EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPFOG00000011658 (Gene tree)
Gene ID: 103147802
Gene Symbol: rbm38
Alias: -
Full Name: RNA-binding protein 38-like
Gene Type: protein_coding
Species: Poecilia_formosa
Status: putative
Strand: Plus strand
Length: 21489 bases
Position: chrKI519800.1:940540-962028
Accession: 103147802
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPFOP00000011633	RRM_1	PF00076.22	3.7e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPFOT00000011649	-	1163	-	ENSPFOP00000011633	254 (aa)	XP_007566385	A0A087Y0T0

Gene Model

Click here to download ENSPFOG00000011658's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000011658's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPFOG00000011658	rbm38	59	68.790	ENSPFOG00000000022	rbm24b	78	61.140
ENSPFOG00000011658	rbm38	98	59.023	ENSPFOG00000005096	-	100	59.615
ENSPFOG00000011658	rbm38	59	68.790	ENSPFOG00000000019	rbm24b	73	61.140
ENSPFOG00000011658	rbm38	72	61.780	ENSPFOG00000013132	rbm24a	82	63.542

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPFOG00000011658	rbm38	91	58.120	ENSG00000132819	RBM38	91	83.929	Homo_sapiens
ENSPFOG00000011658	rbm38	100	89.764	ENSAPOG00000003301	rbm38	100	89.764	Acanthochromis_polyacanthus
ENSPFOG00000011658	rbm38	98	60.392	ENSAPOG00000009939	-	100	60.236	Acanthochromis_polyacanthus
ENSPFOG00000011658	rbm38	98	61.024	ENSACIG00000012502	-	100	81.197	Amphilophus_citrinellus
ENSPFOG00000011658	rbm38	100	86.220	ENSACIG00000000010	rbm38	100	86.220	Amphilophus_citrinellus
ENSPFOG00000011658	rbm38	95	60.494	ENSAOCG00000012559	RBM38	86	65.049	Amphiprion_ocellaris
ENSPFOG00000011658	rbm38	100	90.157	ENSAOCG00000013497	-	100	90.157	Amphiprion_ocellaris
ENSPFOG00000011658	rbm38	98	59.608	ENSAPEG00000023581	-	100	59.055	Amphiprion_percula
ENSPFOG00000011658	rbm38	100	90.157	ENSAPEG00000013137	rbm38	100	90.157	Amphiprion_percula
ENSPFOG00000011658	rbm38	100	83.858	ENSATEG00000016366	rbm38	100	83.858	Anabas_testudineus
ENSPFOG00000011658	rbm38	98	60.784	ENSATEG00000016710	-	100	59.055	Anabas_testudineus
ENSPFOG00000011658	rbm38	91	57.692	ENSACAG00000016238	RBM38	88	56.223	Anolis_carolinensis
ENSPFOG00000011658	rbm38	91	57.692	ENSANAG00000031959	RBM38	78	90.426	Aotus_nancymaae
ENSPFOG00000011658	rbm38	98	60.700	ENSACLG00000019514	-	100	57.480	Astatotilapia_calliptera
ENSPFOG00000011658	rbm38	95	54.545	ENSAMXG00000038120	rbm38	79	61.458	Astyanax_mexicanus
ENSPFOG00000011658	rbm38	98	58.268	ENSAMXG00000015601	-	100	57.874	Astyanax_mexicanus
ENSPFOG00000011658	rbm38	91	58.974	ENSBTAG00000008105	RBM38	89	56.118	Bos_taurus
ENSPFOG00000011658	rbm38	59	61.184	WBGene00006321	sup-12	78	71.429	Caenorhabditis_elegans
ENSPFOG00000011658	rbm38	91	57.692	ENSCJAG00000019139	RBM38	78	90.426	Callithrix_jacchus
ENSPFOG00000011658	rbm38	91	57.692	ENSCAFG00020021943	RBM38	89	56.838	Canis_lupus_dingo
ENSPFOG00000011658	rbm38	91	58.547	ENSCHIG00000002609	RBM38	89	55.556	Capra_hircus
ENSPFOG00000011658	rbm38	91	58.547	ENSCPOG00000012781	RBM38	89	56.410	Cavia_porcellus
ENSPFOG00000011658	rbm38	91	57.692	ENSCCAG00000036872	RBM38	78	90.426	Cebus_capucinus
ENSPFOG00000011658	rbm38	91	58.547	ENSCATG00000032133	RBM38	78	90.426	Cercocebus_atys
ENSPFOG00000011658	rbm38	91	58.974	ENSCLAG00000005906	RBM38	78	64.674	Chinchilla_lanigera
ENSPFOG00000011658	rbm38	91	58.547	ENSCSAG00000015503	RBM38	89	55.983	Chlorocebus_sabaeus
ENSPFOG00000011658	rbm38	92	56.540	ENSCPBG00000024059	RBM38	84	63.298	Chrysemys_picta_bellii
ENSPFOG00000011658	rbm38	59	60.625	ENSCING00000025102	-	53	70.732	Ciona_intestinalis
ENSPFOG00000011658	rbm38	91	44.681	ENSCANG00000030105	-	78	42.979	Colobus_angolensis_palliatus
ENSPFOG00000011658	rbm38	72	64.674	ENSCGRG00001012928	Rbm38	89	56.118	Cricetulus_griseus_chok1gshd
ENSPFOG00000011658	rbm38	98	61.417	ENSCSEG00000004701	-	100	60.236	Cynoglossus_semilaevis
ENSPFOG00000011658	rbm38	84	65.258	ENSCSEG00000020943	rbm38	63	68.041	Cynoglossus_semilaevis
ENSPFOG00000011658	rbm38	100	92.520	ENSCVAG00000015952	rbm38	100	92.520	Cyprinodon_variegatus
ENSPFOG00000011658	rbm38	98	61.961	ENSCVAG00000005472	-	100	59.449	Cyprinodon_variegatus
ENSPFOG00000011658	rbm38	98	62.550	ENSDARG00000058818	rbm38	83	68.293	Danio_rerio
ENSPFOG00000011658	rbm38	91	56.466	ENSDNOG00000032004	RBM38	98	55.172	Dasypus_novemcinctus
ENSPFOG00000011658	rbm38	91	57.692	ENSECAG00000007700	RBM38	89	56.838	Equus_caballus
ENSPFOG00000011658	rbm38	91	56.596	ENSEEUG00000013489	RBM38	89	54.043	Erinaceus_europaeus
ENSPFOG00000011658	rbm38	92	67.949	ENSELUG00000000585	-	100	65.812	Esox_lucius
ENSPFOG00000011658	rbm38	98	59.073	ENSELUG00000005849	-	100	58.301	Esox_lucius
ENSPFOG00000011658	rbm38	91	58.120	ENSFCAG00000042916	RBM38	78	89.362	Felis_catus
ENSPFOG00000011658	rbm38	69	68.750	ENSFALG00000010805	RBM38	88	64.571	Ficedula_albicollis
ENSPFOG00000011658	rbm38	98	60.000	ENSFHEG00000006160	-	100	59.449	Fundulus_heteroclitus
ENSPFOG00000011658	rbm38	100	93.333	ENSFHEG00000017748	rbm38	100	90.945	Fundulus_heteroclitus
ENSPFOG00000011658	rbm38	76	66.146	ENSGMOG00000016655	-	100	66.667	Gadus_morhua
ENSPFOG00000011658	rbm38	92	55.932	ENSGALG00000026081	RBM38	84	62.567	Gallus_gallus
ENSPFOG00000011658	rbm38	93	57.500	ENSGACG00000009873	-	100	56.667	Gasterosteus_aculeatus
ENSPFOG00000011658	rbm38	93	74.262	ENSGACG00000015224	rbm38	100	74.262	Gasterosteus_aculeatus
ENSPFOG00000011658	rbm38	92	56.962	ENSGAGG00000001187	RBM38	84	63.298	Gopherus_agassizii
ENSPFOG00000011658	rbm38	100	85.827	ENSHBUG00000012058	rbm38	100	85.827	Haplochromis_burtoni
ENSPFOG00000011658	rbm38	98	60.700	ENSHBUG00000011778	-	100	57.480	Haplochromis_burtoni
ENSPFOG00000011658	rbm38	91	59.402	ENSHGLG00000015077	RBM38	89	57.265	Heterocephalus_glaber_female
ENSPFOG00000011658	rbm38	100	61.176	ENSHCOG00000019040	rbm38	100	61.176	Hippocampus_comes
ENSPFOG00000011658	rbm38	81	64.423	ENSHCOG00000005622	-	57	64.734	Hippocampus_comes
ENSPFOG00000011658	rbm38	98	57.087	ENSIPUG00000019349	-	100	55.512	Ictalurus_punctatus
ENSPFOG00000011658	rbm38	91	73.222	ENSKMAG00000012402	rbm38	99	73.222	Kryptolebias_marmoratus
ENSPFOG00000011658	rbm38	98	57.692	ENSLBEG00000016163	RBM38	100	58.140	Labrus_bergylta
ENSPFOG00000011658	rbm38	100	84.646	ENSLBEG00000018878	rbm38	100	84.646	Labrus_bergylta
ENSPFOG00000011658	rbm38	98	60.714	ENSLOCG00000003456	rbm38	100	56.746	Lepisosteus_oculatus
ENSPFOG00000011658	rbm38	91	58.547	ENSMFAG00000043808	RBM38	78	90.426	Macaca_fascicularis
ENSPFOG00000011658	rbm38	91	58.547	ENSMMUG00000031391	RBM38	78	90.426	Macaca_mulatta
ENSPFOG00000011658	rbm38	91	58.547	ENSMNEG00000034683	RBM38	78	90.426	Macaca_nemestrina
ENSPFOG00000011658	rbm38	100	87.402	ENSMAMG00000024135	rbm38	100	85.433	Mastacembelus_armatus
ENSPFOG00000011658	rbm38	98	62.205	ENSMAMG00000020499	RBM38	100	60.474	Mastacembelus_armatus
ENSPFOG00000011658	rbm38	100	85.827	ENSMZEG00005026036	rbm38	100	85.827	Maylandia_zebra
ENSPFOG00000011658	rbm38	98	60.700	ENSMZEG00005000849	-	100	57.480	Maylandia_zebra
ENSPFOG00000011658	rbm38	72	65.217	ENSMAUG00000021211	Rbm38	89	56.962	Mesocricetus_auratus
ENSPFOG00000011658	rbm38	91	57.265	ENSMICG00000038011	RBM38	98	56.540	Microcebus_murinus
ENSPFOG00000011658	rbm38	72	65.217	ENSMOCG00000008715	Rbm38	89	56.962	Microtus_ochrogaster
ENSPFOG00000011658	rbm38	98	59.608	ENSMMOG00000020051	-	100	58.661	Mola_mola
ENSPFOG00000011658	rbm38	92	55.508	ENSMODG00000016458	RBM38	91	55.085	Monodelphis_domestica
ENSPFOG00000011658	rbm38	100	70.079	ENSMALG00000022327	rbm38	100	67.829	Monopterus_albus
ENSPFOG00000011658	rbm38	76	69.588	ENSMALG00000004680	RBM38	71	68.394	Monopterus_albus
ENSPFOG00000011658	rbm38	91	58.120	MGP_CAROLIEiJ_G0024745	Rbm38	58	86.667	Mus_caroli
ENSPFOG00000011658	rbm38	91	58.120	ENSMUSG00000027510	Rbm38	58	86.667	Mus_musculus
ENSPFOG00000011658	rbm38	91	57.265	MGP_PahariEiJ_G0026186	Rbm38	58	86.667	Mus_pahari
ENSPFOG00000011658	rbm38	91	58.120	MGP_SPRETEiJ_G0025665	Rbm38	58	86.667	Mus_spretus
ENSPFOG00000011658	rbm38	72	65.217	ENSMPUG00000006518	RBM38	89	62.500	Mustela_putorius_furo
ENSPFOG00000011658	rbm38	91	57.692	ENSMLUG00000011140	RBM38	98	53.846	Myotis_lucifugus
ENSPFOG00000011658	rbm38	98	60.700	ENSNBRG00000022545	-	100	58.203	Neolamprologus_brichardi
ENSPFOG00000011658	rbm38	100	86.220	ENSNBRG00000022685	rbm38	100	86.220	Neolamprologus_brichardi
ENSPFOG00000011658	rbm38	91	59.829	ENSODEG00000007980	RBM38	89	57.563	Octodon_degus
ENSPFOG00000011658	rbm38	98	60.547	ENSONIG00000020324	-	100	58.039	Oreochromis_niloticus
ENSPFOG00000011658	rbm38	98	85.944	ENSONIG00000017073	rbm38	100	85.944	Oreochromis_niloticus
ENSPFOG00000011658	rbm38	78	61.111	ENSOANG00000009259	RBM38	69	62.703	Ornithorhynchus_anatinus
ENSPFOG00000011658	rbm38	100	82.745	ENSORLG00000012154	rbm38	100	79.608	Oryzias_latipes
ENSPFOG00000011658	rbm38	98	57.198	ENSORLG00000027180	-	100	56.693	Oryzias_latipes
ENSPFOG00000011658	rbm38	100	83.529	ENSORLG00020017871	rbm38	100	79.608	Oryzias_latipes_hni
ENSPFOG00000011658	rbm38	100	56.705	ENSORLG00020020751	-	100	56.693	Oryzias_latipes_hni
ENSPFOG00000011658	rbm38	100	83.529	ENSORLG00015012606	rbm38	100	79.608	Oryzias_latipes_hsok
ENSPFOG00000011658	rbm38	98	58.661	ENSORLG00015017040	-	100	58.984	Oryzias_latipes_hsok
ENSPFOG00000011658	rbm38	98	58.039	ENSOMEG00000023912	-	100	57.812	Oryzias_melastigma
ENSPFOG00000011658	rbm38	100	83.529	ENSOMEG00000006805	rbm38	100	79.608	Oryzias_melastigma
ENSPFOG00000011658	rbm38	91	58.547	ENSOGAG00000029136	RBM38	88	55.696	Otolemur_garnettii
ENSPFOG00000011658	rbm38	91	58.120	ENSPPRG00000009507	RBM38	78	89.362	Panthera_pardus
ENSPFOG00000011658	rbm38	77	63.265	ENSPTRG00000013661	RBM38	78	90.426	Pan_troglodytes
ENSPFOG00000011658	rbm38	95	46.939	ENSPANG00000033127	-	89	45.532	Papio_anubis
ENSPFOG00000011658	rbm38	91	58.547	ENSPANG00000020919	-	78	90.426	Papio_anubis
ENSPFOG00000011658	rbm38	98	57.937	ENSPKIG00000018122	-	95	81.982	Paramormyrops_kingsleyae
ENSPFOG00000011658	rbm38	98	56.031	ENSPKIG00000025417	rbm38	83	63.158	Paramormyrops_kingsleyae
ENSPFOG00000011658	rbm38	92	55.696	ENSPSIG00000011649	RBM38	77	61.497	Pelodiscus_sinensis
ENSPFOG00000011658	rbm38	98	57.588	ENSPMGG00000017094	-	100	56.078	Periophthalmus_magnuspinnatus
ENSPFOG00000011658	rbm38	100	72.549	ENSPMGG00000011343	rbm38	100	74.510	Periophthalmus_magnuspinnatus
ENSPFOG00000011658	rbm38	92	55.932	ENSPCIG00000013648	RBM38	91	55.085	Phascolarctos_cinereus
ENSPFOG00000011658	rbm38	100	99.606	ENSPLAG00000005218	rbm38	100	99.606	Poecilia_latipinna
ENSPFOG00000011658	rbm38	98	60.385	ENSPLAG00000002500	-	100	61.024	Poecilia_latipinna
ENSPFOG00000011658	rbm38	100	99.606	ENSPMEG00000015770	rbm38	100	99.606	Poecilia_mexicana
ENSPFOG00000011658	rbm38	100	99.606	ENSPREG00000007398	rbm38	100	99.606	Poecilia_reticulata
ENSPFOG00000011658	rbm38	91	57.692	ENSPCOG00000026201	RBM38	77	90.426	Propithecus_coquereli
ENSPFOG00000011658	rbm38	72	40.217	ENSPVAG00000006457	RBM38	89	34.615	Pteropus_vampyrus
ENSPFOG00000011658	rbm38	100	85.433	ENSPNYG00000021373	rbm38	100	85.433	Pundamilia_nyererei
ENSPFOG00000011658	rbm38	98	60.700	ENSPNYG00000019727	-	100	81.197	Pundamilia_nyererei
ENSPFOG00000011658	rbm38	98	59.055	ENSPNAG00000015123	-	88	82.456	Pygocentrus_nattereri
ENSPFOG00000011658	rbm38	94	59.184	ENSPNAG00000010596	rbm38	98	58.506	Pygocentrus_nattereri
ENSPFOG00000011658	rbm38	91	58.974	ENSRNOG00000006420	Rbm38	89	55.696	Rattus_norvegicus
ENSPFOG00000011658	rbm38	92	50.847	ENSRROG00000036388	-	88	48.729	Rhinopithecus_roxellana
ENSPFOG00000011658	rbm38	91	56.838	ENSSBOG00000031053	RBM38	88	90.426	Saimiri_boliviensis_boliviensis
ENSPFOG00000011658	rbm38	98	57.143	ENSSFOG00015004453	rbm38	100	53.516	Scleropages_formosus
ENSPFOG00000011658	rbm38	100	87.402	ENSSDUG00000022611	rbm38	100	87.402	Seriola_dumerili
ENSPFOG00000011658	rbm38	98	61.328	ENSSDUG00000021082	RBM38	100	59.843	Seriola_dumerili
ENSPFOG00000011658	rbm38	98	61.328	ENSSLDG00000011778	RBM38	100	59.449	Seriola_lalandi_dorsalis
ENSPFOG00000011658	rbm38	100	87.402	ENSSLDG00000010845	rbm38	100	87.402	Seriola_lalandi_dorsalis
ENSPFOG00000011658	rbm38	100	89.764	ENSSPAG00000011113	rbm38	100	89.764	Stegastes_partitus
ENSPFOG00000011658	rbm38	98	60.784	ENSSPAG00000020989	RBM38	100	59.843	Stegastes_partitus
ENSPFOG00000011658	rbm38	91	57.692	ENSSSCG00000007504	RBM38	89	55.556	Sus_scrofa
ENSPFOG00000011658	rbm38	98	59.449	ENSTRUG00000019869	-	100	59.449	Takifugu_rubripes
ENSPFOG00000011658	rbm38	100	79.134	ENSTRUG00000024954	rbm38	100	75.591	Takifugu_rubripes
ENSPFOG00000011658	rbm38	94	60.166	ENSTNIG00000007093	-	100	58.091	Tetraodon_nigroviridis
ENSPFOG00000011658	rbm38	74	64.021	ENSUAMG00000019780	RBM38	89	55.128	Ursus_americanus
ENSPFOG00000011658	rbm38	91	57.692	ENSVVUG00000017246	RBM38	89	56.838	Vulpes_vulpes
ENSPFOG00000011658	rbm38	76	62.887	ENSXETG00000011268	rbm38	98	55.649	Xenopus_tropicalis
ENSPFOG00000011658	rbm38	83	53.540	ENSXCOG00000017324	-	62	75.000	Xiphophorus_couchianus
ENSPFOG00000011658	rbm38	100	97.638	ENSXMAG00000023662	rbm38	100	97.638	Xiphophorus_maculatus