EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPFOG00000012823 (Gene tree)
Gene ID: 103136437
Gene Symbol: parn
Alias: -
Full Name: poly(A)-specific ribonuclease
Gene Type: protein_coding
Species: Poecilia_formosa
Status: putative
Strand: Minus strand
Length: 12833 bases
Position: chrKI519642.1:2470873-2483705
Accession: 103136437
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPFOP00000013022	RNA_bind	PF08675.11	1.5e-33	1	1
ENSPFOP00000013022	CAF1	PF04857.20	3.3e-91	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPFOT00000013040	-	4928	-	ENSPFOP00000013022	683 (aa)	XP_007549755	A0A087Y4R9

Gene Model

Click here to download ENSPFOG00000012823's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000012823's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPFOG00000012823	parn	84	72.896	ENSG00000140694	PARN	91	79.661	Homo_sapiens
ENSPFOG00000012823	parn	78	77.281	ENSAMEG00000011208	PARN	83	77.281	Ailuropoda_melanoleuca
ENSPFOG00000012823	parn	87	79.095	ENSACIG00000000619	parn	100	79.095	Amphilophus_citrinellus
ENSPFOG00000012823	parn	100	83.309	ENSAOCG00000003465	parn	100	83.309	Amphiprion_ocellaris
ENSPFOG00000012823	parn	73	88.176	ENSAPEG00000010661	parn	95	88.176	Amphiprion_percula
ENSPFOG00000012823	parn	100	83.819	ENSATEG00000004661	parn	100	84.402	Anabas_testudineus
ENSPFOG00000012823	parn	83	72.089	ENSAPLG00000013914	PARN	89	72.997	Anas_platyrhynchos
ENSPFOG00000012823	parn	84	73.367	ENSACAG00000004973	PARN	89	74.106	Anolis_carolinensis
ENSPFOG00000012823	parn	84	72.559	ENSANAG00000031516	PARN	91	79.661	Aotus_nancymaae
ENSPFOG00000012823	parn	100	84.672	ENSACLG00000004742	parn	100	85.109	Astatotilapia_calliptera
ENSPFOG00000012823	parn	100	69.913	ENSAMXG00000012390	parn	97	73.826	Astyanax_mexicanus
ENSPFOG00000012823	parn	84	70.270	ENSBTAG00000018097	PARN	89	72.937	Bos_taurus
ENSPFOG00000012823	parn	84	72.727	ENSCJAG00000015866	PARN	91	79.661	Callithrix_jacchus
ENSPFOG00000012823	parn	78	76.866	ENSCAFG00000018795	PARN	83	76.866	Canis_familiaris
ENSPFOG00000012823	parn	78	77.052	ENSCAFG00020024126	PARN	83	77.052	Canis_lupus_dingo
ENSPFOG00000012823	parn	84	72.635	ENSCHIG00000018143	PARN	90	73.540	Capra_hircus
ENSPFOG00000012823	parn	69	51.143	ENSCAPG00000007984	PARN	78	51.143	Cavia_aperea
ENSPFOG00000012823	parn	84	71.501	ENSCPOG00000002263	PARN	91	72.384	Cavia_porcellus
ENSPFOG00000012823	parn	84	72.727	ENSCCAG00000030367	PARN	91	79.661	Cebus_capucinus
ENSPFOG00000012823	parn	78	77.425	ENSCATG00000041368	PARN	95	77.425	Cercocebus_atys
ENSPFOG00000012823	parn	84	73.142	ENSCLAG00000015406	PARN	90	73.966	Chinchilla_lanigera
ENSPFOG00000012823	parn	84	72.727	ENSCSAG00000008142	PARN	83	77.799	Chlorocebus_sabaeus
ENSPFOG00000012823	parn	82	56.822	ENSCHOG00000007014	PARN	90	56.969	Choloepus_hoffmanni
ENSPFOG00000012823	parn	74	73.092	ENSCPBG00000006609	PARN	89	73.218	Chrysemys_picta_bellii
ENSPFOG00000012823	parn	75	40.824	ENSCING00000010142	-	99	40.525	Ciona_intestinalis
ENSPFOG00000012823	parn	84	62.109	ENSCANG00000028849	-	76	79.661	Colobus_angolensis_palliatus
ENSPFOG00000012823	parn	83	73.183	ENSCGRG00001012096	Parn	84	76.493	Cricetulus_griseus_chok1gshd
ENSPFOG00000012823	parn	83	73.183	ENSCGRG00000004939	Parn	84	76.493	Cricetulus_griseus_crigri
ENSPFOG00000012823	parn	100	78.748	ENSCSEG00000002064	parn	100	78.748	Cynoglossus_semilaevis
ENSPFOG00000012823	parn	100	90.776	ENSCVAG00000014848	parn	100	90.776	Cyprinodon_variegatus
ENSPFOG00000012823	parn	100	66.427	ENSDARG00000102634	parn	100	67.593	Danio_rerio
ENSPFOG00000012823	parn	84	72.420	ENSDNOG00000000833	PARN	94	77.425	Dasypus_novemcinctus
ENSPFOG00000012823	parn	61	74.242	ENSETEG00000014828	-	69	74.242	Echinops_telfairi
ENSPFOG00000012823	parn	83	72.899	ENSEASG00005011400	PARN	90	72.978	Equus_asinus_asinus
ENSPFOG00000012823	parn	83	72.727	ENSECAG00000017792	PARN	90	72.806	Equus_caballus
ENSPFOG00000012823	parn	62	79.630	ENSEEUG00000010370	PARN	70	63.514	Erinaceus_europaeus
ENSPFOG00000012823	parn	100	73.401	ENSELUG00000013139	parn	90	73.217	Esox_lucius
ENSPFOG00000012823	parn	84	71.812	ENSFCAG00000044961	PARN	83	77.799	Felis_catus
ENSPFOG00000012823	parn	83	72.184	ENSFALG00000003911	PARN	98	64.106	Ficedula_albicollis
ENSPFOG00000012823	parn	84	72.318	ENSFDAG00000009234	PARN	90	73.621	Fukomys_damarensis
ENSPFOG00000012823	parn	87	86.555	ENSFHEG00000013738	parn	92	96.610	Fundulus_heteroclitus
ENSPFOG00000012823	parn	81	82.577	ENSGMOG00000003231	parn	99	82.577	Gadus_morhua
ENSPFOG00000012823	parn	90	68.438	ENSGALG00000003091	PARN	84	76.866	Gallus_gallus
ENSPFOG00000012823	parn	100	97.080	ENSGAFG00000011061	parn	100	97.080	Gambusia_affinis
ENSPFOG00000012823	parn	84	82.872	ENSGACG00000019501	parn	100	74.530	Gasterosteus_aculeatus
ENSPFOG00000012823	parn	84	72.896	ENSGGOG00000025224	PARN	91	79.661	Gorilla_gorilla
ENSPFOG00000012823	parn	100	85.255	ENSHBUG00000017906	parn	100	85.255	Haplochromis_burtoni
ENSPFOG00000012823	parn	84	72.635	ENSHGLG00000010886	PARN	91	73.070	Heterocephalus_glaber_female
ENSPFOG00000012823	parn	84	72.635	ENSHGLG00100014659	PARN	91	73.070	Heterocephalus_glaber_male
ENSPFOG00000012823	parn	81	80.182	ENSHCOG00000008683	parn	95	80.182	Hippocampus_comes
ENSPFOG00000012823	parn	100	59.798	ENSIPUG00000012401	parn	100	59.712	Ictalurus_punctatus
ENSPFOG00000012823	parn	83	72.526	ENSSTOG00000007519	PARN	91	72.526	Ictidomys_tridecemlineatus
ENSPFOG00000012823	parn	84	72.355	ENSJJAG00000023049	Parn	90	72.917	Jaculus_jaculus
ENSPFOG00000012823	parn	100	86.823	ENSKMAG00000009462	parn	100	86.091	Kryptolebias_marmoratus
ENSPFOG00000012823	parn	93	84.169	ENSLBEG00000009167	parn	99	84.169	Labrus_bergylta
ENSPFOG00000012823	parn	73	73.810	ENSLACG00000004207	PARN	100	72.642	Latimeria_chalumnae
ENSPFOG00000012823	parn	100	68.580	ENSLOCG00000000715	parn	100	68.436	Lepisosteus_oculatus
ENSPFOG00000012823	parn	84	73.242	ENSLAFG00000015036	PARN	90	73.997	Loxodonta_africana
ENSPFOG00000012823	parn	84	69.360	ENSMFAG00000044852	PARN	89	72.467	Macaca_fascicularis
ENSPFOG00000012823	parn	84	72.559	ENSMMUG00000018849	PARN	83	77.612	Macaca_mulatta
ENSPFOG00000012823	parn	84	72.727	ENSMNEG00000045108	PARN	83	77.799	Macaca_nemestrina
ENSPFOG00000012823	parn	84	72.559	ENSMLEG00000031743	PARN	83	77.612	Mandrillus_leucophaeus
ENSPFOG00000012823	parn	100	83.697	ENSMAMG00000006939	parn	100	83.552	Mastacembelus_armatus
ENSPFOG00000012823	parn	100	84.672	ENSMZEG00005013590	parn	100	85.109	Maylandia_zebra
ENSPFOG00000012823	parn	82	70.364	ENSMGAG00000001004	PARN	82	74.621	Meleagris_gallopavo
ENSPFOG00000012823	parn	83	67.291	ENSMAUG00000008025	Parn	90	67.526	Mesocricetus_auratus
ENSPFOG00000012823	parn	84	72.391	ENSMICG00000016053	PARN	91	77.966	Microcebus_murinus
ENSPFOG00000012823	parn	72	78.384	ENSMOCG00000022211	Parn	100	78.384	Microtus_ochrogaster
ENSPFOG00000012823	parn	81	85.714	ENSMMOG00000011333	parn	90	85.714	Mola_mola
ENSPFOG00000012823	parn	72	80.483	ENSMODG00000004915	PARN	99	80.483	Monodelphis_domestica
ENSPFOG00000012823	parn	96	83.866	ENSMALG00000019426	parn	94	88.628	Monopterus_albus
ENSPFOG00000012823	parn	83	72.289	MGP_CAROLIEiJ_G0020466	Parn	90	72.300	Mus_caroli
ENSPFOG00000012823	parn	83	72.117	ENSMUSG00000022685	Parn	100	74.390	Mus_musculus
ENSPFOG00000012823	parn	82	72.648	MGP_PahariEiJ_G0016172	Parn	90	72.648	Mus_pahari
ENSPFOG00000012823	parn	83	72.461	MGP_SPRETEiJ_G0021361	Parn	89	73.252	Mus_spretus
ENSPFOG00000012823	parn	84	71.912	ENSMPUG00000014464	PARN	90	72.978	Mustela_putorius_furo
ENSPFOG00000012823	parn	72	77.576	ENSMLUG00000005414	PARN	100	77.576	Myotis_lucifugus
ENSPFOG00000012823	parn	81	88.246	ENSNBRG00000006805	parn	93	88.246	Neolamprologus_brichardi
ENSPFOG00000012823	parn	84	72.896	ENSNLEG00000010241	PARN	91	79.661	Nomascus_leucogenys
ENSPFOG00000012823	parn	69	65.000	ENSMEUG00000008178	-	74	65.000	Notamacropus_eugenii
ENSPFOG00000012823	parn	82	68.048	ENSOPRG00000012187	PARN	90	68.293	Ochotona_princeps
ENSPFOG00000012823	parn	84	67.876	ENSODEG00000001617	PARN	90	68.717	Octodon_degus
ENSPFOG00000012823	parn	100	85.255	ENSONIG00000000151	parn	100	85.255	Oreochromis_niloticus
ENSPFOG00000012823	parn	83	72.308	ENSOCUG00000000322	PARN	90	73.043	Oryctolagus_cuniculus
ENSPFOG00000012823	parn	100	81.871	ENSORLG00020010313	parn	100	82.018	Oryzias_latipes_hni
ENSPFOG00000012823	parn	100	81.725	ENSORLG00015000300	parn	100	82.164	Oryzias_latipes_hsok
ENSPFOG00000012823	parn	100	80.876	ENSOMEG00000019555	parn	100	81.314	Oryzias_melastigma
ENSPFOG00000012823	parn	72	77.621	ENSOGAG00000014626	PARN	100	77.621	Otolemur_garnettii
ENSPFOG00000012823	parn	72	79.596	ENSOARG00000007574	PARN	100	79.596	Ovis_aries
ENSPFOG00000012823	parn	84	72.727	ENSPPAG00000031438	PARN	91	79.661	Pan_paniscus
ENSPFOG00000012823	parn	84	71.812	ENSPPRG00000018583	PARN	83	77.799	Panthera_pardus
ENSPFOG00000012823	parn	84	71.812	ENSPTIG00000012135	PARN	83	77.799	Panthera_tigris_altaica
ENSPFOG00000012823	parn	84	72.727	ENSPTRG00000007792	PARN	91	79.661	Pan_troglodytes
ENSPFOG00000012823	parn	84	70.202	ENSPANG00000020099	PARN	83	74.813	Papio_anubis
ENSPFOG00000012823	parn	99	67.994	ENSPKIG00000022807	parn	96	67.094	Paramormyrops_kingsleyae
ENSPFOG00000012823	parn	83	73.345	ENSPSIG00000014804	PARN	90	73.630	Pelodiscus_sinensis
ENSPFOG00000012823	parn	90	75.935	ENSPMGG00000014431	parn	85	76.260	Periophthalmus_magnuspinnatus
ENSPFOG00000012823	parn	83	71.057	ENSPEMG00000018439	Parn	90	71.329	Peromyscus_maniculatus_bairdii
ENSPFOG00000012823	parn	76	68.786	ENSPMAG00000003956	parn	98	68.786	Petromyzon_marinus
ENSPFOG00000012823	parn	62	71.934	ENSPCIG00000001259	PARN	91	79.661	Phascolarctos_cinereus
ENSPFOG00000012823	parn	100	99.707	ENSPLAG00000006395	parn	100	99.707	Poecilia_latipinna
ENSPFOG00000012823	parn	100	99.414	ENSPMEG00000007711	parn	100	99.414	Poecilia_mexicana
ENSPFOG00000012823	parn	100	98.536	ENSPREG00000000147	parn	100	98.536	Poecilia_reticulata
ENSPFOG00000012823	parn	84	72.315	ENSPPYG00000007123	PARN	83	77.323	Pongo_abelii
ENSPFOG00000012823	parn	79	62.679	ENSPCAG00000001741	PARN	82	67.396	Procavia_capensis
ENSPFOG00000012823	parn	84	69.580	ENSPCOG00000019292	PARN	91	77.966	Propithecus_coquereli
ENSPFOG00000012823	parn	83	69.060	ENSPVAG00000002547	PARN	83	74.291	Pteropus_vampyrus
ENSPFOG00000012823	parn	100	84.964	ENSPNYG00000006835	parn	100	84.964	Pundamilia_nyererei
ENSPFOG00000012823	parn	93	69.315	ENSPNAG00000018905	parn	100	69.315	Pygocentrus_nattereri
ENSPFOG00000012823	parn	100	63.920	ENSRNOG00000002912	Parn	96	77.551	Rattus_norvegicus
ENSPFOG00000012823	parn	84	70.875	ENSSBOG00000034726	PARN	83	75.746	Saimiri_boliviensis_boliviensis
ENSPFOG00000012823	parn	61	78.947	ENSSHAG00000008493	PARN	93	78.947	Sarcophilus_harrisii
ENSPFOG00000012823	parn	100	68.616	ENSSFOG00015014165	parn	98	72.333	Scleropages_formosus
ENSPFOG00000012823	parn	100	80.544	ENSSMAG00000000685	parn	100	80.544	Scophthalmus_maximus
ENSPFOG00000012823	parn	100	84.593	ENSSDUG00000014555	parn	100	85.029	Seriola_dumerili
ENSPFOG00000012823	parn	64	79.310	ENSSARG00000014339	PARN	75	79.310	Sorex_araneus
ENSPFOG00000012823	parn	84	72.542	ENSSPUG00000007719	PARN	90	73.103	Sphenodon_punctatus
ENSPFOG00000012823	parn	100	85.547	ENSSPAG00000007095	parn	100	85.547	Stegastes_partitus
ENSPFOG00000012823	parn	83	73.103	ENSSSCG00000007878	PARN	80	73.103	Sus_scrofa
ENSPFOG00000012823	parn	85	70.647	ENSTGUG00000004971	PARN	82	77.170	Taeniopygia_guttata
ENSPFOG00000012823	parn	83	85.263	ENSTNIG00000008252	parn	100	74.564	Tetraodon_nigroviridis
ENSPFOG00000012823	parn	75	61.236	ENSTBEG00000010407	PARN	89	61.877	Tupaia_belangeri
ENSPFOG00000012823	parn	71	78.645	ENSTTRG00000002843	PARN	77	78.645	Tursiops_truncatus
ENSPFOG00000012823	parn	64	69.336	ENSUAMG00000008283	PARN	94	65.675	Ursus_americanus
ENSPFOG00000012823	parn	78	77.799	ENSUMAG00000004527	PARN	83	77.799	Ursus_maritimus
ENSPFOG00000012823	parn	83	69.506	ENSVPAG00000008968	PARN	93	70.364	Vicugna_pacos
ENSPFOG00000012823	parn	78	77.239	ENSVVUG00000019509	PARN	83	77.239	Vulpes_vulpes
ENSPFOG00000012823	parn	78	74.906	ENSXETG00000010994	parn	100	74.906	Xenopus_tropicalis
ENSPFOG00000012823	parn	87	91.611	ENSXCOG00000015990	parn	100	91.611	Xiphophorus_couchianus
ENSPFOG00000012823	parn	100	96.633	ENSXMAG00000014783	parn	100	96.633	Xiphophorus_maculatus