EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPFOG00000012490 (Gene tree)
Gene ID: 103136991
Gene Symbol: POP1
Alias: -
Full Name: POP1 homolog%2C ribonuclease P/MRP subunit
Gene Type: protein_coding
Species: Poecilia_formosa
Status: putative
Strand: Minus strand
Length: 11649 bases
Position: chrKI519646.1:2707318-2718966
Accession: 103136991
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPFOP00000012620	POP1	PF06978.11	1.7e-35	1	2
ENSPFOP00000012620	POP1	PF06978.11	1.7e-35	2	2
ENSPFOP00000026174	POP1	PF06978.11	1.9e-35	1	2
ENSPFOP00000026174	POP1	PF06978.11	1.9e-35	2	2
ENSPFOP00000012620	POPLD	PF08170.12	7.2e-28	1	1
ENSPFOP00000026174	POPLD	PF08170.12	7.6e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPFOT00000012637	POP1-201	3298	-	ENSPFOP00000012620	959 (aa)	XP_007550547	A0A087Y3L7
ENSPFOT00000023464	POP1-202	3268	-	ENSPFOP00000026174	997 (aa)	-	A0A096M433

Gene Model

Click here to download ENSPFOG00000012490's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000012490's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPFOG00000012490	POP1	100	48.219	ENSG00000104356	POP1	100	48.752	Homo_sapiens
ENSPFOG00000012490	POP1	100	74.115	ENSAPOG00000008198	pop1	100	74.115	Acanthochromis_polyacanthus
ENSPFOG00000012490	POP1	100	47.826	ENSAMEG00000000556	POP1	100	47.826	Ailuropoda_melanoleuca
ENSPFOG00000012490	POP1	100	67.781	ENSACIG00000004169	POP1	100	67.275	Amphilophus_citrinellus
ENSPFOG00000012490	POP1	100	73.887	ENSAOCG00000010991	pop1	100	73.887	Amphiprion_ocellaris
ENSPFOG00000012490	POP1	100	67.700	ENSAPEG00000007607	pop1	100	67.300	Amphiprion_percula
ENSPFOG00000012490	POP1	100	70.382	ENSATEG00000024814	POP1	100	70.783	Anabas_testudineus
ENSPFOG00000012490	POP1	94	50.265	ENSAPLG00000014418	POP1	99	50.372	Anas_platyrhynchos
ENSPFOG00000012490	POP1	100	47.099	ENSACAG00000016083	POP1	100	47.389	Anolis_carolinensis
ENSPFOG00000012490	POP1	87	54.079	ENSANAG00000026360	POP1	99	54.079	Aotus_nancymaae
ENSPFOG00000012490	POP1	100	70.292	ENSACLG00000010951	pop1	100	70.695	Astatotilapia_calliptera
ENSPFOG00000012490	POP1	100	55.479	ENSAMXG00000014483	POP1	100	55.479	Astyanax_mexicanus
ENSPFOG00000012490	POP1	100	48.276	ENSBTAG00000012596	POP1	100	48.412	Bos_taurus
ENSPFOG00000012490	POP1	100	48.012	ENSCJAG00000015567	POP1	100	48.588	Callithrix_jacchus
ENSPFOG00000012490	POP1	100	49.153	ENSCAFG00000000469	POP1	100	49.153	Canis_familiaris
ENSPFOG00000012490	POP1	100	48.105	ENSCAFG00020026765	POP1	100	48.105	Canis_lupus_dingo
ENSPFOG00000012490	POP1	94	52.582	ENSCHIG00000017066	POP1	100	48.750	Capra_hircus
ENSPFOG00000012490	POP1	100	47.843	ENSTSYG00000003097	POP1	100	47.985	Carlito_syrichta
ENSPFOG00000012490	POP1	100	46.287	ENSCAPG00000007251	POP1	100	46.287	Cavia_aperea
ENSPFOG00000012490	POP1	100	47.144	ENSCPOG00000002901	POP1	100	47.144	Cavia_porcellus
ENSPFOG00000012490	POP1	100	48.680	ENSCCAG00000018939	POP1	100	48.876	Cebus_capucinus
ENSPFOG00000012490	POP1	100	48.848	ENSCATG00000040916	POP1	100	48.848	Cercocebus_atys
ENSPFOG00000012490	POP1	100	47.064	ENSCLAG00000007208	POP1	97	47.485	Chinchilla_lanigera
ENSPFOG00000012490	POP1	91	50.374	ENSCSAG00000012340	POP1	98	50.539	Chlorocebus_sabaeus
ENSPFOG00000012490	POP1	93	47.188	ENSCHOG00000011432	POP1	96	47.539	Choloepus_hoffmanni
ENSPFOG00000012490	POP1	100	49.804	ENSCPBG00000006373	POP1	100	50.488	Chrysemys_picta_bellii
ENSPFOG00000012490	POP1	84	33.208	ENSCING00000008323	-	89	32.830	Ciona_intestinalis
ENSPFOG00000012490	POP1	100	48.799	ENSCANG00000001647	POP1	100	48.799	Colobus_angolensis_palliatus
ENSPFOG00000012490	POP1	100	46.332	ENSCGRG00001017308	Pop1	100	46.525	Cricetulus_griseus_chok1gshd
ENSPFOG00000012490	POP1	100	43.854	ENSCGRG00000010824	Pop1	100	44.236	Cricetulus_griseus_crigri
ENSPFOG00000012490	POP1	100	66.902	ENSCSEG00000008737	POP1	100	66.902	Cynoglossus_semilaevis
ENSPFOG00000012490	POP1	100	78.074	ENSCVAG00000022248	pop1	100	78.074	Cyprinodon_variegatus
ENSPFOG00000012490	POP1	53	53.846	ENSDARG00000102087	pop1	98	54.438	Danio_rerio
ENSPFOG00000012490	POP1	100	45.736	ENSDNOG00000019974	POP1	100	45.642	Dasypus_novemcinctus
ENSPFOG00000012490	POP1	100	42.166	ENSDORG00000015384	Pop1	100	42.304	Dipodomys_ordii
ENSPFOG00000012490	POP1	80	33.023	FBgn0026702	l(1)G0045	93	33.023	Drosophila_melanogaster
ENSPFOG00000012490	POP1	88	46.575	ENSETEG00000007839	POP1	88	46.575	Echinops_telfairi
ENSPFOG00000012490	POP1	52	42.383	ENSEBUG00000009897	pop1	96	42.383	Eptatretus_burgeri
ENSPFOG00000012490	POP1	100	47.830	ENSEASG00005003189	POP1	98	48.450	Equus_asinus_asinus
ENSPFOG00000012490	POP1	100	48.450	ENSECAG00000024236	POP1	100	48.643	Equus_caballus
ENSPFOG00000012490	POP1	51	69.512	ENSEEUG00000003050	-	53	78.788	Erinaceus_europaeus
ENSPFOG00000012490	POP1	100	61.179	ENSELUG00000003526	pop1	100	61.585	Esox_lucius
ENSPFOG00000012490	POP1	100	47.919	ENSFCAG00000002168	POP1	100	47.919	Felis_catus
ENSPFOG00000012490	POP1	100	47.517	ENSFALG00000005711	POP1	100	47.721	Ficedula_albicollis
ENSPFOG00000012490	POP1	100	46.731	ENSFDAG00000017068	POP1	100	46.923	Fukomys_damarensis
ENSPFOG00000012490	POP1	100	78.016	ENSFHEG00000019518	pop1	100	78.016	Fundulus_heteroclitus
ENSPFOG00000012490	POP1	100	58.683	ENSGMOG00000000659	POP1	100	58.184	Gadus_morhua
ENSPFOG00000012490	POP1	100	92.604	ENSGAFG00000019770	POP1	100	92.604	Gambusia_affinis
ENSPFOG00000012490	POP1	96	70.421	ENSGACG00000003499	pop1	100	63.542	Gasterosteus_aculeatus
ENSPFOG00000012490	POP1	100	49.319	ENSGAGG00000011737	POP1	98	49.516	Gopherus_agassizii
ENSPFOG00000012490	POP1	100	48.266	ENSGGOG00000003176	POP1	100	48.656	Gorilla_gorilla
ENSPFOG00000012490	POP1	100	70.695	ENSHBUG00000021583	pop1	100	71.098	Haplochromis_burtoni
ENSPFOG00000012490	POP1	100	46.418	ENSHGLG00000006029	POP1	100	46.833	Heterocephalus_glaber_female
ENSPFOG00000012490	POP1	100	46.418	ENSHGLG00100016879	POP1	100	46.833	Heterocephalus_glaber_male
ENSPFOG00000012490	POP1	100	61.986	ENSHCOG00000013888	pop1	100	61.585	Hippocampus_comes
ENSPFOG00000012490	POP1	99	55.794	ENSIPUG00000018336	pop1	100	55.739	Ictalurus_punctatus
ENSPFOG00000012490	POP1	100	47.104	ENSSTOG00000011455	POP1	97	47.008	Ictidomys_tridecemlineatus
ENSPFOG00000012490	POP1	100	46.548	ENSJJAG00000013325	Pop1	100	46.548	Jaculus_jaculus
ENSPFOG00000012490	POP1	100	73.922	ENSKMAG00000001346	POP1	100	73.922	Kryptolebias_marmoratus
ENSPFOG00000012490	POP1	100	64.205	ENSLBEG00000024457	POP1	100	64.000	Labrus_bergylta
ENSPFOG00000012490	POP1	94	50.932	ENSLACG00000012498	POP1	98	51.390	Latimeria_chalumnae
ENSPFOG00000012490	POP1	100	55.273	ENSLOCG00000009817	POP1	100	56.342	Lepisosteus_oculatus
ENSPFOG00000012490	POP1	100	47.801	ENSLAFG00000010770	POP1	100	48.511	Loxodonta_africana
ENSPFOG00000012490	POP1	100	48.233	ENSMFAG00000000347	POP1	100	48.752	Macaca_fascicularis
ENSPFOG00000012490	POP1	100	48.138	ENSMNEG00000036870	POP1	100	48.656	Macaca_nemestrina
ENSPFOG00000012490	POP1	100	48.424	ENSMLEG00000034986	POP1	100	48.944	Mandrillus_leucophaeus
ENSPFOG00000012490	POP1	100	69.534	ENSMAMG00000004040	pop1	100	69.028	Mastacembelus_armatus
ENSPFOG00000012490	POP1	100	70.493	ENSMZEG00005025448	pop1	100	70.896	Maylandia_zebra
ENSPFOG00000012490	POP1	100	47.081	ENSMGAG00000012167	POP1	100	47.283	Meleagris_gallopavo
ENSPFOG00000012490	POP1	100	46.842	ENSMAUG00000017537	Pop1	100	46.842	Mesocricetus_auratus
ENSPFOG00000012490	POP1	100	47.228	ENSMICG00000004361	POP1	100	47.278	Microcebus_murinus
ENSPFOG00000012490	POP1	100	47.278	ENSMOCG00000006356	Pop1	100	47.278	Microtus_ochrogaster
ENSPFOG00000012490	POP1	100	63.608	ENSMMOG00000018242	pop1	100	63.608	Mola_mola
ENSPFOG00000012490	POP1	100	45.733	ENSMODG00000006561	POP1	100	46.073	Monodelphis_domestica
ENSPFOG00000012490	POP1	100	69.285	ENSMALG00000012621	POP1	100	69.246	Monopterus_albus
ENSPFOG00000012490	POP1	100	44.877	MGP_CAROLIEiJ_G0019726	Pop1	100	45.377	Mus_caroli
ENSPFOG00000012490	POP1	100	45.024	ENSMUSG00000022325	Pop1	100	45.429	Mus_musculus
ENSPFOG00000012490	POP1	100	44.498	MGP_PahariEiJ_G0019735	Pop1	100	45.000	Mus_pahari
ENSPFOG00000012490	POP1	100	45.100	MGP_SPRETEiJ_G0020622	Pop1	100	45.602	Mus_spretus
ENSPFOG00000012490	POP1	100	48.162	ENSMPUG00000015250	POP1	100	48.162	Mustela_putorius_furo
ENSPFOG00000012490	POP1	100	46.667	ENSMLUG00000010204	POP1	100	46.821	Myotis_lucifugus
ENSPFOG00000012490	POP1	100	46.456	ENSNGAG00000001582	Pop1	100	46.794	Nannospalax_galili
ENSPFOG00000012490	POP1	92	75.000	ENSNBRG00000002356	pop1	97	75.000	Neolamprologus_brichardi
ENSPFOG00000012490	POP1	100	48.848	ENSNLEG00000002541	POP1	100	48.848	Nomascus_leucogenys
ENSPFOG00000012490	POP1	87	54.142	ENSMEUG00000003118	POP1	90	54.142	Notamacropus_eugenii
ENSPFOG00000012490	POP1	100	47.656	ENSOPRG00000007667	POP1	100	47.656	Ochotona_princeps
ENSPFOG00000012490	POP1	100	46.628	ENSODEG00000003984	POP1	100	46.905	Octodon_degus
ENSPFOG00000012490	POP1	100	70.594	ENSONIG00000016445	pop1	100	70.997	Oreochromis_niloticus
ENSPFOG00000012490	POP1	61	45.924	ENSOANG00000001278	-	94	45.924	Ornithorhynchus_anatinus
ENSPFOG00000012490	POP1	100	47.019	ENSOCUG00000017400	POP1	100	47.115	Oryctolagus_cuniculus
ENSPFOG00000012490	POP1	100	70.062	ENSORLG00000002839	pop1	100	70.679	Oryzias_latipes
ENSPFOG00000012490	POP1	92	68.450	ENSORLG00020022450	POP1	95	68.578	Oryzias_latipes_hni
ENSPFOG00000012490	POP1	100	69.980	ENSORLG00015012746	POP1	100	70.594	Oryzias_latipes_hsok
ENSPFOG00000012490	POP1	100	69.223	ENSOMEG00000006915	pop1	99	69.845	Oryzias_melastigma
ENSPFOG00000012490	POP1	100	46.660	ENSOGAG00000001466	POP1	100	47.267	Otolemur_garnettii
ENSPFOG00000012490	POP1	100	48.412	ENSPPAG00000018410	POP1	100	48.944	Pan_paniscus
ENSPFOG00000012490	POP1	100	47.679	ENSPPRG00000005002	POP1	100	47.679	Panthera_pardus
ENSPFOG00000012490	POP1	100	47.776	ENSPTIG00000016527	POP1	100	47.776	Panthera_tigris_altaica
ENSPFOG00000012490	POP1	100	48.316	ENSPTRG00000020458	POP1	100	48.848	Pan_troglodytes
ENSPFOG00000012490	POP1	100	48.520	ENSPANG00000009704	POP1	100	49.040	Papio_anubis
ENSPFOG00000012490	POP1	100	59.123	ENSPKIG00000016325	POP1	100	59.123	Paramormyrops_kingsleyae
ENSPFOG00000012490	POP1	100	48.752	ENSPSIG00000012343	POP1	100	49.711	Pelodiscus_sinensis
ENSPFOG00000012490	POP1	100	61.800	ENSPMGG00000022253	POP1	100	61.700	Periophthalmus_magnuspinnatus
ENSPFOG00000012490	POP1	99	46.358	ENSPEMG00000023633	Pop1	100	46.358	Peromyscus_maniculatus_bairdii
ENSPFOG00000012490	POP1	91	43.022	ENSPMAG00000003209	POP1	99	43.129	Petromyzon_marinus
ENSPFOG00000012490	POP1	100	45.954	ENSPCIG00000012216	POP1	100	45.954	Phascolarctos_cinereus
ENSPFOG00000012490	POP1	100	98.853	ENSPLAG00000004646	POP1	100	98.853	Poecilia_latipinna
ENSPFOG00000012490	POP1	100	98.958	ENSPMEG00000019592	POP1	100	98.958	Poecilia_mexicana
ENSPFOG00000012490	POP1	100	95.426	ENSPREG00000020951	POP1	100	95.426	Poecilia_reticulata
ENSPFOG00000012490	POP1	100	48.369	ENSPPYG00000018777	POP1	100	48.464	Pongo_abelii
ENSPFOG00000012490	POP1	100	46.029	ENSPCAG00000016662	POP1	100	45.933	Procavia_capensis
ENSPFOG00000012490	POP1	100	46.962	ENSPCOG00000019420	POP1	100	47.115	Propithecus_coquereli
ENSPFOG00000012490	POP1	100	47.292	ENSPVAG00000014468	POP1	100	48.112	Pteropus_vampyrus
ENSPFOG00000012490	POP1	100	66.259	ENSPNYG00000004476	pop1	99	67.738	Pundamilia_nyererei
ENSPFOG00000012490	POP1	100	55.186	ENSPNAG00000000265	pop1	100	55.186	Pygocentrus_nattereri
ENSPFOG00000012490	POP1	100	45.810	ENSRNOG00000005243	Pop1	100	46.000	Rattus_norvegicus
ENSPFOG00000012490	POP1	100	49.040	ENSRBIG00000007996	POP1	100	49.040	Rhinopithecus_bieti
ENSPFOG00000012490	POP1	100	49.040	ENSRROG00000012334	POP1	100	49.040	Rhinopithecus_roxellana
ENSPFOG00000012490	POP1	99	48.054	ENSSBOG00000020830	POP1	100	48.249	Saimiri_boliviensis_boliviensis
ENSPFOG00000012490	POP1	100	45.857	ENSSHAG00000000296	POP1	100	45.857	Sarcophilus_harrisii
ENSPFOG00000012490	POP1	100	59.346	ENSSFOG00015007429	pop1	99	59.346	Scleropages_formosus
ENSPFOG00000012490	POP1	100	67.656	ENSSMAG00000010467	POP1	100	67.963	Scophthalmus_maximus
ENSPFOG00000012490	POP1	100	71.198	ENSSDUG00000007817	POP1	100	71.198	Seriola_dumerili
ENSPFOG00000012490	POP1	100	71.400	ENSSLDG00000012565	POP1	100	71.400	Seriola_lalandi_dorsalis
ENSPFOG00000012490	POP1	100	46.012	ENSSPUG00000003550	-	100	46.311	Sphenodon_punctatus
ENSPFOG00000012490	POP1	100	70.438	ENSSPAG00000014955	pop1	100	69.827	Stegastes_partitus
ENSPFOG00000012490	POP1	100	47.549	ENSSSCG00000006078	POP1	100	47.549	Sus_scrofa
ENSPFOG00000012490	POP1	94	44.479	ENSTGUG00000012011	-	100	44.690	Taeniopygia_guttata
ENSPFOG00000012490	POP1	100	66.154	ENSTRUG00000010856	pop1	100	66.154	Takifugu_rubripes
ENSPFOG00000012490	POP1	95	67.469	ENSTNIG00000013297	pop1	100	67.503	Tetraodon_nigroviridis
ENSPFOG00000012490	POP1	93	47.219	ENSTBEG00000014214	POP1	96	47.219	Tupaia_belangeri
ENSPFOG00000012490	POP1	100	45.821	ENSTTRG00000016071	POP1	100	46.191	Tursiops_truncatus
ENSPFOG00000012490	POP1	99	48.361	ENSUAMG00000017309	POP1	100	48.361	Ursus_americanus
ENSPFOG00000012490	POP1	100	47.209	ENSUMAG00000016952	POP1	100	50.376	Ursus_maritimus
ENSPFOG00000012490	POP1	85	52.364	ENSVPAG00000008278	POP1	81	53.091	Vicugna_pacos
ENSPFOG00000012490	POP1	100	47.522	ENSVVUG00000010994	POP1	100	47.522	Vulpes_vulpes
ENSPFOG00000012490	POP1	100	80.061	ENSXCOG00000017043	POP1	100	79.349	Xiphophorus_couchianus
ENSPFOG00000012490	POP1	100	91.354	ENSXMAG00000002472	POP1	100	91.354	Xiphophorus_maculatus