EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPFOG00000012930 (Gene tree)
Gene ID: 103137716
Gene Symbol: -
Alias: -
Full Name: transcription activator BRG1-like
Gene Type: protein_coding
Species: Poecilia_formosa
Status: putative
Strand: Plus strand
Length: 18845 bases
Position: chrKI519653.1:544189-563033
Accession: 103137716
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPFOP00000013071	ResIII	PF04851.15	1.7e-08	1	1
ENSPFOP00000013071	BRK	PF07533.16	5.7e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPFOT00000013089	-	7544	-	ENSPFOP00000013071	1667 (aa)	XP_007551646	A0A087Y4W8

Gene Model

Click here to download ENSPFOG00000012930's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000012930's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPFOG00000012930	-	99	82.033	ENSPFOG00000007892	smarca4a	100	82.629
ENSPFOG00000012930	-	99	69.903	ENSPFOG00000001856	SMARCA2	95	69.712

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPFOG00000012930	-	99	83.562	ENSG00000127616	SMARCA4	99	95.652	Homo_sapiens
ENSPFOG00000012930	-	95	95.175	ENSAPOG00000004542	SMARCA4	98	95.175	Acanthochromis_polyacanthus
ENSPFOG00000012930	-	74	88.381	ENSAPOG00000003509	smarca4a	98	86.991	Acanthochromis_polyacanthus
ENSPFOG00000012930	-	99	80.796	ENSAMEG00000010868	SMARCA4	100	80.925	Ailuropoda_melanoleuca
ENSPFOG00000012930	-	99	85.064	ENSACIG00000021550	smarca4a	98	84.951	Amphilophus_citrinellus
ENSPFOG00000012930	-	95	88.013	ENSACIG00000003035	-	84	96.468	Amphilophus_citrinellus
ENSPFOG00000012930	-	94	90.816	ENSAOCG00000009450	-	97	92.538	Amphiprion_ocellaris
ENSPFOG00000012930	-	90	81.271	ENSAOCG00000019167	smarca4a	83	90.986	Amphiprion_ocellaris
ENSPFOG00000012930	-	90	81.337	ENSAPEG00000015559	smarca4a	83	91.071	Amphiprion_percula
ENSPFOG00000012930	-	100	94.706	ENSAPEG00000023108	-	100	94.405	Amphiprion_percula
ENSPFOG00000012930	-	99	84.757	ENSATEG00000011524	smarca4a	100	84.988	Anabas_testudineus
ENSPFOG00000012930	-	99	93.390	ENSATEG00000001094	-	95	93.093	Anabas_testudineus
ENSPFOG00000012930	-	99	83.696	ENSANAG00000036991	SMARCA4	100	80.889	Aotus_nancymaae
ENSPFOG00000012930	-	95	94.906	ENSACLG00000008638	-	98	94.340	Astatotilapia_calliptera
ENSPFOG00000012930	-	99	83.816	ENSACLG00000000163	smarca4a	96	85.213	Astatotilapia_calliptera
ENSPFOG00000012930	-	97	78.944	ENSAMXG00000021023	smarca4a	95	88.476	Astyanax_mexicanus
ENSPFOG00000012930	-	94	86.785	ENSAMXG00000011238	-	98	86.078	Astyanax_mexicanus
ENSPFOG00000012930	-	99	83.621	ENSBTAG00000019220	SMARCA4	100	83.642	Bos_taurus
ENSPFOG00000012930	-	97	86.571	ENSCJAG00000005936	SMARCA4	95	86.998	Callithrix_jacchus
ENSPFOG00000012930	-	99	83.681	ENSCAFG00000017584	SMARCA4	100	83.821	Canis_familiaris
ENSPFOG00000012930	-	99	83.681	ENSCAFG00020024620	SMARCA4	99	83.821	Canis_lupus_dingo
ENSPFOG00000012930	-	99	80.083	ENSCHIG00000015318	SMARCA4	100	79.905	Capra_hircus
ENSPFOG00000012930	-	99	83.701	ENSTSYG00000012966	SMARCA4	100	83.821	Carlito_syrichta
ENSPFOG00000012930	-	94	77.255	ENSCAPG00000015932	SMARCA4	93	89.587	Cavia_aperea
ENSPFOG00000012930	-	99	84.220	ENSCPOG00000015549	SMARCA4	100	84.000	Cavia_porcellus
ENSPFOG00000012930	-	99	80.735	ENSCCAG00000031660	SMARCA4	99	80.927	Cebus_capucinus
ENSPFOG00000012930	-	99	83.562	ENSCATG00000029530	SMARCA4	100	83.701	Cercocebus_atys
ENSPFOG00000012930	-	99	83.642	ENSCLAG00000011946	SMARCA4	100	83.821	Chinchilla_lanigera
ENSPFOG00000012930	-	99	82.800	ENSCPBG00000009994	SMARCA4	100	83.652	Chrysemys_picta_bellii
ENSPFOG00000012930	-	99	83.502	ENSCANG00000036013	SMARCA4	100	83.701	Colobus_angolensis_palliatus
ENSPFOG00000012930	-	99	83.433	ENSCGRG00001016732	Smarca4	100	83.582	Cricetulus_griseus_chok1gshd
ENSPFOG00000012930	-	99	83.433	ENSCGRG00000017242	Smarca4	100	83.582	Cricetulus_griseus_crigri
ENSPFOG00000012930	-	97	83.478	ENSCSEG00000014771	smarca4a	100	83.653	Cynoglossus_semilaevis
ENSPFOG00000012930	-	99	80.762	ENSCVAG00000006979	smarca4a	99	83.656	Cyprinodon_variegatus
ENSPFOG00000012930	-	99	91.312	ENSCVAG00000003018	-	99	92.331	Cyprinodon_variegatus
ENSPFOG00000012930	-	92	83.917	ENSDARG00000104339	SMARCA4	94	83.821	Danio_rerio
ENSPFOG00000012930	-	99	85.210	ENSDARG00000077226	smarca4a	100	83.929	Danio_rerio
ENSPFOG00000012930	-	96	83.582	ENSDNOG00000048847	SMARCA4	90	90.118	Dasypus_novemcinctus
ENSPFOG00000012930	-	86	78.681	ENSDORG00000002544	Smarca4	91	79.152	Dipodomys_ordii
ENSPFOG00000012930	-	94	73.533	ENSETEG00000013361	SMARCA4	94	73.483	Echinops_telfairi
ENSPFOG00000012930	-	99	83.522	ENSEASG00005006167	SMARCA4	97	85.811	Equus_asinus_asinus
ENSPFOG00000012930	-	99	83.857	ENSECAG00000008334	SMARCA4	100	83.642	Equus_caballus
ENSPFOG00000012930	-	95	81.563	ENSELUG00000023232	-	92	87.027	Esox_lucius
ENSPFOG00000012930	-	99	83.026	ENSELUG00000010247	smarca4a	100	82.409	Esox_lucius
ENSPFOG00000012930	-	99	83.650	ENSFCAG00000004894	SMARCA4	100	83.731	Felis_catus
ENSPFOG00000012930	-	84	90.849	ENSFALG00000004208	SMARCA4	95	81.069	Ficedula_albicollis
ENSPFOG00000012930	-	92	84.101	ENSFDAG00000012237	SMARCA4	97	84.296	Fukomys_damarensis
ENSPFOG00000012930	-	96	82.407	ENSFHEG00000010182	smarca4a	99	85.918	Fundulus_heteroclitus
ENSPFOG00000012930	-	100	98.263	ENSFHEG00000007902	-	100	98.263	Fundulus_heteroclitus
ENSPFOG00000012930	-	87	80.061	ENSGMOG00000002649	smarca4a	90	83.313	Gadus_morhua
ENSPFOG00000012930	-	93	85.150	ENSGMOG00000005756	-	86	85.185	Gadus_morhua
ENSPFOG00000012930	-	73	81.502	ENSGALG00000047145	SMARCA4	100	82.535	Gallus_gallus
ENSPFOG00000012930	-	99	89.605	ENSGAFG00000008827	-	98	88.578	Gambusia_affinis
ENSPFOG00000012930	-	87	88.211	ENSGAFG00000014900	smarca4a	97	87.989	Gambusia_affinis
ENSPFOG00000012930	-	96	84.220	ENSGACG00000006691	smarca4a	100	82.437	Gasterosteus_aculeatus
ENSPFOG00000012930	-	99	85.255	ENSGACG00000016033	-	100	84.669	Gasterosteus_aculeatus
ENSPFOG00000012930	-	99	82.888	ENSGAGG00000016757	SMARCA4	100	83.742	Gopherus_agassizii
ENSPFOG00000012930	-	99	83.562	ENSGGOG00000009882	SMARCA4	100	83.701	Gorilla_gorilla
ENSPFOG00000012930	-	99	84.555	ENSHBUG00000021172	smarca4a	100	84.794	Haplochromis_burtoni
ENSPFOG00000012930	-	100	94.551	ENSHBUG00000005447	-	100	94.132	Haplochromis_burtoni
ENSPFOG00000012930	-	99	83.710	ENSHGLG00000010519	SMARCA4	100	83.591	Heterocephalus_glaber_female
ENSPFOG00000012930	-	99	83.502	ENSHGLG00100013774	SMARCA4	100	83.274	Heterocephalus_glaber_male
ENSPFOG00000012930	-	95	82.328	ENSHCOG00000009510	smarca4a	96	85.274	Hippocampus_comes
ENSPFOG00000012930	-	99	85.159	ENSIPUG00000006107	smarca4a	100	85.081	Ictalurus_punctatus
ENSPFOG00000012930	-	98	83.912	ENSIPUG00000016346	-	89	89.629	Ictalurus_punctatus
ENSPFOG00000012930	-	99	83.761	ENSSTOG00000007939	SMARCA4	100	83.761	Ictidomys_tridecemlineatus
ENSPFOG00000012930	-	99	82.294	ENSJJAG00000012877	Smarca4	100	82.412	Jaculus_jaculus
ENSPFOG00000012930	-	99	82.909	ENSKMAG00000011931	smarca4a	88	88.235	Kryptolebias_marmoratus
ENSPFOG00000012930	-	100	96.463	ENSKMAG00000019518	-	100	96.463	Kryptolebias_marmoratus
ENSPFOG00000012930	-	84	86.395	ENSLBEG00000020655	-	82	85.868	Labrus_bergylta
ENSPFOG00000012930	-	95	81.795	ENSLBEG00000017383	smarca4a	97	81.101	Labrus_bergylta
ENSPFOG00000012930	-	99	81.411	ENSLOCG00000007820	smarca4a	89	83.753	Lepisosteus_oculatus
ENSPFOG00000012930	-	99	83.591	ENSLAFG00000001433	SMARCA4	100	83.671	Loxodonta_africana
ENSPFOG00000012930	-	99	83.562	ENSMFAG00000032146	SMARCA4	99	83.701	Macaca_fascicularis
ENSPFOG00000012930	-	99	83.562	ENSMMUG00000012042	SMARCA4	99	88.800	Macaca_mulatta
ENSPFOG00000012930	-	99	83.571	ENSMNEG00000028512	SMARCA4	100	83.642	Macaca_nemestrina
ENSPFOG00000012930	-	99	83.502	ENSMLEG00000034976	SMARCA4	100	83.492	Mandrillus_leucophaeus
ENSPFOG00000012930	-	100	94.212	ENSMAMG00000002841	-	100	93.914	Mastacembelus_armatus
ENSPFOG00000012930	-	96	87.984	ENSMAMG00000009256	smarca4a	98	88.873	Mastacembelus_armatus
ENSPFOG00000012930	-	99	84.399	ENSMZEG00005003889	smarca4a	100	84.684	Maylandia_zebra
ENSPFOG00000012930	-	95	94.644	ENSMZEG00005023861	-	98	94.203	Maylandia_zebra
ENSPFOG00000012930	-	99	83.403	ENSMAUG00000020731	Smarca4	100	83.492	Mesocricetus_auratus
ENSPFOG00000012930	-	99	83.492	ENSMICG00000009806	SMARCA4	100	83.690	Microcebus_murinus
ENSPFOG00000012930	-	99	83.046	ENSMOCG00000022209	Smarca4	100	83.313	Microtus_ochrogaster
ENSPFOG00000012930	-	95	82.724	ENSMMOG00000007571	smarca4a	98	83.806	Mola_mola
ENSPFOG00000012930	-	99	81.946	ENSMODG00000006287	SMARCA4	100	82.734	Monodelphis_domestica
ENSPFOG00000012930	-	90	86.533	ENSMALG00000021534	-	96	95.674	Monopterus_albus
ENSPFOG00000012930	-	95	83.177	ENSMALG00000003388	smarca4a	100	84.069	Monopterus_albus
ENSPFOG00000012930	-	99	83.443	MGP_CAROLIEiJ_G0031879	Smarca4	100	86.850	Mus_caroli
ENSPFOG00000012930	-	99	83.443	ENSMUSG00000032187	Smarca4	99	86.850	Mus_musculus
ENSPFOG00000012930	-	99	83.204	MGP_PahariEiJ_G0014745	Smarca4	100	86.535	Mus_pahari
ENSPFOG00000012930	-	99	83.443	MGP_SPRETEiJ_G0033003	Smarca4	100	86.850	Mus_spretus
ENSPFOG00000012930	-	99	83.681	ENSMPUG00000005711	SMARCA4	100	83.761	Mustela_putorius_furo
ENSPFOG00000012930	-	99	84.000	ENSMLUG00000004491	-	100	83.881	Myotis_lucifugus
ENSPFOG00000012930	-	99	83.642	ENSNGAG00000021852	Smarca4	100	83.463	Nannospalax_galili
ENSPFOG00000012930	-	90	86.907	ENSNBRG00000018865	-	99	88.286	Neolamprologus_brichardi
ENSPFOG00000012930	-	95	82.136	ENSNBRG00000011457	smarca4a	81	91.383	Neolamprologus_brichardi
ENSPFOG00000012930	-	95	80.824	ENSNLEG00000012389	SMARCA4	94	80.967	Nomascus_leucogenys
ENSPFOG00000012930	-	77	96.552	ENSOPRG00000000885	-	76	96.552	Ochotona_princeps
ENSPFOG00000012930	-	99	82.007	ENSODEG00000017127	SMARCA4	84	89.583	Octodon_degus
ENSPFOG00000012930	-	99	84.510	ENSONIG00000008196	smarca4a	89	88.981	Oreochromis_niloticus
ENSPFOG00000012930	-	99	94.727	ENSONIG00000018040	-	100	94.308	Oreochromis_niloticus
ENSPFOG00000012930	-	98	78.298	ENSOCUG00000001787	SMARCA4	98	77.406	Oryctolagus_cuniculus
ENSPFOG00000012930	-	97	92.959	ENSORLG00000003955	-	100	92.891	Oryzias_latipes
ENSPFOG00000012930	-	96	81.990	ENSORLG00000015452	smarca4a	88	88.438	Oryzias_latipes
ENSPFOG00000012930	-	97	92.901	ENSORLG00020009728	-	100	92.836	Oryzias_latipes_hni
ENSPFOG00000012930	-	96	83.757	ENSORLG00020004611	smarca4a	88	88.438	Oryzias_latipes_hni
ENSPFOG00000012930	-	96	83.881	ENSORLG00015016560	smarca4a	98	80.168	Oryzias_latipes_hsok
ENSPFOG00000012930	-	100	92.234	ENSORLG00015007739	-	100	92.413	Oryzias_latipes_hsok
ENSPFOG00000012930	-	97	93.263	ENSOMEG00000016626	-	100	93.126	Oryzias_melastigma
ENSPFOG00000012930	-	99	82.124	ENSOMEG00000007486	smarca4a	88	88.483	Oryzias_melastigma
ENSPFOG00000012930	-	90	82.990	ENSOGAG00000016148	SMARCA4	100	82.591	Otolemur_garnettii
ENSPFOG00000012930	-	99	83.026	ENSOARG00000017454	SMARCA4	96	83.406	Ovis_aries
ENSPFOG00000012930	-	99	83.562	ENSPPAG00000043191	SMARCA4	100	83.701	Pan_paniscus
ENSPFOG00000012930	-	99	83.650	ENSPPRG00000000064	SMARCA4	100	83.731	Panthera_pardus
ENSPFOG00000012930	-	93	85.843	ENSPTIG00000017447	SMARCA4	97	84.017	Panthera_tigris_altaica
ENSPFOG00000012930	-	99	83.562	ENSPTRG00000010488	SMARCA4	100	83.701	Pan_troglodytes
ENSPFOG00000012930	-	99	83.621	ENSPANG00000011042	SMARCA4	99	83.761	Papio_anubis
ENSPFOG00000012930	-	97	85.342	ENSPKIG00000010087	-	97	84.387	Paramormyrops_kingsleyae
ENSPFOG00000012930	-	99	86.667	ENSPKIG00000007770	SMARCA4	100	86.236	Paramormyrops_kingsleyae
ENSPFOG00000012930	-	99	77.739	ENSPSIG00000005547	SMARCA4	86	86.308	Pelodiscus_sinensis
ENSPFOG00000012930	-	99	83.224	ENSPEMG00000020389	Smarca4	100	83.373	Peromyscus_maniculatus_bairdii
ENSPFOG00000012930	-	99	82.996	ENSPCIG00000017138	SMARCA4	100	83.861	Phascolarctos_cinereus
ENSPFOG00000012930	-	99	82.339	ENSPLAG00000014294	smarca4a	96	87.751	Poecilia_latipinna
ENSPFOG00000012930	-	99	94.358	ENSPLAG00000018616	-	99	95.665	Poecilia_latipinna
ENSPFOG00000012930	-	95	83.189	ENSPMEG00000003725	smarca4a	96	83.417	Poecilia_mexicana
ENSPFOG00000012930	-	97	99.193	ENSPMEG00000008929	-	98	99.296	Poecilia_mexicana
ENSPFOG00000012930	-	99	82.450	ENSPREG00000014608	smarca4a	88	86.885	Poecilia_reticulata
ENSPFOG00000012930	-	97	99.379	ENSPREG00000014823	-	98	99.379	Poecilia_reticulata
ENSPFOG00000012930	-	99	82.394	ENSPPYG00000009568	SMARCA4	100	82.529	Pongo_abelii
ENSPFOG00000012930	-	79	80.795	ENSPCAG00000014054	SMARCA4	77	80.132	Procavia_capensis
ENSPFOG00000012930	-	99	83.522	ENSPCOG00000023011	SMARCA4	100	83.571	Propithecus_coquereli
ENSPFOG00000012930	-	96	75.690	ENSPVAG00000007787	SMARCA4	96	74.828	Pteropus_vampyrus
ENSPFOG00000012930	-	95	86.435	ENSPNYG00000023995	-	99	89.448	Pundamilia_nyererei
ENSPFOG00000012930	-	99	81.851	ENSPNYG00000000717	smarca4a	96	85.266	Pundamilia_nyererei
ENSPFOG00000012930	-	95	86.244	ENSPNAG00000006636	-	93	87.524	Pygocentrus_nattereri
ENSPFOG00000012930	-	99	83.443	ENSRNOG00000009271	Smarca4	100	83.463	Rattus_norvegicus
ENSPFOG00000012930	-	99	83.443	ENSRBIG00000038696	SMARCA4	99	83.582	Rhinopithecus_bieti
ENSPFOG00000012930	-	99	83.502	ENSRROG00000045509	SMARCA4	100	83.642	Rhinopithecus_roxellana
ENSPFOG00000012930	-	99	83.857	ENSSBOG00000026896	SMARCA4	99	83.857	Saimiri_boliviensis_boliviensis
ENSPFOG00000012930	-	99	82.759	ENSSHAG00000001642	SMARCA4	100	83.742	Sarcophilus_harrisii
ENSPFOG00000012930	-	99	84.217	ENSSFOG00015013823	smarca4	88	89.187	Scleropages_formosus
ENSPFOG00000012930	-	96	78.293	ENSSFOG00015009921	-	89	90.896	Scleropages_formosus
ENSPFOG00000012930	-	99	84.455	ENSSMAG00000003200	smarca4a	100	83.859	Scophthalmus_maximus
ENSPFOG00000012930	-	100	91.512	ENSSMAG00000014082	-	100	91.751	Scophthalmus_maximus
ENSPFOG00000012930	-	99	93.803	ENSSDUG00000005388	-	98	95.104	Seriola_dumerili
ENSPFOG00000012930	-	99	79.929	ENSSDUG00000017298	smarca4a	100	79.405	Seriola_dumerili
ENSPFOG00000012930	-	95	91.299	ENSSLDG00000023663	-	99	92.986	Seriola_lalandi_dorsalis
ENSPFOG00000012930	-	99	84.735	ENSSLDG00000024486	smarca4a	100	84.735	Seriola_lalandi_dorsalis
ENSPFOG00000012930	-	61	97.516	ENSSARG00000013477	SMARCA4	82	97.516	Sorex_araneus
ENSPFOG00000012930	-	95	81.500	ENSSPUG00000004558	SMARCA4	98	81.129	Sphenodon_punctatus
ENSPFOG00000012930	-	100	94.712	ENSSPAG00000012533	-	100	94.831	Stegastes_partitus
ENSPFOG00000012930	-	99	84.317	ENSSPAG00000004248	smarca4a	100	84.377	Stegastes_partitus
ENSPFOG00000012930	-	99	83.710	ENSSSCG00000013629	SMARCA4	100	83.790	Sus_scrofa
ENSPFOG00000012930	-	50	85.142	ENSTGUG00000015488	-	99	85.159	Taeniopygia_guttata
ENSPFOG00000012930	-	97	91.124	ENSTRUG00000001378	SMARCA4	99	91.124	Takifugu_rubripes
ENSPFOG00000012930	-	90	79.600	ENSTRUG00000004885	smarca4a	100	79.214	Takifugu_rubripes
ENSPFOG00000012930	-	70	83.501	ENSTNIG00000004859	-	96	86.391	Tetraodon_nigroviridis
ENSPFOG00000012930	-	99	89.234	ENSTNIG00000004536	SMARCA4	100	88.517	Tetraodon_nigroviridis
ENSPFOG00000012930	-	50	100.000	ENSTBEG00000000707	-	52	100.000	Tupaia_belangeri
ENSPFOG00000012930	-	99	81.349	ENSTTRG00000009519	SMARCA4	100	81.353	Tursiops_truncatus
ENSPFOG00000012930	-	99	83.740	ENSUAMG00000014661	SMARCA4	100	83.821	Ursus_americanus
ENSPFOG00000012930	-	94	90.323	ENSUMAG00000022005	SMARCA4	98	90.030	Ursus_maritimus
ENSPFOG00000012930	-	99	83.681	ENSVVUG00000017820	SMARCA4	97	83.821	Vulpes_vulpes
ENSPFOG00000012930	-	99	78.861	ENSXETG00000009355	smarca4	90	84.032	Xenopus_tropicalis
ENSPFOG00000012930	-	99	88.335	ENSXCOG00000013494	-	93	99.296	Xiphophorus_couchianus
ENSPFOG00000012930	-	99	81.412	ENSXMAG00000006321	smarca4a	100	83.244	Xiphophorus_maculatus
ENSPFOG00000012930	-	100	98.740	ENSXMAG00000007030	-	100	98.740	Xiphophorus_maculatus