EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPFOG00000012289 (Gene tree)
Gene ID: 103135614
Gene Symbol: si:ch211-153b23.3
Alias: -
Full Name: uncharacterized LOC103135614
Gene Type: protein_coding
Species: Poecilia_formosa
Status: putative
Strand: Plus strand
Length: 3742 bases
Position: chrKI519636.1:2819241-2822982
Accession: 103135614
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPFOP00000012299	Sua5_yciO_yrdC	PF01300.18	5.7e-34	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPFOT00000012316	-	2862	XM_007548428	ENSPFOP00000012299	888 (aa)	XP_007548490	A0A087Y2P6

Gene Model

Click here to download ENSPFOG00000012289's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000012289's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPFOG00000012289	si:ch211-153b23.3	74	30.677	ENSPFOG00000012164	si:ch211-153b23.4	73	33.962

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPFOG00000012289	si:ch211-153b23.3	59	32.775	ENSAPOG00000006144	si:ch211-153b23.4	60	32.775	Acanthochromis_polyacanthus
ENSPFOG00000012289	si:ch211-153b23.3	59	32.775	ENSAPOG00000006178	si:ch211-153b23.4	59	32.775	Acanthochromis_polyacanthus
ENSPFOG00000012289	si:ch211-153b23.3	59	33.144	ENSACIG00000006997	si:ch211-153b23.4	60	33.144	Amphilophus_citrinellus
ENSPFOG00000012289	si:ch211-153b23.3	99	74.157	ENSACIG00000006968	si:ch211-153b23.3	100	74.157	Amphilophus_citrinellus
ENSPFOG00000012289	si:ch211-153b23.3	99	84.157	ENSAOCG00000010974	si:ch211-153b23.3	100	84.157	Amphiprion_ocellaris
ENSPFOG00000012289	si:ch211-153b23.3	59	32.762	ENSAPEG00000014665	si:ch211-153b23.4	60	32.762	Amphiprion_percula
ENSPFOG00000012289	si:ch211-153b23.3	99	83.820	ENSAPEG00000014700	si:ch211-153b23.3	100	83.820	Amphiprion_percula
ENSPFOG00000012289	si:ch211-153b23.3	99	79.775	ENSATEG00000004956	si:ch211-153b23.3	100	79.775	Anabas_testudineus
ENSPFOG00000012289	si:ch211-153b23.3	59	32.453	ENSATEG00000004948	si:ch211-153b23.4	59	32.453	Anabas_testudineus
ENSPFOG00000012289	si:ch211-153b23.3	59	33.837	ENSACLG00000005471	si:ch211-153b23.4	58	33.837	Astatotilapia_calliptera
ENSPFOG00000012289	si:ch211-153b23.3	99	79.842	ENSACLG00000005894	si:ch211-153b23.3	100	80.090	Astatotilapia_calliptera
ENSPFOG00000012289	si:ch211-153b23.3	59	34.023	ENSAMXG00000013879	si:ch211-153b23.4	61	34.023	Astyanax_mexicanus
ENSPFOG00000012289	si:ch211-153b23.3	99	71.029	ENSAMXG00000038564	si:ch211-153b23.3	99	71.251	Astyanax_mexicanus
ENSPFOG00000012289	si:ch211-153b23.3	99	78.716	ENSCSEG00000014853	si:ch211-153b23.3	100	78.716	Cynoglossus_semilaevis
ENSPFOG00000012289	si:ch211-153b23.3	99	91.299	ENSCVAG00000021124	si:ch211-153b23.3	100	91.299	Cyprinodon_variegatus
ENSPFOG00000012289	si:ch211-153b23.3	59	34.725	ENSCVAG00000021145	si:ch211-153b23.4	64	34.725	Cyprinodon_variegatus
ENSPFOG00000012289	si:ch211-153b23.3	100	71.605	ENSDARG00000104919	si:ch211-153b23.3	100	71.605	Danio_rerio
ENSPFOG00000012289	si:ch211-153b23.3	79	82.456	ENSELUG00000004912	si:ch211-153b23.3	100	82.456	Esox_lucius
ENSPFOG00000012289	si:ch211-153b23.3	59	32.252	ENSELUG00000004961	si:ch211-153b23.4	58	32.252	Esox_lucius
ENSPFOG00000012289	si:ch211-153b23.3	74	30.120	ENSFHEG00000010001	si:ch211-153b23.4	81	30.120	Fundulus_heteroclitus
ENSPFOG00000012289	si:ch211-153b23.3	100	91.554	ENSFHEG00000010030	si:ch211-153b23.3	100	91.554	Fundulus_heteroclitus
ENSPFOG00000012289	si:ch211-153b23.3	54	33.265	ENSGAFG00000007442	si:ch211-153b23.4	57	32.854	Gambusia_affinis
ENSPFOG00000012289	si:ch211-153b23.3	100	95.045	ENSGAFG00000007455	si:ch211-153b23.3	100	95.045	Gambusia_affinis
ENSPFOG00000012289	si:ch211-153b23.3	99	80.068	ENSHBUG00000001760	si:ch211-153b23.3	100	80.315	Haplochromis_burtoni
ENSPFOG00000012289	si:ch211-153b23.3	55	33.333	ENSHBUG00000000013	si:ch211-153b23.4	64	33.333	Haplochromis_burtoni
ENSPFOG00000012289	si:ch211-153b23.3	72	31.498	ENSIPUG00000015205	si:ch211-153b23.4	75	31.498	Ictalurus_punctatus
ENSPFOG00000012289	si:ch211-153b23.3	100	70.337	ENSIPUG00000015213	si:ch211-153b23.3	100	70.337	Ictalurus_punctatus
ENSPFOG00000012289	si:ch211-153b23.3	100	84.122	ENSKMAG00000006792	si:ch211-153b23.3	100	84.122	Kryptolebias_marmoratus
ENSPFOG00000012289	si:ch211-153b23.3	58	33.145	ENSKMAG00000006829	si:ch211-153b23.4	63	33.145	Kryptolebias_marmoratus
ENSPFOG00000012289	si:ch211-153b23.3	59	33.208	ENSKMAG00000006919	-	59	33.208	Kryptolebias_marmoratus
ENSPFOG00000012289	si:ch211-153b23.3	100	79.978	ENSLBEG00000026324	si:ch211-153b23.3	100	79.978	Labrus_bergylta
ENSPFOG00000012289	si:ch211-153b23.3	59	32.955	ENSLBEG00000026309	si:ch211-153b23.4	59	32.955	Labrus_bergylta
ENSPFOG00000012289	si:ch211-153b23.3	94	57.907	ENSLACG00000005800	-	99	58.383	Latimeria_chalumnae
ENSPFOG00000012289	si:ch211-153b23.3	54	35.892	ENSLACG00000017592	si:ch211-153b23.4	62	35.206	Latimeria_chalumnae
ENSPFOG00000012289	si:ch211-153b23.3	79	57.655	ENSLOCG00000015063	si:ch211-153b23.3	98	52.000	Lepisosteus_oculatus
ENSPFOG00000012289	si:ch211-153b23.3	99	81.890	ENSMAMG00000009328	si:ch211-153b23.3	100	81.890	Mastacembelus_armatus
ENSPFOG00000012289	si:ch211-153b23.3	59	32.955	ENSMAMG00000009358	si:ch211-153b23.4	63	32.955	Mastacembelus_armatus
ENSPFOG00000012289	si:ch211-153b23.3	59	33.144	ENSMAMG00000009277	si:ch211-153b23.4	62	33.144	Mastacembelus_armatus
ENSPFOG00000012289	si:ch211-153b23.3	59	33.648	ENSMZEG00005011433	si:ch211-153b23.4	63	33.648	Maylandia_zebra
ENSPFOG00000012289	si:ch211-153b23.3	99	79.955	ENSMZEG00005011450	si:ch211-153b23.3	100	80.202	Maylandia_zebra
ENSPFOG00000012289	si:ch211-153b23.3	99	80.022	ENSMMOG00000004436	si:ch211-153b23.3	99	80.022	Mola_mola
ENSPFOG00000012289	si:ch211-153b23.3	59	33.207	ENSMMOG00000004425	si:ch211-153b23.4	64	33.207	Mola_mola
ENSPFOG00000012289	si:ch211-153b23.3	99	80.180	ENSNBRG00000013370	si:ch211-153b23.3	100	80.427	Neolamprologus_brichardi
ENSPFOG00000012289	si:ch211-153b23.3	59	33.523	ENSNBRG00000013392	si:ch211-153b23.4	65	33.523	Neolamprologus_brichardi
ENSPFOG00000012289	si:ch211-153b23.3	59	33.648	ENSONIG00000017875	si:ch211-153b23.4	59	33.648	Oreochromis_niloticus
ENSPFOG00000012289	si:ch211-153b23.3	59	32.765	ENSORLG00000006169	si:ch211-153b23.4	59	32.765	Oryzias_latipes
ENSPFOG00000012289	si:ch211-153b23.3	99	81.327	ENSORLG00000006161	si:ch211-153b23.3	99	81.327	Oryzias_latipes
ENSPFOG00000012289	si:ch211-153b23.3	59	32.955	ENSORLG00020009905	si:ch211-153b23.4	59	32.955	Oryzias_latipes_hni
ENSPFOG00000012289	si:ch211-153b23.3	97	81.206	ENSORLG00020000910	si:ch211-153b23.3	100	81.206	Oryzias_latipes_hni
ENSPFOG00000012289	si:ch211-153b23.3	97	80.836	ENSORLG00015003698	si:ch211-153b23.3	100	80.836	Oryzias_latipes_hsok
ENSPFOG00000012289	si:ch211-153b23.3	59	33.144	ENSORLG00015003709	si:ch211-153b23.4	59	33.144	Oryzias_latipes_hsok
ENSPFOG00000012289	si:ch211-153b23.3	99	82.227	ENSOMEG00000007661	si:ch211-153b23.3	99	82.227	Oryzias_melastigma
ENSPFOG00000012289	si:ch211-153b23.3	67	32.172	ENSPKIG00000014429	si:ch211-153b23.4	69	32.172	Paramormyrops_kingsleyae
ENSPFOG00000012289	si:ch211-153b23.3	97	71.594	ENSPKIG00000022450	si:ch211-153b23.3	100	71.594	Paramormyrops_kingsleyae
ENSPFOG00000012289	si:ch211-153b23.3	99	50.276	ENSPKIG00000021029	-	99	50.276	Paramormyrops_kingsleyae
ENSPFOG00000012289	si:ch211-153b23.3	81	82.979	ENSPMGG00000001311	si:ch211-153b23.3	99	82.979	Periophthalmus_magnuspinnatus
ENSPFOG00000012289	si:ch211-153b23.3	74	30.920	ENSPLAG00000016295	si:ch211-153b23.4	80	30.920	Poecilia_latipinna
ENSPFOG00000012289	si:ch211-153b23.3	99	98.416	ENSPLAG00000016320	si:ch211-153b23.3	100	98.416	Poecilia_latipinna
ENSPFOG00000012289	si:ch211-153b23.3	100	98.423	ENSPMEG00000008884	si:ch211-153b23.3	100	98.423	Poecilia_mexicana
ENSPFOG00000012289	si:ch211-153b23.3	58	32.897	ENSPMEG00000007538	si:ch211-153b23.4	63	32.897	Poecilia_mexicana
ENSPFOG00000012289	si:ch211-153b23.3	99	79.842	ENSPNYG00000000251	si:ch211-153b23.3	100	80.090	Pundamilia_nyererei
ENSPFOG00000012289	si:ch211-153b23.3	59	33.648	ENSPNYG00000000250	si:ch211-153b23.4	63	33.648	Pundamilia_nyererei
ENSPFOG00000012289	si:ch211-153b23.3	59	33.459	ENSPNAG00000019554	si:ch211-153b23.4	58	33.459	Pygocentrus_nattereri
ENSPFOG00000012289	si:ch211-153b23.3	100	72.748	ENSPNAG00000019592	si:ch211-153b23.3	100	72.748	Pygocentrus_nattereri
ENSPFOG00000012289	si:ch211-153b23.3	100	73.012	ENSSFOG00015010910	si:ch211-153b23.3	100	73.012	Scleropages_formosus
ENSPFOG00000012289	si:ch211-153b23.3	59	32.458	ENSSFOG00015010891	si:ch211-153b23.4	60	32.270	Scleropages_formosus
ENSPFOG00000012289	si:ch211-153b23.3	68	51.846	ENSSFOG00015009030	-	96	51.846	Scleropages_formosus
ENSPFOG00000012289	si:ch211-153b23.3	99	82.712	ENSSMAG00000005446	si:ch211-153b23.3	100	82.712	Scophthalmus_maximus
ENSPFOG00000012289	si:ch211-153b23.3	59	32.514	ENSSDUG00000006671	si:ch211-153b23.4	64	32.514	Seriola_dumerili
ENSPFOG00000012289	si:ch211-153b23.3	99	83.034	ENSSLDG00000008629	si:ch211-153b23.3	100	83.034	Seriola_lalandi_dorsalis
ENSPFOG00000012289	si:ch211-153b23.3	99	76.364	ENSTRUG00000020530	si:ch211-153b23.3	100	76.705	Takifugu_rubripes
ENSPFOG00000012289	si:ch211-153b23.3	59	31.629	ENSTNIG00000008958	si:ch211-153b23.4	62	31.629	Tetraodon_nigroviridis
ENSPFOG00000012289	si:ch211-153b23.3	94	79.197	ENSTNIG00000008962	si:ch211-153b23.3	100	79.197	Tetraodon_nigroviridis
ENSPFOG00000012289	si:ch211-153b23.3	100	95.045	ENSXMAG00000029318	si:ch211-153b23.3	100	95.045	Xiphophorus_maculatus
ENSPFOG00000012289	si:ch211-153b23.3	59	34.026	ENSXMAG00000021388	si:ch211-153b23.4	62	34.026	Xiphophorus_maculatus
ENSPFOG00000012289	si:ch211-153b23.3	59	34.216	ENSXMAG00000009416	-	61	34.216	Xiphophorus_maculatus