EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPFOG00000012216 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Poecilia_formosa
Status: putative
Strand: Plus strand
Length: 2657 bases
Position: chrKI519641.1:3407877-3410533
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPFOP00000012192	MMR_HSR1	PF01926.23	8.4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPFOT00000012209	-	642	-	ENSPFOP00000012192	213 (aa)	-	A0A087Y2D9

Gene Model

Click here to download ENSPFOG00000012216's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000012216's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPFOG00000012216	-	79	49.405	ENSPFOG00000012632	-	92	49.405
ENSPFOG00000012216	-	80	42.614	ENSPFOG00000020164	arl4aa	88	42.614
ENSPFOG00000012216	-	83	54.749	ENSPFOG00000020069	arl14	89	54.749
ENSPFOG00000012216	-	64	35.664	ENSPFOG00000016361	arl8ba	76	35.664
ENSPFOG00000012216	-	77	36.994	ENSPFOG00000003764	arfrp1	85	36.994
ENSPFOG00000012216	-	86	39.891	ENSPFOG00000019829	-	93	39.891
ENSPFOG00000012216	-	75	35.000	ENSPFOG00000006540	-	83	35.000
ENSPFOG00000012216	-	60	37.795	ENSPFOG00000022194	-	63	37.795
ENSPFOG00000012216	-	64	35.664	ENSPFOG00000003916	arl8bb	76	35.664
ENSPFOG00000012216	-	76	43.827	ENSPFOG00000012486	arl3	87	43.827
ENSPFOG00000012216	-	75	48.750	ENSPFOG00000017992	-	87	48.750
ENSPFOG00000012216	-	79	47.337	ENSPFOG00000014787	-	92	47.337
ENSPFOG00000012216	-	76	36.420	ENSPFOG00000016633	arl8	88	36.420
ENSPFOG00000012216	-	76	43.827	ENSPFOG00000012426	arl3	83	43.827
ENSPFOG00000012216	-	77	42.262	ENSPFOG00000020283	arl4cb	87	42.262
ENSPFOG00000012216	-	75	49.686	ENSPFOG00000015817	arf5	87	49.686
ENSPFOG00000012216	-	75	33.918	ENSPFOG00000005666	sar1b	85	33.918
ENSPFOG00000012216	-	82	46.552	ENSPFOG00000006232	arl11	98	46.552
ENSPFOG00000012216	-	77	45.181	ENSPFOG00000020447	arl4d	83	45.181
ENSPFOG00000012216	-	79	48.810	ENSPFOG00000001778	arf3b	91	48.810
ENSPFOG00000012216	-	74	38.889	ENSPFOG00000008534	ARL6	83	38.889
ENSPFOG00000012216	-	79	48.810	ENSPFOG00000006492	-	73	48.810
ENSPFOG00000012216	-	60	37.008	ENSPFOG00000023432	sar1ab	63	37.008
ENSPFOG00000012216	-	85	47.222	ENSPFOG00000013339	arf2b	98	47.222
ENSPFOG00000012216	-	75	41.250	ENSPFOG00000005789	arl3l2	84	41.250
ENSPFOG00000012216	-	78	40.120	ENSPFOG00000003241	arl1	91	40.120
ENSPFOG00000012216	-	80	37.647	ENSPFOG00000007842	arl5c	91	37.647
ENSPFOG00000012216	-	66	33.803	ENSPFOG00000012465	arl8a	75	34.965
ENSPFOG00000012216	-	75	43.478	ENSPFOG00000001643	arl2	85	43.478

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPFOG00000012216	-	83	55.191	ENSACIG00000013244	arl14	89	55.191	Amphilophus_citrinellus
ENSPFOG00000012216	-	83	53.333	ENSACLG00000026984	arl14	89	53.333	Astatotilapia_calliptera
ENSPFOG00000012216	-	97	77.778	ENSACLG00000015415	-	100	77.778	Astatotilapia_calliptera
ENSPFOG00000012216	-	95	70.936	ENSCSEG00000017926	-	99	70.936	Cynoglossus_semilaevis
ENSPFOG00000012216	-	88	53.846	ENSDARG00000063223	arl14	97	53.846	Danio_rerio
ENSPFOG00000012216	-	87	68.817	ENSELUG00000024060	-	66	68.817	Esox_lucius
ENSPFOG00000012216	-	87	52.632	ENSFHEG00000018721	arl14	94	52.632	Fundulus_heteroclitus
ENSPFOG00000012216	-	78	55.621	ENSGMOG00000020214	arl14	100	55.621	Gadus_morhua
ENSPFOG00000012216	-	92	93.333	ENSGAFG00000012819	-	99	93.333	Gambusia_affinis
ENSPFOG00000012216	-	86	78.689	ENSGACG00000010096	-	100	78.689	Gasterosteus_aculeatus
ENSPFOG00000012216	-	79	58.580	ENSGACG00000013840	arl14	93	58.580	Gasterosteus_aculeatus
ENSPFOG00000012216	-	83	53.333	ENSHBUG00000001159	arl14	89	53.333	Haplochromis_burtoni
ENSPFOG00000012216	-	87	49.738	ENSHCOG00000009562	arl14	90	49.738	Hippocampus_comes
ENSPFOG00000012216	-	89	55.208	ENSKMAG00000010409	arl14	96	55.208	Kryptolebias_marmoratus
ENSPFOG00000012216	-	97	76.329	ENSKMAG00000020389	-	100	76.329	Kryptolebias_marmoratus
ENSPFOG00000012216	-	82	55.367	ENSLBEG00000021116	arl14	83	55.367	Labrus_bergylta
ENSPFOG00000012216	-	97	77.670	ENSMAMG00000012474	-	99	77.670	Mastacembelus_armatus
ENSPFOG00000012216	-	83	56.983	ENSMAMG00000011773	arl14	89	56.983	Mastacembelus_armatus
ENSPFOG00000012216	-	83	53.333	ENSMZEG00005025506	arl14	89	53.333	Maylandia_zebra
ENSPFOG00000012216	-	97	77.778	ENSMZEG00005000218	-	100	77.778	Maylandia_zebra
ENSPFOG00000012216	-	82	54.802	ENSONIG00000009954	arl14	85	54.802	Oreochromis_niloticus
ENSPFOG00000012216	-	97	78.261	ENSONIG00000003641	-	88	78.261	Oreochromis_niloticus
ENSPFOG00000012216	-	85	50.543	ENSORLG00000027330	arl14	99	50.543	Oryzias_latipes
ENSPFOG00000012216	-	85	50.543	ENSORLG00020014120	arl14	99	50.543	Oryzias_latipes_hni
ENSPFOG00000012216	-	85	50.543	ENSORLG00015014176	arl14	99	50.543	Oryzias_latipes_hsok
ENSPFOG00000012216	-	75	54.938	ENSOMEG00000016904	arl14	89	54.938	Oryzias_melastigma
ENSPFOG00000012216	-	78	56.805	ENSPLAG00000017362	arl14	96	56.805	Poecilia_latipinna
ENSPFOG00000012216	-	97	98.068	ENSPMEG00000008427	-	100	98.068	Poecilia_mexicana
ENSPFOG00000012216	-	97	95.652	ENSPREG00000001895	-	100	95.652	Poecilia_reticulata
ENSPFOG00000012216	-	83	55.866	ENSPREG00000001976	arl14	88	55.866	Poecilia_reticulata
ENSPFOG00000012216	-	87	79.570	ENSPNYG00000006844	-	97	79.570	Pundamilia_nyererei
ENSPFOG00000012216	-	97	79.612	ENSSMAG00000012843	-	99	79.612	Scophthalmus_maximus
ENSPFOG00000012216	-	53	75.000	ENSSDUG00000023723	-	100	75.000	Seriola_dumerili
ENSPFOG00000012216	-	97	77.184	ENSSLDG00000006512	-	99	77.184	Seriola_lalandi_dorsalis
ENSPFOG00000012216	-	83	55.866	ENSSPAG00000014539	arl14	87	55.866	Stegastes_partitus
ENSPFOG00000012216	-	97	81.643	ENSSPAG00000014422	-	100	81.643	Stegastes_partitus
ENSPFOG00000012216	-	83	55.866	ENSTNIG00000015242	-	92	55.866	Tetraodon_nigroviridis
ENSPFOG00000012216	-	97	93.689	ENSXMAG00000021386	-	99	93.689	Xiphophorus_maculatus