EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPFOG00000012685 (Gene tree)
Gene ID: 103148879
Gene Symbol: -
Alias: -
Full Name: RNA-binding protein 4.1-like
Gene Type: protein_coding
Species: Poecilia_formosa
Status: putative
Strand: Minus strand
Length: 4026 bases
Position: chrKI519824.1:477143-481168
Accession: 103148879
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPFOP00000012672	zf-CCHC	PF00098.23	6.3e-05	1	1
ENSPFOP00000012672	RRM_5	PF13893.6	5e-07	1	1
ENSPFOP00000012672	RRM_1	PF00076.22	9.2e-33	1	2
ENSPFOP00000012672	RRM_1	PF00076.22	9.2e-33	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPFOT00000012689	-	2231	-	ENSPFOP00000012672	379 (aa)	XP_007567913	A0A087Y3R9

Gene Model

Click here to download ENSPFOG00000012685's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000012685's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPFOG00000012685	-	99	48.077	ENSPFOG00000012675	rbm4.1	99	46.875

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPFOG00000012685	-	99	45.863	ENSAPOG00000012353	rbm4.1	99	46.043	Acanthochromis_polyacanthus
ENSPFOG00000012685	-	99	45.433	ENSACIG00000016482	rbm4.1	99	47.596	Amphilophus_citrinellus
ENSPFOG00000012685	-	99	45.863	ENSAOCG00000010915	rbm4.1	99	46.043	Amphiprion_ocellaris
ENSPFOG00000012685	-	99	45.863	ENSAPEG00000009494	rbm4.1	99	46.043	Amphiprion_percula
ENSPFOG00000012685	-	99	46.136	ENSATEG00000001904	rbm4.1	99	47.129	Anabas_testudineus
ENSPFOG00000012685	-	99	45.902	ENSACLG00000007722	rbm4.1	99	47.837	Astatotilapia_calliptera
ENSPFOG00000012685	-	100	64.872	ENSACLG00000007740	-	100	64.872	Astatotilapia_calliptera
ENSPFOG00000012685	-	99	50.909	ENSAMXG00000036611	rbm4.1	99	51.042	Astyanax_mexicanus
ENSPFOG00000012685	-	59	50.725	ENSCPBG00000023666	-	92	50.725	Chrysemys_picta_bellii
ENSPFOG00000012685	-	100	61.616	ENSCSEG00000014359	-	100	61.111	Cynoglossus_semilaevis
ENSPFOG00000012685	-	97	46.229	ENSCSEG00000014365	rbm4.1	99	44.706	Cynoglossus_semilaevis
ENSPFOG00000012685	-	99	46.860	ENSCVAG00000019349	rbm4.1	99	47.017	Cyprinodon_variegatus
ENSPFOG00000012685	-	99	48.077	ENSDARG00000036386	rbm4.1	79	71.739	Danio_rerio
ENSPFOG00000012685	-	99	47.487	ENSDARG00000055080	rbm4.2	99	51.295	Danio_rerio
ENSPFOG00000012685	-	99	47.406	ENSELUG00000013205	rbm4.1	99	47.733	Esox_lucius
ENSPFOG00000012685	-	99	47.608	ENSFHEG00000022926	rbm4.1	99	47.268	Fundulus_heteroclitus
ENSPFOG00000012685	-	100	58.186	ENSGMOG00000007455	-	100	58.897	Gadus_morhua
ENSPFOG00000012685	-	99	47.837	ENSGAFG00000019302	rbm4.1	99	46.635	Gambusia_affinis
ENSPFOG00000012685	-	100	62.564	ENSGACG00000000821	-	100	62.564	Gasterosteus_aculeatus
ENSPFOG00000012685	-	95	49.589	ENSGACG00000000822	rbm4.1	96	49.315	Gasterosteus_aculeatus
ENSPFOG00000012685	-	59	50.725	ENSGAGG00000014558	-	92	50.725	Gopherus_agassizii
ENSPFOG00000012685	-	99	45.902	ENSHBUG00000011610	rbm4.1	99	47.837	Haplochromis_burtoni
ENSPFOG00000012685	-	93	50.959	ENSIPUG00000022937	rbm4.2	97	51.047	Ictalurus_punctatus
ENSPFOG00000012685	-	99	46.588	ENSIPUG00000022931	rbm4.1	99	46.099	Ictalurus_punctatus
ENSPFOG00000012685	-	100	61.845	ENSKMAG00000006528	-	100	62.095	Kryptolebias_marmoratus
ENSPFOG00000012685	-	95	47.859	ENSKMAG00000006556	rbm4.1	95	48.363	Kryptolebias_marmoratus
ENSPFOG00000012685	-	99	45.585	ENSLBEG00000019782	rbm4.1	99	46.890	Labrus_bergylta
ENSPFOG00000012685	-	100	65.897	ENSLBEG00000019756	-	100	67.436	Labrus_bergylta
ENSPFOG00000012685	-	100	66.835	ENSMAMG00000001760	-	100	67.342	Mastacembelus_armatus
ENSPFOG00000012685	-	54	57.339	ENSMZEG00005028158	-	69	57.407	Maylandia_zebra
ENSPFOG00000012685	-	99	45.902	ENSMZEG00005009205	rbm4.1	99	47.837	Maylandia_zebra
ENSPFOG00000012685	-	99	46.172	ENSMMOG00000020479	rbm4.1	99	45.694	Mola_mola
ENSPFOG00000012685	-	99	47.406	ENSMALG00000020544	rbm4.1	99	46.190	Monopterus_albus
ENSPFOG00000012685	-	100	69.898	ENSMALG00000020557	-	100	69.898	Monopterus_albus
ENSPFOG00000012685	-	99	45.902	ENSNBRG00000017755	rbm4.1	99	47.837	Neolamprologus_brichardi
ENSPFOG00000012685	-	99	45.902	ENSONIG00000015730	rbm4.1	99	47.837	Oreochromis_niloticus
ENSPFOG00000012685	-	99	45.863	ENSORLG00000012496	rbm4.1	99	46.135	Oryzias_latipes
ENSPFOG00000012685	-	99	45.863	ENSORLG00020012454	rbm4.1	99	46.135	Oryzias_latipes_hni
ENSPFOG00000012685	-	99	45.863	ENSORLG00015013678	rbm4.1	99	46.135	Oryzias_latipes_hsok
ENSPFOG00000012685	-	99	46.336	ENSOMEG00000001001	rbm4.1	99	46.377	Oryzias_melastigma
ENSPFOG00000012685	-	87	67.204	ENSPKIG00000020805	rbm4.1	85	69.565	Paramormyrops_kingsleyae
ENSPFOG00000012685	-	59	97.887	ENSPLAG00000018569	-	90	97.887	Poecilia_latipinna
ENSPFOG00000012685	-	99	48.077	ENSPLAG00000018572	rbm4.1	99	46.875	Poecilia_latipinna
ENSPFOG00000012685	-	99	48.077	ENSPMEG00000006290	rbm4.1	99	46.875	Poecilia_mexicana
ENSPFOG00000012685	-	59	97.887	ENSPMEG00000006278	-	90	97.887	Poecilia_mexicana
ENSPFOG00000012685	-	99	48.077	ENSPREG00000003724	rbm4.1	99	46.875	Poecilia_reticulata
ENSPFOG00000012685	-	100	92.876	ENSPREG00000003764	-	100	92.876	Poecilia_reticulata
ENSPFOG00000012685	-	99	45.902	ENSPNYG00000004662	rbm4.1	99	47.837	Pundamilia_nyererei
ENSPFOG00000012685	-	95	53.784	ENSPNAG00000013057	rbm4.2	95	53.243	Pygocentrus_nattereri
ENSPFOG00000012685	-	99	48.058	ENSPNAG00000002539	rbm4.1	99	48.905	Pygocentrus_nattereri
ENSPFOG00000012685	-	86	67.742	ENSSFOG00015021996	sf1	99	45.673	Scleropages_formosus
ENSPFOG00000012685	-	99	45.047	ENSSMAG00000007571	rbm4.1	99	45.215	Scophthalmus_maximus
ENSPFOG00000012685	-	100	67.342	ENSSDUG00000003936	-	100	68.101	Seriola_dumerili
ENSPFOG00000012685	-	99	45.283	ENSSDUG00000003925	rbm4.1	99	45.368	Seriola_dumerili
ENSPFOG00000012685	-	100	65.394	ENSSLDG00000013157	-	100	67.089	Seriola_lalandi_dorsalis
ENSPFOG00000012685	-	99	45.283	ENSSLDG00000013147	rbm4.1	99	45.368	Seriola_lalandi_dorsalis
ENSPFOG00000012685	-	99	45.412	ENSSPAG00000019053	rbm4.1	99	47.143	Stegastes_partitus
ENSPFOG00000012685	-	100	68.112	ENSSPAG00000019046	-	100	68.112	Stegastes_partitus
ENSPFOG00000012685	-	98	45.874	ENSTRUG00000013334	rbm4.1	98	44.988	Takifugu_rubripes
ENSPFOG00000012685	-	100	62.404	ENSTRUG00000013328	-	100	62.148	Takifugu_rubripes
ENSPFOG00000012685	-	95	47.802	ENSTNIG00000004821	rbm4.1	94	46.978	Tetraodon_nigroviridis
ENSPFOG00000012685	-	100	60.668	ENSTNIG00000000316	-	100	61.125	Tetraodon_nigroviridis
ENSPFOG00000012685	-	77	47.099	ENSXETG00000026649	rbm4b	93	41.274	Xenopus_tropicalis
ENSPFOG00000012685	-	99	48.077	ENSXCOG00000003731	rbm4.1	99	46.875	Xiphophorus_couchianus
ENSPFOG00000012685	-	100	97.889	ENSXMAG00000008059	-	100	97.889	Xiphophorus_maculatus
ENSPFOG00000012685	-	99	48.077	ENSXMAG00000008069	rbm4.1	99	46.875	Xiphophorus_maculatus