EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPFOG00000011590 (Gene tree)
Gene ID: -
Gene Symbol: tnrc6c2
Alias: -
Full Name: trinucleotide repeat containing 6C2
Gene Type: protein_coding
Species: Poecilia_formosa
Status: putative
Strand: Plus strand
Length: 24793 bases
Position: chrKI519653.1:207520-232312
Accession: ZDB-GENE-061207-48
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPFOP00000011791	RRM_1	PF00076.22	0.00016	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPFOT00000011808	-	4905	-	ENSPFOP00000011791	1634 (aa)	-	A0A087Y188

Gene Model

Click here to download ENSPFOG00000011590's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000011590's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPFOG00000011590	tnrc6c2	52	66.413	ENSPFOG00000012560	tnrc6c1	99	58.115

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPFOG00000011590	tnrc6c2	99	77.648	ENSAOCG00000017648	tnrc6c2	91	77.648	Amphiprion_ocellaris
ENSPFOG00000011590	tnrc6c2	90	74.226	ENSATEG00000003656	tnrc6c2	99	74.346	Anabas_testudineus
ENSPFOG00000011590	tnrc6c2	99	77.119	ENSACLG00000006469	tnrc6c2	92	77.436	Astatotilapia_calliptera
ENSPFOG00000011590	tnrc6c2	90	61.229	ENSAMXG00000009579	tnrc6c2	96	61.915	Astyanax_mexicanus
ENSPFOG00000011590	tnrc6c2	53	64.017	ENSDARG00000103851	tnrc6c2	99	50.184	Danio_rerio
ENSPFOG00000011590	tnrc6c2	86	54.080	ENSELUG00000008149	-	91	68.121	Esox_lucius
ENSPFOG00000011590	tnrc6c2	90	58.985	ENSELUG00000007206	tnrc6c2	99	58.736	Esox_lucius
ENSPFOG00000011590	tnrc6c2	96	81.967	ENSFHEG00000003901	tnrc6c2	95	83.513	Fundulus_heteroclitus
ENSPFOG00000011590	tnrc6c2	99	64.709	ENSGACG00000019401	tnrc6c2	98	64.191	Gasterosteus_aculeatus
ENSPFOG00000011590	tnrc6c2	99	77.119	ENSHBUG00000018310	tnrc6c2	92	77.436	Haplochromis_burtoni
ENSPFOG00000011590	tnrc6c2	53	74.051	ENSHCOG00000017802	tnrc6c2	91	73.312	Hippocampus_comes
ENSPFOG00000011590	tnrc6c2	90	48.789	ENSIPUG00000022767	tnrc6c2	99	47.790	Ictalurus_punctatus
ENSPFOG00000011590	tnrc6c2	53	76.907	ENSMAMG00000001718	tnrc6c2	95	77.331	Mastacembelus_armatus
ENSPFOG00000011590	tnrc6c2	99	77.119	ENSMZEG00005023905	tnrc6c2	92	77.436	Maylandia_zebra
ENSPFOG00000011590	tnrc6c2	53	78.504	ENSMALG00000020932	tnrc6c2	95	78.188	Monopterus_albus
ENSPFOG00000011590	tnrc6c2	90	75.833	ENSNBRG00000000452	tnrc6c2	99	75.639	Neolamprologus_brichardi
ENSPFOG00000011590	tnrc6c2	88	72.756	ENSONIG00000018123	tnrc6c2	99	72.914	Oreochromis_niloticus
ENSPFOG00000011590	tnrc6c2	99	77.941	ENSORLG00000003327	tnrc6c2	91	75.840	Oryzias_latipes
ENSPFOG00000011590	tnrc6c2	99	76.155	ENSORLG00020010730	tnrc6c2	92	71.976	Oryzias_latipes_hni
ENSPFOG00000011590	tnrc6c2	99	78.046	ENSORLG00015009232	tnrc6c2	91	76.050	Oryzias_latipes_hsok
ENSPFOG00000011590	tnrc6c2	99	78.367	ENSOMEG00000017952	tnrc6c2	91	76.471	Oryzias_melastigma
ENSPFOG00000011590	tnrc6c2	90	88.176	ENSPLAG00000006992	tnrc6c2	99	88.043	Poecilia_latipinna
ENSPFOG00000011590	tnrc6c2	99	94.894	ENSPMEG00000012946	tnrc6c2	94	95.102	Poecilia_mexicana
ENSPFOG00000011590	tnrc6c2	90	88.091	ENSPREG00000015823	tnrc6c2	99	87.776	Poecilia_reticulata
ENSPFOG00000011590	tnrc6c2	90	77.013	ENSPNYG00000002582	tnrc6c2	95	77.331	Pundamilia_nyererei
ENSPFOG00000011590	tnrc6c2	52	60.730	ENSPNAG00000026838	tnrc6c2	99	51.134	Pygocentrus_nattereri
ENSPFOG00000011590	tnrc6c2	90	76.564	ENSSMAG00000015145	tnrc6c2	95	75.186	Scophthalmus_maximus
ENSPFOG00000011590	tnrc6c2	53	79.003	ENSSDUG00000020741	tnrc6c2	95	78.155	Seriola_dumerili
ENSPFOG00000011590	tnrc6c2	53	78.791	ENSSLDG00000002077	tnrc6c2	95	77.943	Seriola_lalandi_dorsalis
ENSPFOG00000011590	tnrc6c2	99	79.873	ENSSPAG00000013052	tnrc6c2	91	80.191	Stegastes_partitus
ENSPFOG00000011590	tnrc6c2	95	80.916	ENSTNIG00000004178	tnrc6c2	99	66.887	Tetraodon_nigroviridis
ENSPFOG00000011590	tnrc6c2	90	84.321	ENSXCOG00000013252	tnrc6c2	99	84.568	Xiphophorus_couchianus
ENSPFOG00000011590	tnrc6c2	90	91.022	ENSXMAG00000006739	tnrc6c2	95	90.909	Xiphophorus_maculatus