EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPFOG00000011606 (Gene tree)
Gene ID: 103142035
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Poecilia_formosa
Status: putative
Strand: Minus strand
Length: 16774 bases
Position: chrKI519702.1:2072402-2089175
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPFOP00000011768	zf-CCHC	PF00098.23	2.7e-07	1	1
ENSPFOP00000011768	PAP_assoc	PF03828.19	7.9e-26	1	2
ENSPFOP00000011768	PAP_assoc	PF03828.19	7.9e-26	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPFOT00000011785	-	5651	-	ENSPFOP00000011768	1073 (aa)	-	A0A087Y165

Gene Model

Click here to download ENSPFOG00000011606's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000011606's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPFOG00000011606	-	53	37.743	ENSPFOG00000017634	tent2	64	37.597
ENSPFOG00000011606	-	77	68.889	ENSPFOG00000002439	TUT4	62	68.460

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPFOG00000011606	-	81	75.297	ENSG00000083223	TUT7	100	66.400	Homo_sapiens
ENSPFOG00000011606	-	91	79.728	ENSAPOG00000012979	TUT7	89	79.576	Acanthochromis_polyacanthus
ENSPFOG00000011606	-	81	76.010	ENSAMEG00000004148	TUT7	59	75.467	Ailuropoda_melanoleuca
ENSPFOG00000011606	-	93	75.061	ENSAOCG00000004223	-	86	75.152	Amphiprion_ocellaris
ENSPFOG00000011606	-	97	52.821	ENSAPLG00000015510	TUT7	61	75.701	Anas_platyrhynchos
ENSPFOG00000011606	-	90	53.353	ENSACAG00000000279	TUT7	81	75.946	Anolis_carolinensis
ENSPFOG00000011606	-	88	67.335	ENSANAG00000025848	TUT7	69	66.346	Aotus_nancymaae
ENSPFOG00000011606	-	91	76.232	ENSACLG00000018198	TUT7	90	75.942	Astatotilapia_calliptera
ENSPFOG00000011606	-	88	65.709	ENSBTAG00000001737	TUT7	72	57.886	Bos_taurus
ENSPFOG00000011606	-	88	67.335	ENSCJAG00000001845	TUT7	69	66.346	Callithrix_jacchus
ENSPFOG00000011606	-	90	67.245	ENSCAFG00000001331	TUT7	60	74.032	Canis_familiaris
ENSPFOG00000011606	-	97	67.245	ENSCAFG00020023620	TUT7	60	74.032	Canis_lupus_dingo
ENSPFOG00000011606	-	85	67.475	ENSCHIG00000017690	TUT7	63	75.000	Capra_hircus
ENSPFOG00000011606	-	88	67.002	ENSTSYG00000008907	TUT7	72	65.705	Carlito_syrichta
ENSPFOG00000011606	-	89	64.232	ENSCPOG00000002500	TUT7	58	74.533	Cavia_porcellus
ENSPFOG00000011606	-	88	67.535	ENSCATG00000032888	TUT7	63	75.000	Cercocebus_atys
ENSPFOG00000011606	-	88	67.068	ENSCLAG00000007535	TUT7	66	66.471	Chinchilla_lanigera
ENSPFOG00000011606	-	89	66.926	ENSCSAG00000007408	TUT7	63	75.000	Chlorocebus_sabaeus
ENSPFOG00000011606	-	83	65.011	ENSCHOG00000011129	TUT7	56	72.798	Choloepus_hoffmanni
ENSPFOG00000011606	-	82	77.136	ENSCPBG00000005272	TUT7	57	77.804	Chrysemys_picta_bellii
ENSPFOG00000011606	-	88	67.807	ENSCANG00000035790	TUT7	69	66.026	Colobus_angolensis_palliatus
ENSPFOG00000011606	-	82	73.198	ENSCGRG00001020605	-	61	73.576	Cricetulus_griseus_chok1gshd
ENSPFOG00000011606	-	82	73.198	ENSCGRG00000016585	-	60	73.576	Cricetulus_griseus_crigri
ENSPFOG00000011606	-	91	72.090	ENSCSEG00000007068	TUT7	91	71.642	Cynoglossus_semilaevis
ENSPFOG00000011606	-	91	79.294	ENSCVAG00000012526	-	92	80.061	Cyprinodon_variegatus
ENSPFOG00000011606	-	87	50.067	ENSDARG00000074645	CABZ01032476.1	83	49.933	Danio_rerio
ENSPFOG00000011606	-	92	65.299	ENSDNOG00000010663	TUT7	58	74.032	Dasypus_novemcinctus
ENSPFOG00000011606	-	68	75.714	ENSDORG00000009046	-	69	66.667	Dipodomys_ordii
ENSPFOG00000011606	-	74	81.181	ENSETEG00000007739	TUT7	50	81.181	Echinops_telfairi
ENSPFOG00000011606	-	90	66.926	ENSEASG00005020165	TUT7	59	75.467	Equus_asinus_asinus
ENSPFOG00000011606	-	90	66.926	ENSECAG00000014831	TUT7	59	75.467	Equus_caballus
ENSPFOG00000011606	-	90	75.238	ENSEEUG00000012794	TUT7	62	58.314	Erinaceus_europaeus
ENSPFOG00000011606	-	98	63.158	ENSELUG00000013049	-	85	63.158	Esox_lucius
ENSPFOG00000011606	-	86	68.737	ENSFCAG00000003491	TUT7	69	66.987	Felis_catus
ENSPFOG00000011606	-	87	68.699	ENSFALG00000003541	TUT7	61	76.347	Ficedula_albicollis
ENSPFOG00000011606	-	81	74.584	ENSFDAG00000002315	TUT7	58	73.893	Fukomys_damarensis
ENSPFOG00000011606	-	90	84.675	ENSFHEG00000004770	-	91	84.675	Fundulus_heteroclitus
ENSPFOG00000011606	-	92	73.418	ENSGMOG00000001464	-	91	72.694	Gadus_morhua
ENSPFOG00000011606	-	84	70.208	ENSGALG00000012607	ZCCHC6	58	75.171	Gallus_gallus
ENSPFOG00000011606	-	96	90.646	ENSGAFG00000017141	-	84	91.472	Gambusia_affinis
ENSPFOG00000011606	-	96	74.857	ENSGACG00000004735	TUT7	99	74.130	Gasterosteus_aculeatus
ENSPFOG00000011606	-	82	73.672	ENSGAGG00000013087	TUT7	59	74.299	Gopherus_agassizii
ENSPFOG00000011606	-	88	67.335	ENSGGOG00000007523	ZCCHC6	69	66.026	Gorilla_gorilla
ENSPFOG00000011606	-	81	75.059	ENSHGLG00000018427	TUT7	61	74.533	Heterocephalus_glaber_female
ENSPFOG00000011606	-	81	75.059	ENSHGLG00100004701	TUT7	61	74.533	Heterocephalus_glaber_male
ENSPFOG00000011606	-	88	66.932	ENSSTOG00000000586	TUT7	60	74.766	Ictidomys_tridecemlineatus
ENSPFOG00000011606	-	82	71.111	ENSJJAG00000000106	-	68	67.110	Jaculus_jaculus
ENSPFOG00000011606	-	93	72.378	ENSLBEG00000015545	-	87	72.378	Labrus_bergylta
ENSPFOG00000011606	-	88	67.446	ENSLACG00000001637	TUT7	62	67.251	Latimeria_chalumnae
ENSPFOG00000011606	-	91	66.362	ENSLOCG00000002472	TUT7	66	68.269	Lepisosteus_oculatus
ENSPFOG00000011606	-	81	62.597	ENSLAFG00000007884	TUT7	79	62.597	Loxodonta_africana
ENSPFOG00000011606	-	88	67.535	ENSMFAG00000000971	TUT7	63	75.000	Macaca_fascicularis
ENSPFOG00000011606	-	88	67.331	ENSMMUG00000003401	TUT7	61	75.000	Macaca_mulatta
ENSPFOG00000011606	-	88	67.735	ENSMNEG00000031427	TUT7	62	75.000	Macaca_nemestrina
ENSPFOG00000011606	-	88	67.735	ENSMLEG00000027049	TUT7	63	75.000	Mandrillus_leucophaeus
ENSPFOG00000011606	-	89	79.777	ENSMAMG00000011815	TUT7	91	79.618	Mastacembelus_armatus
ENSPFOG00000011606	-	91	76.232	ENSMZEG00005012809	TUT7	90	75.942	Maylandia_zebra
ENSPFOG00000011606	-	79	68.483	ENSMGAG00000006542	TUT7	60	66.818	Meleagris_gallopavo
ENSPFOG00000011606	-	87	68.337	ENSMAUG00000006963	-	60	73.576	Mesocricetus_auratus
ENSPFOG00000011606	-	88	66.733	ENSMICG00000016944	TUT7	63	75.000	Microcebus_murinus
ENSPFOG00000011606	-	71	72.870	ENSMOCG00000007812	-	72	65.015	Microtus_ochrogaster
ENSPFOG00000011606	-	81	73.576	ENSMODG00000003542	TUT7	59	73.576	Monodelphis_domestica
ENSPFOG00000011606	-	91	77.399	ENSMALG00000000634	TUT7	89	76.780	Monopterus_albus
ENSPFOG00000011606	-	82	72.523	MGP_CAROLIEiJ_G0018612	-	59	72.893	Mus_caroli
ENSPFOG00000011606	-	82	72.297	ENSMUSG00000035248	Tut7	63	72.665	Mus_musculus
ENSPFOG00000011606	-	82	72.135	MGP_PahariEiJ_G0019676	-	62	72.893	Mus_pahari
ENSPFOG00000011606	-	82	72.523	MGP_SPRETEiJ_G0019491	-	67	72.893	Mus_spretus
ENSPFOG00000011606	-	88	69.028	ENSMPUG00000002191	TUT7	64	64.717	Mustela_putorius_furo
ENSPFOG00000011606	-	94	62.762	ENSMLUG00000001298	TUT7	60	75.231	Myotis_lucifugus
ENSPFOG00000011606	-	75	67.606	ENSNGAG00000022758	-	71	65.300	Nannospalax_galili
ENSPFOG00000011606	-	89	79.598	ENSNBRG00000021961	TUT7	88	79.289	Neolamprologus_brichardi
ENSPFOG00000011606	-	88	67.335	ENSNLEG00000005138	TUT7	69	66.026	Nomascus_leucogenys
ENSPFOG00000011606	-	71	54.630	ENSMEUG00000006540	TUT7	52	54.907	Notamacropus_eugenii
ENSPFOG00000011606	-	81	69.834	ENSOPRG00000002893	TUT7	51	70.264	Ochotona_princeps
ENSPFOG00000011606	-	83	64.972	ENSODEG00000006904	-	66	67.110	Octodon_degus
ENSPFOG00000011606	-	99	76.568	ENSONIG00000017001	TUT7	98	76.568	Oreochromis_niloticus
ENSPFOG00000011606	-	81	74.584	ENSOCUG00000010949	TUT7	55	74.299	Oryctolagus_cuniculus
ENSPFOG00000011606	-	91	63.158	ENSORLG00000001714	-	92	62.857	Oryzias_latipes
ENSPFOG00000011606	-	91	69.466	ENSORLG00020007882	-	92	69.160	Oryzias_latipes_hni
ENSPFOG00000011606	-	91	64.660	ENSORLG00015017233	-	91	64.506	Oryzias_latipes_hsok
ENSPFOG00000011606	-	78	79.477	ENSOMEG00000015528	-	84	69.673	Oryzias_melastigma
ENSPFOG00000011606	-	82	75.297	ENSOGAG00000015630	TUT7	59	74.766	Otolemur_garnettii
ENSPFOG00000011606	-	85	67.273	ENSOARG00000008732	TUT7	61	74.766	Ovis_aries
ENSPFOG00000011606	-	88	67.535	ENSPPAG00000038548	TUT7	60	75.234	Pan_paniscus
ENSPFOG00000011606	-	88	67.050	ENSPPRG00000011084	TUT7	72	65.325	Panthera_pardus
ENSPFOG00000011606	-	88	67.050	ENSPTIG00000007881	TUT7	72	65.325	Panthera_tigris_altaica
ENSPFOG00000011606	-	88	67.335	ENSPTRG00000021076	TUT7	69	66.026	Pan_troglodytes
ENSPFOG00000011606	-	88	67.331	ENSPANG00000024890	TUT7	65	75.000	Papio_anubis
ENSPFOG00000011606	-	99	56.309	ENSPKIG00000022326	TUT7	67	71.400	Paramormyrops_kingsleyae
ENSPFOG00000011606	-	82	74.550	ENSPSIG00000003600	TUT7	57	75.000	Pelodiscus_sinensis
ENSPFOG00000011606	-	88	68.064	ENSPEMG00000014030	-	62	73.349	Peromyscus_maniculatus_bairdii
ENSPFOG00000011606	-	80	75.234	ENSPCIG00000018302	TUT7	59	75.234	Phascolarctos_cinereus
ENSPFOG00000011606	-	91	98.773	ENSPLAG00000006121	TUT7	91	98.773	Poecilia_latipinna
ENSPFOG00000011606	-	91	89.877	ENSPREG00000009118	TUT7	89	89.877	Poecilia_reticulata
ENSPFOG00000011606	-	88	67.735	ENSPPYG00000019340	TUT7	60	75.234	Pongo_abelii
ENSPFOG00000011606	-	80	71.046	ENSPCAG00000011630	TUT7	50	71.046	Procavia_capensis
ENSPFOG00000011606	-	88	67.470	ENSPCOG00000023407	TUT7	72	66.346	Propithecus_coquereli
ENSPFOG00000011606	-	89	66.996	ENSPVAG00000004589	TUT7	65	74.766	Pteropus_vampyrus
ENSPFOG00000011606	-	91	76.232	ENSPNYG00000004149	TUT7	90	75.942	Pundamilia_nyererei
ENSPFOG00000011606	-	88	64.491	ENSRNOG00000016629	Tut7	60	72.210	Rattus_norvegicus
ENSPFOG00000011606	-	88	61.811	ENSRBIG00000016827	TUT7	69	66.026	Rhinopithecus_bieti
ENSPFOG00000011606	-	88	67.535	ENSRROG00000034432	TUT7	69	66.026	Rhinopithecus_roxellana
ENSPFOG00000011606	-	94	75.701	ENSSHAG00000008290	TUT7	69	75.701	Sarcophilus_harrisii
ENSPFOG00000011606	-	99	55.238	ENSSFOG00015009813	zcchc6	68	71.400	Scleropages_formosus
ENSPFOG00000011606	-	91	77.211	ENSSDUG00000012876	TUT7	92	77.061	Seriola_dumerili
ENSPFOG00000011606	-	88	62.698	ENSSARG00000009763	TUT7	60	69.784	Sorex_araneus
ENSPFOG00000011606	-	86	68.200	ENSSPUG00000004029	TUT7	66	67.383	Sphenodon_punctatus
ENSPFOG00000011606	-	90	72.061	ENSSPAG00000018387	-	90	72.061	Stegastes_partitus
ENSPFOG00000011606	-	84	72.052	ENSSSCG00000010952	TUT7	60	75.116	Sus_scrofa
ENSPFOG00000011606	-	83	74.661	ENSTGUG00000000624	TUT7	61	76.581	Taeniopygia_guttata
ENSPFOG00000011606	-	96	71.156	ENSTNIG00000015951	TUT7	100	70.695	Tetraodon_nigroviridis
ENSPFOG00000011606	-	82	62.673	ENSTBEG00000010446	TUT7	58	63.785	Tupaia_belangeri
ENSPFOG00000011606	-	88	67.600	ENSTTRG00000004236	TUT7	60	75.234	Tursiops_truncatus
ENSPFOG00000011606	-	67	76.296	ENSUAMG00000027094	-	73	75.300	Ursus_americanus
ENSPFOG00000011606	-	88	68.952	ENSUMAG00000004929	TUT7	59	75.467	Ursus_maritimus
ENSPFOG00000011606	-	88	63.074	ENSVPAG00000001946	TUT7	62	62.378	Vicugna_pacos
ENSPFOG00000011606	-	90	67.437	ENSVVUG00000022427	TUT7	60	74.260	Vulpes_vulpes
ENSPFOG00000011606	-	96	68.031	ENSXETG00000017552	tut7	68	68.031	Xenopus_tropicalis
ENSPFOG00000011606	-	100	91.304	ENSXCOG00000009445	-	86	91.674	Xiphophorus_couchianus