EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPFOG00000011802 (Gene tree)
Gene ID: 103131225
Gene Symbol: snrpb
Alias: -
Full Name: small nuclear ribonucleoprotein polypeptides B and B1
Gene Type: protein_coding
Species: Poecilia_formosa
Status: putative
Strand: Minus strand
Length: 2496 bases
Position: chrKI520340.1:33823-36318
Accession: ZDB-GENE-040426-1819
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPFOP00000011845	LSM	PF01423.22	5.9e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPFOT00000011862	-	711	-	ENSPFOP00000011845	236 (aa)	-	A0A087Y1E2

Gene Model

Click here to download ENSPFOG00000011802's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000011802's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPFOG00000011802	snrpb	63	95.973	ENSG00000125835	SNRPB	73	98.039	Homo_sapiens
ENSPFOG00000011802	snrpb	63	100.000	ENSAPOG00000019606	snrpb	51	100.000	Acanthochromis_polyacanthus
ENSPFOG00000011802	snrpb	61	100.000	ENSACIG00000014480	snrpb	64	100.000	Amphilophus_citrinellus
ENSPFOG00000011802	snrpb	63	100.000	ENSAOCG00000006876	snrpb	62	100.000	Amphiprion_ocellaris
ENSPFOG00000011802	snrpb	63	100.000	ENSAPEG00000021585	snrpb	64	100.000	Amphiprion_percula
ENSPFOG00000011802	snrpb	63	100.000	ENSATEG00000009836	snrpb	62	100.000	Anabas_testudineus
ENSPFOG00000011802	snrpb	63	88.591	ENSANAG00000036271	-	79	76.923	Aotus_nancymaae
ENSPFOG00000011802	snrpb	63	100.000	ENSACLG00000014707	snrpb	62	100.000	Astatotilapia_calliptera
ENSPFOG00000011802	snrpb	63	95.973	ENSBTAG00000001038	SNRPB	62	95.973	Bos_taurus
ENSPFOG00000011802	snrpb	88	77.209	ENSCJAG00000023097	-	62	91.275	Callithrix_jacchus
ENSPFOG00000011802	snrpb	61	83.673	ENSCAFG00000031109	-	63	82.895	Canis_familiaris
ENSPFOG00000011802	snrpb	65	75.163	ENSTSYG00000032303	-	54	77.551	Carlito_syrichta
ENSPFOG00000011802	snrpb	54	83.465	ENSCCAG00000035140	-	89	84.314	Cebus_capucinus
ENSPFOG00000011802	snrpb	63	95.973	ENSCANG00000019461	SNRPB	65	94.340	Colobus_angolensis_palliatus
ENSPFOG00000011802	snrpb	63	95.973	ENSCGRG00001023046	Snrpb	83	79.703	Cricetulus_griseus_chok1gshd
ENSPFOG00000011802	snrpb	61	95.862	ENSCGRG00000010423	Snrpb	56	95.862	Cricetulus_griseus_crigri
ENSPFOG00000011802	snrpb	98	80.534	ENSCSEG00000020328	snrpb	99	80.534	Cynoglossus_semilaevis
ENSPFOG00000011802	snrpb	63	98.658	ENSDARG00000011125	snrpb	62	98.658	Danio_rerio
ENSPFOG00000011802	snrpb	66	67.308	FBgn0262601	SmB	73	68.919	Drosophila_melanogaster
ENSPFOG00000011802	snrpb	63	72.483	ENSETEG00000006830	SNRPB	86	65.128	Echinops_telfairi
ENSPFOG00000011802	snrpb	66	85.256	ENSEBUG00000007467	SNRPB	62	87.838	Eptatretus_burgeri
ENSPFOG00000011802	snrpb	63	95.973	ENSEEUG00000015568	SNRPB	69	83.077	Erinaceus_europaeus
ENSPFOG00000011802	snrpb	61	100.000	ENSELUG00000014564	snrpb	64	100.000	Esox_lucius
ENSPFOG00000011802	snrpb	60	97.887	ENSFALG00000004866	SNRPB	61	97.887	Ficedula_albicollis
ENSPFOG00000011802	snrpb	63	97.987	ENSGALG00000035421	SNRPN	62	97.987	Gallus_gallus
ENSPFOG00000011802	snrpb	64	99.333	ENSGAFG00000019558	snrpb	66	99.333	Gambusia_affinis
ENSPFOG00000011802	snrpb	63	100.000	ENSGACG00000003262	snrpb	63	100.000	Gasterosteus_aculeatus
ENSPFOG00000011802	snrpb	63	100.000	ENSHBUG00000008369	snrpb	62	100.000	Haplochromis_burtoni
ENSPFOG00000011802	snrpb	63	86.486	ENSHGLG00000016505	-	71	86.486	Heterocephalus_glaber_female
ENSPFOG00000011802	snrpb	63	86.486	ENSHGLG00100004178	-	71	86.486	Heterocephalus_glaber_male
ENSPFOG00000011802	snrpb	63	100.000	ENSHCOG00000014888	snrpb	63	100.000	Hippocampus_comes
ENSPFOG00000011802	snrpb	58	94.853	ENSSTOG00000027821	-	62	94.853	Ictidomys_tridecemlineatus
ENSPFOG00000011802	snrpb	63	99.329	ENSKMAG00000014494	snrpb	61	99.329	Kryptolebias_marmoratus
ENSPFOG00000011802	snrpb	63	100.000	ENSLBEG00000005678	snrpb	63	100.000	Labrus_bergylta
ENSPFOG00000011802	snrpb	63	97.315	ENSLACG00000011459	SNRPB	62	97.315	Latimeria_chalumnae
ENSPFOG00000011802	snrpb	63	95.973	ENSMMUG00000010050	SNRPB	61	93.960	Macaca_mulatta
ENSPFOG00000011802	snrpb	64	100.000	ENSMAMG00000009294	snrpb	61	100.000	Mastacembelus_armatus
ENSPFOG00000011802	snrpb	63	100.000	ENSMZEG00005011856	snrpb	62	100.000	Maylandia_zebra
ENSPFOG00000011802	snrpb	63	85.906	ENSMICG00000015983	-	68	85.906	Microcebus_murinus
ENSPFOG00000011802	snrpb	64	100.000	ENSMMOG00000013226	snrpb	64	100.000	Mola_mola
ENSPFOG00000011802	snrpb	63	99.329	ENSMALG00000020839	snrpb	50	99.329	Monopterus_albus
ENSPFOG00000011802	snrpb	63	95.973	MGP_CAROLIEiJ_G0024293	Snrpb	73	98.039	Mus_caroli
ENSPFOG00000011802	snrpb	63	95.973	ENSMUSG00000027404	Snrpb	73	98.039	Mus_musculus
ENSPFOG00000011802	snrpb	63	95.973	MGP_PahariEiJ_G0025738	Snrpb	73	98.039	Mus_pahari
ENSPFOG00000011802	snrpb	63	95.973	MGP_SPRETEiJ_G0025213	Snrpb	72	98.039	Mus_spretus
ENSPFOG00000011802	snrpb	62	98.630	ENSNBRG00000006353	snrpb	56	98.630	Neolamprologus_brichardi
ENSPFOG00000011802	snrpb	63	95.973	ENSMEUG00000015625	SNRPB	87	82.564	Notamacropus_eugenii
ENSPFOG00000011802	snrpb	63	100.000	ENSONIG00000000248	snrpb	62	100.000	Oreochromis_niloticus
ENSPFOG00000011802	snrpb	63	91.946	ENSOCUG00000022423	-	76	91.946	Oryctolagus_cuniculus
ENSPFOG00000011802	snrpb	88	56.444	ENSOCUG00000026813	-	64	66.667	Oryctolagus_cuniculus
ENSPFOG00000011802	snrpb	85	83.085	ENSORLG00000021862	snrpb	62	100.000	Oryzias_latipes
ENSPFOG00000011802	snrpb	61	97.917	ENSPMGG00000016349	snrpb	62	97.931	Periophthalmus_magnuspinnatus
ENSPFOG00000011802	snrpb	73	88.439	ENSPLAG00000014130	snrpb	75	88.439	Poecilia_latipinna
ENSPFOG00000011802	snrpb	72	85.882	ENSPREG00000015515	snrpb	73	87.283	Poecilia_reticulata
ENSPFOG00000011802	snrpb	63	94.631	ENSPVAG00000017013	SNRPB	68	82.051	Pteropus_vampyrus
ENSPFOG00000011802	snrpb	63	100.000	ENSPNYG00000014788	snrpb	62	100.000	Pundamilia_nyererei
ENSPFOG00000011802	snrpb	63	95.973	ENSRNOG00000006961	Snrpb	72	98.039	Rattus_norvegicus
ENSPFOG00000011802	snrpb	63	95.973	ENSRBIG00000040505	SNRPB	65	95.973	Rhinopithecus_bieti
ENSPFOG00000011802	snrpb	63	97.987	ENSSFOG00015002870	snrpb	88	79.904	Scleropages_formosus
ENSPFOG00000011802	snrpb	63	100.000	ENSSMAG00000006766	snrpb	63	100.000	Scophthalmus_maximus
ENSPFOG00000011802	snrpb	63	100.000	ENSSDUG00000018539	snrpb	62	100.000	Seriola_dumerili
ENSPFOG00000011802	snrpb	63	100.000	ENSSLDG00000022391	snrpb	62	100.000	Seriola_lalandi_dorsalis
ENSPFOG00000011802	snrpb	63	78.523	ENSSARG00000003084	SNRPB	83	69.744	Sorex_araneus
ENSPFOG00000011802	snrpb	63	100.000	ENSSPAG00000021992	snrpb	62	100.000	Stegastes_partitus
ENSPFOG00000011802	snrpb	63	72.483	ENSSSCG00000011966	-	60	70.470	Sus_scrofa
ENSPFOG00000011802	snrpb	59	97.143	ENSTGUG00000005684	SNRPB	59	97.143	Taeniopygia_guttata
ENSPFOG00000011802	snrpb	62	100.000	ENSTRUG00000023094	snrpb	65	100.000	Takifugu_rubripes
ENSPFOG00000011802	snrpb	62	100.000	ENSTNIG00000002991	snrpb	63	100.000	Tetraodon_nigroviridis
ENSPFOG00000011802	snrpb	63	95.973	ENSUAMG00000005984	-	71	95.973	Ursus_americanus
ENSPFOG00000011802	snrpb	58	94.891	ENSUMAG00000002123	-	63	94.891	Ursus_maritimus
ENSPFOG00000011802	snrpb	96	66.953	ENSVVUG00000010086	-	95	62.963	Vulpes_vulpes
ENSPFOG00000011802	snrpb	63	97.987	ENSXETG00000027266	snrpb	63	97.987	Xenopus_tropicalis
ENSPFOG00000011802	snrpb	73	85.549	ENSXMAG00000028767	snrpb	74	85.549	Xiphophorus_maculatus