EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPFOG00000012164 (Gene tree)
Gene ID: -
Gene Symbol: si:ch211-153b23.4
Alias: -
Full Name: si:ch211-153b23.4
Gene Type: protein_coding
Species: Poecilia_formosa
Status: putative
Strand: Minus strand
Length: 47933 bases
Position: chrKI519636.1:2792934-2840866
Accession: ZDB-GENE-030131-7332
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPFOP00000012202	Sua5_yciO_yrdC	PF01300.18	6.2e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPFOT00000012219	-	2228	-	ENSPFOP00000012202	711 (aa)	-	A0A087Y2E9

Gene Model

Click here to download ENSPFOG00000012164's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000012164's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPFOG00000012164	si:ch211-153b23.4	73	33.962	ENSPFOG00000012289	si:ch211-153b23.3	74	30.677

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPFOG00000012164	si:ch211-153b23.4	95	85.398	ENSAPOG00000006178	si:ch211-153b23.4	79	85.147	Acanthochromis_polyacanthus
ENSPFOG00000012164	si:ch211-153b23.4	95	85.398	ENSAPOG00000006144	si:ch211-153b23.4	79	85.147	Acanthochromis_polyacanthus
ENSPFOG00000012164	si:ch211-153b23.4	82	47.059	ENSACIG00000006968	si:ch211-153b23.3	72	47.059	Amphilophus_citrinellus
ENSPFOG00000012164	si:ch211-153b23.4	95	85.147	ENSACIG00000006997	si:ch211-153b23.4	80	85.147	Amphilophus_citrinellus
ENSPFOG00000012164	si:ch211-153b23.4	93	81.818	ENSAOCG00000010999	si:ch211-153b23.4	80	81.571	Amphiprion_ocellaris
ENSPFOG00000012164	si:ch211-153b23.4	95	82.596	ENSAPEG00000014665	si:ch211-153b23.4	80	82.353	Amphiprion_percula
ENSPFOG00000012164	si:ch211-153b23.4	95	83.971	ENSATEG00000004948	si:ch211-153b23.4	77	83.971	Anabas_testudineus
ENSPFOG00000012164	si:ch211-153b23.4	96	62.300	ENSAPLG00000013596	-	83	62.300	Anas_platyrhynchos
ENSPFOG00000012164	si:ch211-153b23.4	95	82.743	ENSACLG00000005471	si:ch211-153b23.4	77	82.743	Astatotilapia_calliptera
ENSPFOG00000012164	si:ch211-153b23.4	95	74.487	ENSAMXG00000013879	si:ch211-153b23.4	80	74.487	Astyanax_mexicanus
ENSPFOG00000012164	si:ch211-153b23.4	91	30.769	ENSAMXG00000038564	si:ch211-153b23.3	74	30.712	Astyanax_mexicanus
ENSPFOG00000012164	si:ch211-153b23.4	72	32.030	ENSCSEG00000014853	si:ch211-153b23.3	58	32.030	Cynoglossus_semilaevis
ENSPFOG00000012164	si:ch211-153b23.4	95	80.769	ENSCSEG00000014838	si:ch211-153b23.4	80	80.769	Cynoglossus_semilaevis
ENSPFOG00000012164	si:ch211-153b23.4	95	91.777	ENSCVAG00000021145	si:ch211-153b23.4	84	91.777	Cyprinodon_variegatus
ENSPFOG00000012164	si:ch211-153b23.4	91	31.231	ENSDARG00000104919	si:ch211-153b23.3	74	31.231	Danio_rerio
ENSPFOG00000012164	si:ch211-153b23.4	99	69.701	ENSDARG00000077169	si:ch211-153b23.4	80	69.701	Danio_rerio
ENSPFOG00000012164	si:ch211-153b23.4	95	71.784	ENSELUG00000004961	si:ch211-153b23.4	77	71.784	Esox_lucius
ENSPFOG00000012164	si:ch211-153b23.4	95	60.651	ENSFALG00000011343	-	77	60.651	Ficedula_albicollis
ENSPFOG00000012164	si:ch211-153b23.4	52	38.889	ENSFALG00000011333	-	99	38.624	Ficedula_albicollis
ENSPFOG00000012164	si:ch211-153b23.4	78	95.477	ENSFHEG00000009888	si:ch211-153b23.4	62	95.477	Fundulus_heteroclitus
ENSPFOG00000012164	si:ch211-153b23.4	94	90.923	ENSFHEG00000010001	si:ch211-153b23.4	84	90.923	Fundulus_heteroclitus
ENSPFOG00000012164	si:ch211-153b23.4	88	96.172	ENSGAFG00000007442	si:ch211-153b23.4	75	96.172	Gambusia_affinis
ENSPFOG00000012164	si:ch211-153b23.4	91	31.278	ENSGAFG00000007455	si:ch211-153b23.3	74	31.278	Gambusia_affinis
ENSPFOG00000012164	si:ch211-153b23.4	95	83.333	ENSGACG00000018253	si:ch211-153b23.4	80	83.333	Gasterosteus_aculeatus
ENSPFOG00000012164	si:ch211-153b23.4	95	64.223	ENSGAGG00000024601	-	91	64.223	Gopherus_agassizii
ENSPFOG00000012164	si:ch211-153b23.4	91	81.424	ENSHBUG00000000013	si:ch211-153b23.4	86	81.424	Haplochromis_burtoni
ENSPFOG00000012164	si:ch211-153b23.4	73	33.209	ENSHBUG00000001760	si:ch211-153b23.3	59	32.772	Haplochromis_burtoni
ENSPFOG00000012164	si:ch211-153b23.4	95	72.434	ENSIPUG00000015205	si:ch211-153b23.4	81	72.434	Ictalurus_punctatus
ENSPFOG00000012164	si:ch211-153b23.4	95	87.611	ENSKMAG00000006919	-	77	87.611	Kryptolebias_marmoratus
ENSPFOG00000012164	si:ch211-153b23.4	91	30.655	ENSKMAG00000006792	si:ch211-153b23.3	74	30.655	Kryptolebias_marmoratus
ENSPFOG00000012164	si:ch211-153b23.4	93	87.801	ENSKMAG00000006829	si:ch211-153b23.4	82	87.801	Kryptolebias_marmoratus
ENSPFOG00000012164	si:ch211-153b23.4	95	83.628	ENSLBEG00000026309	si:ch211-153b23.4	78	83.382	Labrus_bergylta
ENSPFOG00000012164	si:ch211-153b23.4	100	64.017	ENSLACG00000017592	si:ch211-153b23.4	85	64.017	Latimeria_chalumnae
ENSPFOG00000012164	si:ch211-153b23.4	91	30.253	ENSLACG00000005800	-	79	30.253	Latimeria_chalumnae
ENSPFOG00000012164	si:ch211-153b23.4	95	85.735	ENSMAMG00000009358	si:ch211-153b23.4	83	85.735	Mastacembelus_armatus
ENSPFOG00000012164	si:ch211-153b23.4	73	32.096	ENSMAMG00000009328	si:ch211-153b23.3	58	32.096	Mastacembelus_armatus
ENSPFOG00000012164	si:ch211-153b23.4	95	86.324	ENSMAMG00000009277	si:ch211-153b23.4	82	86.324	Mastacembelus_armatus
ENSPFOG00000012164	si:ch211-153b23.4	95	82.301	ENSMZEG00005011433	si:ch211-153b23.4	82	82.301	Maylandia_zebra
ENSPFOG00000012164	si:ch211-153b23.4	96	62.190	ENSMGAG00000005478	-	83	62.190	Meleagris_gallopavo
ENSPFOG00000012164	si:ch211-153b23.4	52	38.624	ENSMGAG00000005489	-	99	39.362	Meleagris_gallopavo
ENSPFOG00000012164	si:ch211-153b23.4	95	82.153	ENSMMOG00000004425	si:ch211-153b23.4	84	82.153	Mola_mola
ENSPFOG00000012164	si:ch211-153b23.4	93	81.982	ENSNBRG00000013392	si:ch211-153b23.4	83	81.982	Neolamprologus_brichardi
ENSPFOG00000012164	si:ch211-153b23.4	95	82.891	ENSONIG00000017875	si:ch211-153b23.4	77	82.891	Oreochromis_niloticus
ENSPFOG00000012164	si:ch211-153b23.4	91	30.678	ENSORLG00000006161	si:ch211-153b23.3	76	30.531	Oryzias_latipes
ENSPFOG00000012164	si:ch211-153b23.4	95	82.794	ENSORLG00000006169	si:ch211-153b23.4	77	82.794	Oryzias_latipes
ENSPFOG00000012164	si:ch211-153b23.4	95	83.529	ENSORLG00020009905	si:ch211-153b23.4	77	83.529	Oryzias_latipes_hni
ENSPFOG00000012164	si:ch211-153b23.4	95	83.088	ENSORLG00015003709	si:ch211-153b23.4	77	83.088	Oryzias_latipes_hsok
ENSPFOG00000012164	si:ch211-153b23.4	95	82.206	ENSOMEG00000007682	si:ch211-153b23.4	77	82.206	Oryzias_melastigma
ENSPFOG00000012164	si:ch211-153b23.4	96	68.768	ENSPKIG00000014429	si:ch211-153b23.4	81	68.768	Paramormyrops_kingsleyae
ENSPFOG00000012164	si:ch211-153b23.4	95	74.047	ENSPKIG00000025681	si:ch211-153b23.4	79	74.047	Paramormyrops_kingsleyae
ENSPFOG00000012164	si:ch211-153b23.4	95	65.786	ENSPMGG00000001313	si:ch211-153b23.4	76	66.079	Periophthalmus_magnuspinnatus
ENSPFOG00000012164	si:ch211-153b23.4	95	98.222	ENSPLAG00000016295	si:ch211-153b23.4	84	98.222	Poecilia_latipinna
ENSPFOG00000012164	si:ch211-153b23.4	90	30.435	ENSPLAG00000016320	si:ch211-153b23.3	74	30.435	Poecilia_latipinna
ENSPFOG00000012164	si:ch211-153b23.4	91	30.792	ENSPMEG00000008884	si:ch211-153b23.3	74	30.792	Poecilia_mexicana
ENSPFOG00000012164	si:ch211-153b23.4	93	96.067	ENSPMEG00000007538	si:ch211-153b23.4	80	96.067	Poecilia_mexicana
ENSPFOG00000012164	si:ch211-153b23.4	95	82.301	ENSPNYG00000000250	si:ch211-153b23.4	82	82.301	Pundamilia_nyererei
ENSPFOG00000012164	si:ch211-153b23.4	99	73.759	ENSPNAG00000019554	si:ch211-153b23.4	79	73.759	Pygocentrus_nattereri
ENSPFOG00000012164	si:ch211-153b23.4	95	74.779	ENSSFOG00015010891	si:ch211-153b23.4	78	74.779	Scleropages_formosus
ENSPFOG00000012164	si:ch211-153b23.4	96	70.130	ENSSFOG00015003920	-	78	70.130	Scleropages_formosus
ENSPFOG00000012164	si:ch211-153b23.4	58	36.277	ENSSFOG00015009030	-	65	36.038	Scleropages_formosus
ENSPFOG00000012164	si:ch211-153b23.4	95	82.500	ENSSMAG00000010067	si:ch211-153b23.4	78	82.500	Scophthalmus_maximus
ENSPFOG00000012164	si:ch211-153b23.4	77	83.818	ENSSDUG00000006931	si:ch211-153b23.4	75	83.818	Seriola_dumerili
ENSPFOG00000012164	si:ch211-153b23.4	79	84.211	ENSSDUG00000006842	si:ch211-153b23.4	70	82.331	Seriola_dumerili
ENSPFOG00000012164	si:ch211-153b23.4	95	84.412	ENSSDUG00000006671	si:ch211-153b23.4	84	84.412	Seriola_dumerili
ENSPFOG00000012164	si:ch211-153b23.4	62	34.783	ENSSLDG00000008629	si:ch211-153b23.3	52	34.783	Seriola_lalandi_dorsalis
ENSPFOG00000012164	si:ch211-153b23.4	95	62.334	ENSTGUG00000005499	-	83	62.334	Taeniopygia_guttata
ENSPFOG00000012164	si:ch211-153b23.4	95	79.823	ENSTRUG00000003247	si:ch211-153b23.4	84	79.823	Takifugu_rubripes
ENSPFOG00000012164	si:ch211-153b23.4	95	78.792	ENSTNIG00000008958	si:ch211-153b23.4	81	78.792	Tetraodon_nigroviridis
ENSPFOG00000012164	si:ch211-153b23.4	100	59.218	ENSXETG00000004489	-	78	59.218	Xenopus_tropicalis
ENSPFOG00000012164	si:ch211-153b23.4	95	95.742	ENSXMAG00000021388	si:ch211-153b23.4	82	95.742	Xiphophorus_maculatus
ENSPFOG00000012164	si:ch211-153b23.4	91	30.667	ENSXMAG00000029318	si:ch211-153b23.3	74	30.667	Xiphophorus_maculatus
ENSPFOG00000012164	si:ch211-153b23.4	95	96.916	ENSXMAG00000009416	-	80	96.916	Xiphophorus_maculatus