_punctatus
ENSPFOG00000011227	lrpprc	99	50.213	ENSSTOG00000011185	LRPPRC	99	50.000	Ictidomys_tridecemlineatus
ENSPFOG00000011227	lrpprc	99	50.178	ENSJJAG00000020475	Lrpprc	100	49.824	Jaculus_jaculus
ENSPFOG00000011227	lrpprc	99	66.165	ENSKMAG00000003287	lrpprc	85	66.165	Kryptolebias_marmoratus
ENSPFOG00000011227	lrpprc	99	62.771	ENSLBEG00000023225	lrpprc	96	71.401	Labrus_bergylta
ENSPFOG00000011227	lrpprc	99	58.146	ENSLACG00000014030	LRPPRC	99	57.751	Latimeria_chalumnae
ENSPFOG00000011227	lrpprc	99	60.851	ENSLOCG00000016390	lrpprc	97	60.851	Lepisosteus_oculatus
ENSPFOG00000011227	lrpprc	99	49.469	ENSLAFG00000008614	LRPPRC	99	49.160	Loxodonta_africana
ENSPFOG00000011227	lrpprc	97	51.152	ENSMFAG00000041560	LRPPRC	99	55.375	Macaca_fascicularis
ENSPFOG00000011227	lrpprc	99	49.605	ENSMMUG00000019841	LRPPRC	99	54.603	Macaca_mulatta
ENSPFOG00000011227	lrpprc	99	49.682	ENSMNEG00000031613	LRPPRC	97	54.019	Macaca_nemestrina
ENSPFOG00000011227	lrpprc	98	63.386	ENSMAMG00000021835	lrpprc	98	63.121	Mastacembelus_armatus
ENSPFOG00000011227	lrpprc	100	75.755	ENSMZEG00005027379	lrpprc	99	75.755	Maylandia_zebra
ENSPFOG00000011227	lrpprc	99	49.822	ENSMAUG00000012118	Lrpprc	99	50.037	Mesocricetus_auratus
ENSPFOG00000011227	lrpprc	99	50.640	ENSMICG00000010486	LRPPRC	97	54.120	Microcebus_murinus
ENSPFOG00000011227	lrpprc	99	50.533	ENSMOCG00000006048	Lrpprc	99	50.423	Microtus_ochrogaster
ENSPFOG00000011227	lrpprc	99	66.099	ENSMMOG00000007830	lrpprc	94	75.538	Mola_mola
ENSPFOG00000011227	lrpprc	97	50.478	ENSMODG00000000648	LRPPRC	99	50.515	Monodelphis_domestica
ENSPFOG00000011227	lrpprc	100	68.243	ENSMALG00000001271	lrpprc	99	68.243	Monopterus_albus
ENSPFOG00000011227	lrpprc	99	50.779	ENSMPUG00000011800	LRPPRC	100	52.327	Mustela_putorius_furo
ENSPFOG00000011227	lrpprc	99	50.999	ENSMLUG00000010575	LRPPRC	99	50.774	Myotis_lucifugus
ENSPFOG00000011227	lrpprc	99	49.714	ENSNGAG00000013069	Lrpprc	99	49.682	Nannospalax_galili
ENSPFOG00000011227	lrpprc	96	68.015	ENSNBRG00000013202	lrpprc	92	76.744	Neolamprologus_brichardi
ENSPFOG00000011227	lrpprc	99	50.071	ENSNLEG00000016782	LRPPRC	96	54.647	Nomascus_leucogenys
ENSPFOG00000011227	lrpprc	87	55.000	ENSOPRG00000016774	LRPPRC	91	48.352	Ochotona_princeps
ENSPFOG00000011227	lrpprc	99	49.465	ENSODEG00000011211	LRPPRC	99	49.296	Octodon_degus
ENSPFOG00000011227	lrpprc	100	75.316	ENSONIG00000000917	lrpprc	99	74.681	Oreochromis_niloticus
ENSPFOG00000011227	lrpprc	75	46.968	ENSOANG00000014670	-	100	46.968	Ornithorhynchus_anatinus
ENSPFOG00000011227	lrpprc	99	51.105	ENSOCUG00000015046	LRPPRC	95	50.880	Oryctolagus_cuniculus
ENSPFOG00000011227	lrpprc	99	69.943	ENSORLG00000004605	lrpprc	96	69.894	Oryzias_latipes
ENSPFOG00000011227	lrpprc	93	73.436	ENSORLG00020012536	lrpprc	99	73.264	Oryzias_latipes_hni
ENSPFOG00000011227	lrpprc	99	67.941	ENSORLG00015018270	lrpprc	99	67.728	Oryzias_latipes_hsok
ENSPFOG00000011227	lrpprc	99	50.496	ENSOGAG00000012798	LRPPRC	100	50.315	Otolemur_garnettii
ENSPFOG00000011227	lrpprc	97	51.634	ENSOARG00000006522	LRPPRC	99	50.600	Ovis_aries
ENSPFOG00000011227	lrpprc	99	49.502	ENSPPAG00000040876	LRPPRC	97	54.190	Pan_paniscus
ENSPFOG00000011227	lrpprc	99	51.463	ENSPPRG00000006578	LRPPRC	99	50.989	Panthera_pardus
ENSPFOG00000011227	lrpprc	97	52.381	ENSPTIG00000000933	LRPPRC	96	52.420	Panthera_tigris_altaica
ENSPFOG00000011227	lrpprc	99	50.499	ENSPTRG00000011880	LRPPRC	97	54.579	Pan_troglodytes
ENSPFOG00000011227	lrpprc	97	51.078	ENSPANG00000020731	LRPPRC	97	54.019	Papio_anubis
ENSPFOG00000011227	lrpprc	97	48.205	ENSPKIG00000022232	lrpprc	97	57.364	Paramormyrops_kingsleyae
ENSPFOG00000011227	lrpprc	62	54.335	ENSPSIG00000006830	-	98	54.398	Pelodiscus_sinensis
ENSPFOG00000011227	lrpprc	68	60.512	ENSPMGG00000016597	lrpprc	96	60.577	Periophthalmus_magnuspinnatus
ENSPFOG00000011227	lrpprc	95	46.420	ENSPMAG00000002147	lrpprc	99	46.456	Petromyzon_marinus
ENSPFOG00000011227	lrpprc	100	99.221	ENSPLAG00000004018	lrpprc	100	99.221	Poecilia_latipinna
ENSPFOG00000011227	lrpprc	100	99.504	ENSPMEG00000016425	lrpprc	100	99.504	Poecilia_mexicana
ENSPFOG00000011227	lrpprc	100	96.955	ENSPREG00000003662	lrpprc	100	96.955	Poecilia_reticulata
ENSPFOG00000011227	lrpprc	58	47.578	ENSPPYG00000029532	-	99	47.578	Pongo_abelii
ENSPFOG00000011227	lrpprc	81	51.673	ENSPCAG00000001430	LRPPRC	84	50.170	Procavia_capensis
ENSPFOG00000011227	lrpprc	99	48.481	ENSPVAG00000002007	LRPPRC	99	48.658	Pteropus_vampyrus
ENSPFOG00000011227	lrpprc	100	66.975	ENSPNYG00000000756	lrpprc	90	77.447	Pundamilia_nyererei
ENSPFOG00000011227	lrpprc	99	64.165	ENSPNAG00000002895	lrpprc	99	64.165	Pygocentrus_nattereri
ENSPFOG00000011227	lrpprc	99	49.576	ENSRNOG00000005877	Lrpprc	99	49.682	Rattus_norvegicus
ENSPFOG00000011227	lrpprc	99	48.875	ENSRBIG00000031552	LRPPRC	99	49.158	Rhinopithecus_bieti
ENSPFOG00000011227	lrpprc	99	50.357	ENSSBOG00000011807	LRPPRC	97	54.869	Saimiri_boliviensis_boliviensis
ENSPFOG00000011227	lrpprc	97	50.111	ENSSHAG00000018725	LRPPRC	99	50.149	Sarcophilus_harrisii
ENSPFOG00000011227	lrpprc	99	55.000	ENSSFOG00015001042	lrpprc	99	55.000	Scleropages_formosus
ENSPFOG00000011227	lrpprc	99	71.429	ENSSDUG00000019062	lrpprc	99	71.429	Seriola_dumerili
ENSPFOG00000011227	lrpprc	99	63.140	ENSSLDG00000023028	lrpprc	99	64.164	Seriola_lalandi_dorsalis
ENSPFOG00000011227	lrpprc	92	48.938	ENSSARG00000000426	LRPPRC	99	48.611	Sorex_araneus
ENSPFOG00000011227	lrpprc	99	65.021	ENSSPAG00000000162	lrpprc	99	65.021	Stegastes_partitus
ENSPFOG00000011227	lrpprc	99	50.890	ENSSSCG00000008452	LRPPRC	99	50.636	Sus_scrofa
ENSPFOG00000011227	lrpprc	95	49.585	ENSTGUG00000003759	LRPPRC	99	49.622	Taeniopygia_guttata
ENSPFOG00000011227	lrpprc	100	67.260	ENSTRUG00000008409	lrpprc	96	67.260	Takifugu_rubripes
ENSPFOG00000011227	lrpprc	99	65.938	ENSTNIG00000007470	lrpprc	99	66.568	Tetraodon_nigroviridis
ENSPFOG00000011227	lrpprc	99	49.503	ENSTTRG00000006403	LRPPRC	99	49.532	Tursiops_truncatus
ENSPFOG00000011227	lrpprc	97	49.257	ENSVPAG00000008993	LRPPRC	99	49.294	Vicugna_pacos
ENSPFOG00000011227	lrpprc	99	56.638	ENSXETG00000009296	lrpprc	98	56.747	Xenopus_tropicalis
ENSPFOG00000011227	lrpprc	99	80.071	ENSXCOG00000013343	lrpprc	97	81.071	Xiphophorus_couchianus
ENSPFOG00000011227	lrpprc	100	89.682	ENSXMAG00000018108	lrpprc	100	89.682	Xiphophorus_maculatus