EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPFOG00000012703 (Gene tree)
Gene ID: 103156207
Gene Symbol: zgc:171480
Alias: -
Full Name: mitochondrial ribosomal protein L55
Gene Type: protein_coding
Species: Poecilia_formosa
Status: putative
Strand: Plus strand
Length: 8356 bases
Position: chrKI520080.1:3626-11981
Accession: 103156207
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPFOP00000012701	Mitoc_L55	PF09776.9	9.6e-38	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPFOT00000012718	-	1368	-	ENSPFOP00000012701	140 (aa)	XP_007578245	A0A087Y3U8

Gene Model

Click here to download ENSPFOG00000012703's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000012703's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPFOG00000012703	zgc:171480	88	61.538	ENSAPOG00000002881	zgc:171480	90	61.538	Acanthochromis_polyacanthus
ENSPFOG00000012703	zgc:171480	74	72.816	ENSACIG00000001646	zgc:171480	76	72.816	Amphilophus_citrinellus
ENSPFOG00000012703	zgc:171480	89	62.121	ENSAOCG00000016155	zgc:171480	92	62.121	Amphiprion_ocellaris
ENSPFOG00000012703	zgc:171480	89	62.121	ENSAPEG00000022327	zgc:171480	92	62.121	Amphiprion_percula
ENSPFOG00000012703	zgc:171480	99	55.479	ENSATEG00000005625	zgc:171480	99	55.479	Anabas_testudineus
ENSPFOG00000012703	zgc:171480	71	55.446	ENSACAG00000006897	-	80	54.455	Anolis_carolinensis
ENSPFOG00000012703	zgc:171480	91	60.630	ENSACLG00000005172	zgc:171480	88	60.630	Astatotilapia_calliptera
ENSPFOG00000012703	zgc:171480	74	60.577	ENSAMXG00000043839	zgc:171480	79	60.577	Astyanax_mexicanus
ENSPFOG00000012703	zgc:171480	71	55.000	ENSCPBG00000001771	-	80	55.000	Chrysemys_picta_bellii
ENSPFOG00000012703	zgc:171480	99	48.201	ENSCSEG00000019533	zgc:171480	99	48.201	Cynoglossus_semilaevis
ENSPFOG00000012703	zgc:171480	74	62.136	ENSDARG00000043402	zgc:171480	77	62.136	Danio_rerio
ENSPFOG00000012703	zgc:171480	99	48.227	ENSELUG00000007716	zgc:171480	100	48.227	Esox_lucius
ENSPFOG00000012703	zgc:171480	65	47.253	ENSFALG00000001083	-	94	47.253	Ficedula_albicollis
ENSPFOG00000012703	zgc:171480	76	87.736	ENSFHEG00000000203	zgc:171480	100	74.101	Fundulus_heteroclitus
ENSPFOG00000012703	zgc:171480	73	66.667	ENSGMOG00000019009	zgc:171480	100	66.667	Gadus_morhua
ENSPFOG00000012703	zgc:171480	81	40.351	ENSGALG00000038820	-	100	41.228	Gallus_gallus
ENSPFOG00000012703	zgc:171480	91	89.764	ENSGAFG00000004832	-	88	89.764	Gambusia_affinis
ENSPFOG00000012703	zgc:171480	66	78.261	ENSGACG00000002136	zgc:171480	100	78.261	Gasterosteus_aculeatus
ENSPFOG00000012703	zgc:171480	71	53.000	ENSGAGG00000001806	-	81	53.000	Gopherus_agassizii
ENSPFOG00000012703	zgc:171480	91	60.630	ENSHBUG00000007895	zgc:171480	88	60.630	Haplochromis_burtoni
ENSPFOG00000012703	zgc:171480	81	66.087	ENSHCOG00000003526	zgc:171480	63	66.087	Hippocampus_comes
ENSPFOG00000012703	zgc:171480	94	48.872	ENSIPUG00000001273	mrpl55	96	48.872	Ictalurus_punctatus
ENSPFOG00000012703	zgc:171480	74	70.874	ENSKMAG00000002011	zgc:171480	81	70.874	Kryptolebias_marmoratus
ENSPFOG00000012703	zgc:171480	74	74.038	ENSLBEG00000010915	zgc:171480	83	74.038	Labrus_bergylta
ENSPFOG00000012703	zgc:171480	74	74.038	ENSLBEG00000016107	-	83	74.038	Labrus_bergylta
ENSPFOG00000012703	zgc:171480	84	54.622	ENSLACG00000016281	zgc:171480	89	54.622	Latimeria_chalumnae
ENSPFOG00000012703	zgc:171480	100	57.143	ENSMAMG00000022250	zgc:171480	100	57.143	Mastacembelus_armatus
ENSPFOG00000012703	zgc:171480	91	60.630	ENSMZEG00005015585	zgc:171480	88	60.630	Maylandia_zebra
ENSPFOG00000012703	zgc:171480	71	44.444	ENSMGAG00000002612	-	87	44.444	Meleagris_gallopavo
ENSPFOG00000012703	zgc:171480	86	47.500	ENSMMOG00000008740	-	90	47.500	Mola_mola
ENSPFOG00000012703	zgc:171480	75	60.952	ENSMALG00000019823	zgc:171480	83	60.952	Monopterus_albus
ENSPFOG00000012703	zgc:171480	91	59.843	ENSNBRG00000019447	zgc:171480	88	59.843	Neolamprologus_brichardi
ENSPFOG00000012703	zgc:171480	91	59.843	ENSONIG00000007645	zgc:171480	90	59.843	Oreochromis_niloticus
ENSPFOG00000012703	zgc:171480	81	63.158	ENSORLG00020006963	zgc:171480	84	63.158	Oryzias_latipes_hni
ENSPFOG00000012703	zgc:171480	84	61.017	ENSORLG00015003266	zgc:171480	86	60.870	Oryzias_latipes_hsok
ENSPFOG00000012703	zgc:171480	85	63.025	ENSOMEG00000008184	zgc:171480	86	63.025	Oryzias_melastigma
ENSPFOG00000012703	zgc:171480	89	51.587	ENSPKIG00000006753	zgc:171480	95	51.587	Paramormyrops_kingsleyae
ENSPFOG00000012703	zgc:171480	74	53.398	ENSPSIG00000010893	-	82	53.398	Pelodiscus_sinensis
ENSPFOG00000012703	zgc:171480	86	59.016	ENSPMGG00000012657	-	92	59.016	Periophthalmus_magnuspinnatus
ENSPFOG00000012703	zgc:171480	66	46.316	ENSPMAG00000000867	zgc:171480	100	41.880	Petromyzon_marinus
ENSPFOG00000012703	zgc:171480	90	45.455	ENSPCIG00000021848	-	98	45.455	Phascolarctos_cinereus
ENSPFOG00000012703	zgc:171480	100	97.857	ENSPREG00000020328	zgc:171480	100	97.857	Poecilia_reticulata
ENSPFOG00000012703	zgc:171480	94	54.135	ENSPNAG00000017309	zgc:171480	96	54.135	Pygocentrus_nattereri
ENSPFOG00000012703	zgc:171480	76	59.813	ENSSFOG00015015668	mrpl55	80	59.813	Scleropages_formosus
ENSPFOG00000012703	zgc:171480	84	63.559	ENSSMAG00000005429	zgc:171480	84	63.559	Scophthalmus_maximus
ENSPFOG00000012703	zgc:171480	99	58.865	ENSSDUG00000022556	zgc:171480	96	58.865	Seriola_dumerili
ENSPFOG00000012703	zgc:171480	99	58.156	ENSSLDG00000019598	zgc:171480	96	58.156	Seriola_lalandi_dorsalis
ENSPFOG00000012703	zgc:171480	71	50.000	ENSSPUG00000000735	-	80	50.000	Sphenodon_punctatus
ENSPFOG00000012703	zgc:171480	89	66.667	ENSSPAG00000011598	zgc:171480	91	66.667	Stegastes_partitus
ENSPFOG00000012703	zgc:171480	82	60.870	ENSTRUG00000003082	zgc:171480	81	60.870	Takifugu_rubripes
ENSPFOG00000012703	zgc:171480	85	79.832	ENSXCOG00000005887	zgc:171480	95	79.832	Xiphophorus_couchianus
ENSPFOG00000012703	zgc:171480	100	90.000	ENSXMAG00000007937	zgc:171480	100	90.000	Xiphophorus_maculatus