EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPFOG00000012464 (Gene tree)
Gene ID: 103137563
Gene Symbol: chd3
Alias: -
Full Name: chromodomain-helicase-DNA-binding protein 3
Gene Type: protein_coding
Species: Poecilia_formosa
Status: putative
Strand: Minus strand
Length: 39307 bases
Position: chrKI519651.1:2693078-2732384
Accession: 103137563
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPFOP00000012650	ResIII	PF04851.15	2.4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPFOT00000012667	-	6841	XM_007551358	ENSPFOP00000012650	2129 (aa)	XP_007551420	A0A087Y3P7

Gene Model

Click here to download ENSPFOG00000012464's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000012464's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPFOG00000012464	chd3	88	62.494	ENSPFOG00000013889	-	97	64.222
ENSPFOG00000012464	chd3	80	68.725	ENSPFOG00000016981	-	95	67.148
ENSPFOG00000012464	chd3	85	67.134	ENSPFOG00000009089	chd4a	93	65.462

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPFOG00000012464	chd3	87	80.135	ENSG00000170004	CHD3	91	80.272	Homo_sapiens
ENSPFOG00000012464	chd3	75	90.623	ENSAPOG00000005614	chd3	94	94.737	Acanthochromis_polyacanthus
ENSPFOG00000012464	chd3	64	76.398	ENSAMEG00000003025	-	97	75.036	Ailuropoda_melanoleuca
ENSPFOG00000012464	chd3	75	95.676	ENSACIG00000019671	chd3	99	95.676	Amphilophus_citrinellus
ENSPFOG00000012464	chd3	100	91.386	ENSAOCG00000023784	chd3	100	92.088	Amphiprion_ocellaris
ENSPFOG00000012464	chd3	100	91.386	ENSAPEG00000006341	chd3	100	92.088	Amphiprion_percula
ENSPFOG00000012464	chd3	100	89.607	ENSATEG00000000848	chd3	100	90.023	Anabas_testudineus
ENSPFOG00000012464	chd3	91	75.615	ENSACAG00000004276	CHD3	92	74.681	Anolis_carolinensis
ENSPFOG00000012464	chd3	88	75.434	ENSANAG00000034323	CHD3	97	73.874	Aotus_nancymaae
ENSPFOG00000012464	chd3	86	96.099	ENSACLG00000009222	chd3	98	88.924	Astatotilapia_calliptera
ENSPFOG00000012464	chd3	92	74.005	ENSBTAG00000014377	CHD3	96	73.228	Bos_taurus
ENSPFOG00000012464	chd3	87	79.798	ENSCJAG00000014766	CHD3	91	80.272	Callithrix_jacchus
ENSPFOG00000012464	chd3	92	73.996	ENSCAFG00000016859	CHD3	95	72.852	Canis_familiaris
ENSPFOG00000012464	chd3	88	75.538	ENSCAFG00020007422	CHD3	98	78.786	Canis_lupus_dingo
ENSPFOG00000012464	chd3	92	73.882	ENSCHIG00000016737	CHD3	75	76.667	Capra_hircus
ENSPFOG00000012464	chd3	92	73.933	ENSTSYG00000035658	CHD3	94	76.782	Carlito_syrichta
ENSPFOG00000012464	chd3	92	71.170	ENSCAPG00000014864	CHD3	94	69.919	Cavia_aperea
ENSPFOG00000012464	chd3	92	73.782	ENSCPOG00000022653	CHD3	94	71.986	Cavia_porcellus
ENSPFOG00000012464	chd3	87	79.866	ENSCCAG00000034792	CHD3	88	80.000	Cebus_capucinus
ENSPFOG00000012464	chd3	86	80.135	ENSCATG00000041717	CHD3	94	71.631	Cercocebus_atys
ENSPFOG00000012464	chd3	92	76.627	ENSCLAG00000010523	CHD3	92	79.795	Chinchilla_lanigera
ENSPFOG00000012464	chd3	92	73.957	ENSCSAG00000011122	CHD3	76	77.180	Chlorocebus_sabaeus
ENSPFOG00000012464	chd3	79	93.151	ENSCPBG00000011966	CHD3	93	93.197	Chrysemys_picta_bellii
ENSPFOG00000012464	chd3	86	80.135	ENSCANG00000037641	CHD3	94	71.581	Colobus_angolensis_palliatus
ENSPFOG00000012464	chd3	90	77.106	ENSCGRG00001011306	Chd3	96	76.421	Cricetulus_griseus_chok1gshd
ENSPFOG00000012464	chd3	86	76.964	ENSCGRG00000007878	Chd3	91	78.275	Cricetulus_griseus_crigri
ENSPFOG00000012464	chd3	83	91.438	ENSCSEG00000004489	chd3	98	91.438	Cynoglossus_semilaevis
ENSPFOG00000012464	chd3	81	94.940	ENSCVAG00000007293	chd3	95	94.940	Cyprinodon_variegatus
ENSPFOG00000012464	chd3	90	84.190	ENSDARG00000021405	chd3	97	88.502	Danio_rerio
ENSPFOG00000012464	chd3	84	73.824	ENSDNOG00000047846	CHD3	82	72.971	Dasypus_novemcinctus
ENSPFOG00000012464	chd3	91	76.705	ENSDORG00000010713	Chd3	96	76.667	Dipodomys_ordii
ENSPFOG00000012464	chd3	92	69.266	ENSETEG00000017733	CHD3	99	71.382	Echinops_telfairi
ENSPFOG00000012464	chd3	67	74.863	ENSEBUG00000008310	chd3	98	68.762	Eptatretus_burgeri
ENSPFOG00000012464	chd3	86	75.644	ENSEASG00005019360	CHD3	98	74.450	Equus_asinus_asinus
ENSPFOG00000012464	chd3	86	75.751	ENSECAG00000010051	CHD3	98	74.185	Equus_caballus
ENSPFOG00000012464	chd3	78	89.796	ENSEEUG00000015205	CHD3	81	89.796	Erinaceus_europaeus
ENSPFOG00000012464	chd3	72	97.279	ENSELUG00000019499	chd3	99	97.279	Esox_lucius
ENSPFOG00000012464	chd3	92	73.631	ENSFCAG00000009629	CHD3	92	72.824	Felis_catus
ENSPFOG00000012464	chd3	88	75.039	ENSFDAG00000008220	CHD3	72	78.498	Fukomys_damarensis
ENSPFOG00000012464	chd3	81	86.176	ENSGMOG00000013599	chd3	90	86.579	Gadus_morhua
ENSPFOG00000012464	chd3	55	93.322	ENSGAFG00000004055	chd3	99	93.322	Gambusia_affinis
ENSPFOG00000012464	chd3	91	81.341	ENSGACG00000019275	chd3	97	81.284	Gasterosteus_aculeatus
ENSPFOG00000012464	chd3	66	82.339	ENSGAGG00000013164	CHD3	95	81.433	Gopherus_agassizii
ENSPFOG00000012464	chd3	92	73.859	ENSGGOG00000013496	CHD3	94	76.717	Gorilla_gorilla
ENSPFOG00000012464	chd3	91	76.709	ENSHGLG00000012017	CHD3	92	76.471	Heterocephalus_glaber_female
ENSPFOG00000012464	chd3	81	80.070	ENSHGLG00100013902	CHD3	95	83.012	Heterocephalus_glaber_male
ENSPFOG00000012464	chd3	94	85.089	ENSHCOG00000010170	chd3	99	85.345	Hippocampus_comes
ENSPFOG00000012464	chd3	80	84.466	ENSIPUG00000003271	chd3	96	85.663	Ictalurus_punctatus
ENSPFOG00000012464	chd3	92	73.645	ENSSTOG00000025907	CHD3	96	72.875	Ictidomys_tridecemlineatus
ENSPFOG00000012464	chd3	92	73.774	ENSJJAG00000017633	Chd3	92	80.137	Jaculus_jaculus
ENSPFOG00000012464	chd3	80	99.010	ENSKMAG00000019292	chd3	98	89.878	Kryptolebias_marmoratus
ENSPFOG00000012464	chd3	84	93.254	ENSLBEG00000028485	chd3	93	93.200	Labrus_bergylta
ENSPFOG00000012464	chd3	85	75.113	ENSLACG00000008031	CHD3	94	71.827	Latimeria_chalumnae
ENSPFOG00000012464	chd3	96	79.961	ENSLOCG00000013965	chd3	98	79.777	Lepisosteus_oculatus
ENSPFOG00000012464	chd3	83	83.740	ENSLAFG00000000572	CHD3	88	84.362	Loxodonta_africana
ENSPFOG00000012464	chd3	86	80.135	ENSMFAG00000020113	CHD3	98	72.786	Macaca_fascicularis
ENSPFOG00000012464	chd3	92	72.050	ENSMMUG00000022221	CHD3	90	81.507	Macaca_mulatta
ENSPFOG00000012464	chd3	92	73.808	ENSMNEG00000001728	CHD3	98	73.806	Macaca_nemestrina
ENSPFOG00000012464	chd3	86	80.135	ENSMLEG00000032249	CHD3	94	71.631	Mandrillus_leucophaeus
ENSPFOG00000012464	chd3	74	95.812	ENSMAMG00000000564	chd3	95	96.316	Mastacembelus_armatus
ENSPFOG00000012464	chd3	92	73.193	ENSMAUG00000013873	Chd3	98	72.484	Mesocricetus_auratus
ENSPFOG00000012464	chd3	92	73.933	ENSMICG00000008741	CHD3	88	79.452	Microcebus_murinus
ENSPFOG00000012464	chd3	92	73.343	ENSMOCG00000004848	Chd3	96	71.479	Microtus_ochrogaster
ENSPFOG00000012464	chd3	90	83.170	ENSMMOG00000012699	chd3	98	84.628	Mola_mola
ENSPFOG00000012464	chd3	86	75.108	ENSMODG00000007509	CHD3	98	79.605	Monodelphis_domestica
ENSPFOG00000012464	chd3	92	75.342	MGP_CAROLIEiJ_G0016564	Chd3	99	76.617	Mus_caroli
ENSPFOG00000012464	chd3	92	73.307	ENSMUSG00000018474	Chd3	98	71.660	Mus_musculus
ENSPFOG00000012464	chd3	92	76.518	MGP_PahariEiJ_G0017695	Chd3	99	77.466	Mus_pahari
ENSPFOG00000012464	chd3	92	73.357	MGP_SPRETEiJ_G0017400	Chd3	99	71.660	Mus_spretus
ENSPFOG00000012464	chd3	81	76.180	ENSMPUG00000008861	CHD3	94	76.772	Mustela_putorius_furo
ENSPFOG00000012464	chd3	92	73.183	ENSMLUG00000014643	-	95	72.866	Myotis_lucifugus
ENSPFOG00000012464	chd3	92	74.009	ENSNGAG00000000773	Chd3	94	72.594	Nannospalax_galili
ENSPFOG00000012464	chd3	81	86.644	ENSNBRG00000000636	chd3	98	87.517	Neolamprologus_brichardi
ENSPFOG00000012464	chd3	85	86.122	ENSNLEG00000009770	CHD3	91	83.071	Nomascus_leucogenys
ENSPFOG00000012464	chd3	77	78.361	ENSMEUG00000005852	CHD3	84	79.863	Notamacropus_eugenii
ENSPFOG00000012464	chd3	88	74.829	ENSOPRG00000011069	CHD3	98	73.396	Ochotona_princeps
ENSPFOG00000012464	chd3	92	73.959	ENSODEG00000017785	CHD3	75	76.471	Octodon_degus
ENSPFOG00000012464	chd3	91	88.313	ENSONIG00000009292	chd3	99	87.980	Oreochromis_niloticus
ENSPFOG00000012464	chd3	92	69.830	ENSOCUG00000029299	CHD3	97	68.826	Oryctolagus_cuniculus
ENSPFOG00000012464	chd3	77	87.575	ENSORLG00000007107	chd3	90	88.334	Oryzias_latipes
ENSPFOG00000012464	chd3	53	86.388	ENSORLG00020008387	chd3	76	91.359	Oryzias_latipes_hni
ENSPFOG00000012464	chd3	75	92.214	ENSOMEG00000013691	chd3	99	86.429	Oryzias_melastigma
ENSPFOG00000012464	chd3	92	73.983	ENSOGAG00000003216	CHD3	76	76.913	Otolemur_garnettii
ENSPFOG00000012464	chd3	92	73.114	ENSOARG00000017855	CHD3	95	72.382	Ovis_aries
ENSPFOG00000012464	chd3	87	78.878	ENSPPAG00000032886	CHD3	98	71.610	Pan_paniscus
ENSPFOG00000012464	chd3	91	76.982	ENSPPRG00000000626	CHD3	94	76.928	Panthera_pardus
ENSPFOG00000012464	chd3	87	80.135	ENSPTRG00000008714	CHD3	91	80.272	Pan_troglodytes
ENSPFOG00000012464	chd3	86	80.135	ENSPANG00000023938	CHD3	98	72.786	Papio_anubis
ENSPFOG00000012464	chd3	97	82.280	ENSPKIG00000006305	chd3	93	90.625	Paramormyrops_kingsleyae
ENSPFOG00000012464	chd3	51	80.486	ENSPSIG00000010177	CHD3	97	80.651	Pelodiscus_sinensis
ENSPFOG00000012464	chd3	93	73.052	ENSPEMG00000014262	Chd3	95	72.672	Peromyscus_maniculatus_bairdii
ENSPFOG00000012464	chd3	87	80.205	ENSPCIG00000005442	CHD3	90	90.955	Phascolarctos_cinereus
ENSPFOG00000012464	chd3	83	100.000	ENSPLAG00000002887	chd3	96	100.000	Poecilia_latipinna
ENSPFOG00000012464	chd3	54	90.862	ENSPMEG00000016725	chd3	95	90.862	Poecilia_mexicana
ENSPFOG00000012464	chd3	86	97.586	ENSPREG00000011044	chd3	97	97.586	Poecilia_reticulata
ENSPFOG00000012464	chd3	91	71.777	ENSPPYG00000007940	CHD3	75	73.774	Pongo_abelii
ENSPFOG00000012464	chd3	89	77.263	ENSPCAG00000004350	CHD3	93	76.638	Procavia_capensis
ENSPFOG00000012464	chd3	87	79.730	ENSPCOG00000020952	CHD3	93	71.755	Propithecus_coquereli
ENSPFOG00000012464	chd3	75	75.412	ENSPVAG00000016344	CHD3	80	74.794	Pteropus_vampyrus
ENSPFOG00000012464	chd3	96	83.019	ENSPNAG00000020393	chd3	98	92.933	Pygocentrus_nattereri
ENSPFOG00000012464	chd3	86	74.946	ENSRNOG00000009722	Chd3	98	74.462	Rattus_norvegicus
ENSPFOG00000012464	chd3	92	71.804	ENSRBIG00000033562	CHD3	98	72.231	Rhinopithecus_bieti
ENSPFOG00000012464	chd3	86	80.135	ENSRROG00000029554	CHD3	94	71.631	Rhinopithecus_roxellana
ENSPFOG00000012464	chd3	87	80.135	ENSSBOG00000020719	CHD3	94	71.631	Saimiri_boliviensis_boliviensis
ENSPFOG00000012464	chd3	92	73.618	ENSSHAG00000014412	CHD3	97	77.064	Sarcophilus_harrisii
ENSPFOG00000012464	chd3	80	87.016	ENSSFOG00015023123	chd3	95	80.511	Scleropages_formosus
ENSPFOG00000012464	chd3	86	90.065	ENSSMAG00000006451	chd3	95	95.789	Scophthalmus_maximus
ENSPFOG00000012464	chd3	51	85.636	ENSSDUG00000005792	chd3	76	91.986	Seriola_dumerili
ENSPFOG00000012464	chd3	98	91.643	ENSSPAG00000013694	chd3	98	94.764	Stegastes_partitus
ENSPFOG00000012464	chd3	92	74.095	ENSSSCG00000021363	CHD3	99	74.815	Sus_scrofa
ENSPFOG00000012464	chd3	77	83.976	ENSTRUG00000014990	chd3	94	85.635	Takifugu_rubripes
ENSPFOG00000012464	chd3	88	88.889	ENSTNIG00000012998	chd3	96	90.086	Tetraodon_nigroviridis
ENSPFOG00000012464	chd3	56	85.446	ENSTBEG00000011454	-	70	85.446	Tupaia_belangeri
ENSPFOG00000012464	chd3	89	77.188	ENSTTRG00000010295	CHD3	93	75.858	Tursiops_truncatus
ENSPFOG00000012464	chd3	81	83.898	ENSUAMG00000005475	CHD3	95	83.898	Ursus_americanus
ENSPFOG00000012464	chd3	93	72.469	ENSVVUG00000028011	CHD3	96	74.251	Vulpes_vulpes
ENSPFOG00000012464	chd3	91	67.866	ENSXETG00000012991	chd3	90	68.595	Xenopus_tropicalis
ENSPFOG00000012464	chd3	56	94.872	ENSXCOG00000000809	chd3	99	94.872	Xiphophorus_couchianus
ENSPFOG00000012464	chd3	74	98.913	ENSXMAG00000016035	chd3	99	98.913	Xiphophorus_maculatus