EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPFOG00000013109 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Poecilia_formosa
Status: putative
Strand: Plus strand
Length: 5481 bases
Position: chrKI519698.1:2155667-2161147
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPFOP00000022537	MMR_HSR1	PF01926.23	8.5e-13	1	1
ENSPFOP00000013110	MMR_HSR1	PF01926.23	4.5e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPFOT00000013128	-	2349	-	ENSPFOP00000013110	611 (aa)	-	A0A087Y507
ENSPFOT00000027926	-	2028	-	ENSPFOP00000022537	676 (aa)	-	A0A096LTP6

Gene Model

Click here to download ENSPFOG00000013109's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000013109's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPFOG00000013109	-	88	33.824	ENSPFOG00000023575	-	96	33.824
ENSPFOG00000013109	-	88	34.555	ENSPFOG00000022954	-	76	35.165
ENSPFOG00000013109	-	99	81.609	ENSPFOG00000012732	-	87	81.609
ENSPFOG00000013109	-	88	34.184	ENSPFOG00000018807	-	85	34.184
ENSPFOG00000013109	-	87	32.338	ENSPFOG00000009457	-	78	32.127
ENSPFOG00000013109	-	84	38.342	ENSPFOG00000013403	-	80	35.472
ENSPFOG00000013109	-	86	34.896	ENSPFOG00000022433	-	78	34.518
ENSPFOG00000013109	-	95	32.850	ENSPFOG00000000973	-	64	34.921
ENSPFOG00000013109	-	88	30.945	ENSPFOG00000000217	-	97	30.945
ENSPFOG00000013109	-	95	33.831	ENSPFOG00000021904	-	96	33.831
ENSPFOG00000013109	-	94	36.813	ENSPFOG00000023369	-	98	36.464
ENSPFOG00000013109	-	86	36.923	ENSPFOG00000001141	-	89	36.420
ENSPFOG00000013109	-	93	35.897	ENSPFOG00000001239	-	96	35.897
ENSPFOG00000013109	-	93	35.802	ENSPFOG00000002493	-	97	33.178
ENSPFOG00000013109	-	88	34.555	ENSPFOG00000000172	-	86	34.555
ENSPFOG00000013109	-	87	39.512	ENSPFOG00000020982	-	83	38.785
ENSPFOG00000013109	-	87	32.512	ENSPFOG00000020120	-	76	31.132
ENSPFOG00000013109	-	98	31.116	ENSPFOG00000022684	-	91	30.645
ENSPFOG00000013109	-	97	37.000	ENSPFOG00000008461	si:ch211-113e8.5	70	37.000
ENSPFOG00000013109	-	89	34.158	ENSPFOG00000003348	-	66	33.659
ENSPFOG00000013109	-	84	35.500	ENSPFOG00000023365	-	83	35.500
ENSPFOG00000013109	-	94	35.897	ENSPFOG00000024153	-	64	35.533
ENSPFOG00000013109	-	96	32.828	ENSPFOG00000024835	-	73	31.553
ENSPFOG00000013109	-	99	38.528	ENSPFOG00000016787	-	97	38.528
ENSPFOG00000013109	-	99	81.924	ENSPFOG00000013349	-	91	81.924
ENSPFOG00000013109	-	96	82.594	ENSPFOG00000015865	-	100	82.594
ENSPFOG00000013109	-	94	32.961	ENSPFOG00000022293	-	65	32.961
ENSPFOG00000013109	-	97	33.503	ENSPFOG00000010867	-	81	33.846
ENSPFOG00000013109	-	89	36.318	ENSPFOG00000020945	-	66	36.318
ENSPFOG00000013109	-	94	84.416	ENSPFOG00000022853	-	97	89.157
ENSPFOG00000013109	-	90	34.123	ENSPFOG00000001377	-	67	34.123
ENSPFOG00000013109	-	82	32.584	ENSPFOG00000024154	-	71	32.584
ENSPFOG00000013109	-	86	38.756	ENSPFOG00000019990	-	72	38.756
ENSPFOG00000013109	-	88	33.810	ENSPFOG00000000735	-	95	32.883
ENSPFOG00000013109	-	86	38.462	ENSPFOG00000023328	-	83	35.808
ENSPFOG00000013109	-	86	32.692	ENSPFOG00000001323	-	57	32.547
ENSPFOG00000013109	-	93	37.500	ENSPFOG00000006124	-	99	37.500
ENSPFOG00000013109	-	95	78.330	ENSPFOG00000015871	-	93	78.330
ENSPFOG00000013109	-	99	82.979	ENSPFOG00000015875	-	98	82.979
ENSPFOG00000013109	-	90	40.928	ENSPFOG00000005689	si:dkey-185m8.2	87	40.408
ENSPFOG00000013109	-	87	32.512	ENSPFOG00000020090	-	50	33.028
ENSPFOG00000013109	-	83	36.667	ENSPFOG00000022860	-	70	36.667
ENSPFOG00000013109	-	95	30.482	ENSPFOG00000001388	-	82	31.805
ENSPFOG00000013109	-	94	36.979	ENSPFOG00000004363	-	95	36.979
ENSPFOG00000013109	-	85	35.789	ENSPFOG00000004041	-	80	35.789
ENSPFOG00000013109	-	87	34.359	ENSPFOG00000001711	-	95	34.359
ENSPFOG00000013109	-	92	34.848	ENSPFOG00000000432	-	82	34.028
ENSPFOG00000013109	-	89	32.524	ENSPFOG00000018810	-	86	32.524
ENSPFOG00000013109	-	87	33.981	ENSPFOG00000020524	-	77	32.558
ENSPFOG00000013109	-	97	32.323	ENSPFOG00000000263	-	77	32.323
ENSPFOG00000013109	-	87	68.500	ENSPFOG00000022479	-	85	68.500
ENSPFOG00000013109	-	87	33.981	ENSPFOG00000020178	-	77	32.558
ENSPFOG00000013109	-	87	37.436	ENSPFOG00000001169	-	90	36.111
ENSPFOG00000013109	-	98	62.766	ENSPFOG00000000191	-	84	64.530
ENSPFOG00000013109	-	90	37.245	ENSPFOG00000023868	-	95	37.143
ENSPFOG00000013109	-	85	30.952	ENSPFOG00000001396	-	92	30.952
ENSPFOG00000013109	-	90	38.743	ENSPFOG00000021960	-	89	30.075
ENSPFOG00000013109	-	86	38.350	ENSPFOG00000020104	-	80	38.350
ENSPFOG00000013109	-	87	35.533	ENSPFOG00000004640	zgc:113625	83	35.071

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPFOG00000013109	-	94	35.294	ENSAPOG00000006502	-	60	33.236	Acanthochromis_polyacanthus
ENSPFOG00000013109	-	97	35.440	ENSAPOG00000019154	-	59	35.470	Acanthochromis_polyacanthus
ENSPFOG00000013109	-	80	37.017	ENSACIG00000007737	-	73	37.968	Amphilophus_citrinellus
ENSPFOG00000013109	-	85	39.899	ENSACIG00000009811	-	82	39.216	Amphilophus_citrinellus
ENSPFOG00000013109	-	92	43.069	ENSACIG00000007725	-	81	43.069	Amphilophus_citrinellus
ENSPFOG00000013109	-	99	40.632	ENSAOCG00000004579	-	93	40.618	Amphiprion_ocellaris
ENSPFOG00000013109	-	89	37.097	ENSAOCG00000003425	-	83	37.097	Amphiprion_ocellaris
ENSPFOG00000013109	-	94	40.972	ENSAPEG00000014403	-	70	42.105	Amphiprion_percula
ENSPFOG00000013109	-	97	37.109	ENSAPEG00000001491	-	70	37.109	Amphiprion_percula
ENSPFOG00000013109	-	99	37.500	ENSATEG00000015654	-	84	38.667	Anabas_testudineus
ENSPFOG00000013109	-	86	39.175	ENSATEG00000023053	-	91	39.175	Anabas_testudineus
ENSPFOG00000013109	-	99	38.739	ENSACLG00000014795	-	76	40.088	Astatotilapia_calliptera
ENSPFOG00000013109	-	95	40.610	ENSAMXG00000019109	-	99	40.610	Astyanax_mexicanus
ENSPFOG00000013109	-	99	36.508	ENSAMXG00000006064	-	84	34.722	Astyanax_mexicanus
ENSPFOG00000013109	-	99	40.278	ENSAMXG00000021387	-	82	35.227	Astyanax_mexicanus
ENSPFOG00000013109	-	82	36.318	ENSAMXG00000009216	-	94	36.318	Astyanax_mexicanus
ENSPFOG00000013109	-	93	35.047	ENSAMXG00000033117	-	97	36.410	Astyanax_mexicanus
ENSPFOG00000013109	-	82	41.709	ENSAMXG00000026085	-	81	41.063	Astyanax_mexicanus
ENSPFOG00000013109	-	98	37.778	ENSAMXG00000030744	-	95	39.752	Astyanax_mexicanus
ENSPFOG00000013109	-	95	37.261	ENSCSEG00000021519	-	81	43.396	Cynoglossus_semilaevis
ENSPFOG00000013109	-	99	39.167	ENSCVAG00000003054	-	91	38.235	Cyprinodon_variegatus
ENSPFOG00000013109	-	93	77.519	ENSCVAG00000012268	-	99	77.519	Cyprinodon_variegatus
ENSPFOG00000013109	-	97	54.113	ENSCVAG00000005778	-	92	52.427	Cyprinodon_variegatus
ENSPFOG00000013109	-	96	39.691	ENSDARG00000102683	CR626941.1	86	39.691	Danio_rerio
ENSPFOG00000013109	-	99	37.982	ENSDARG00000063481	si:ch211-214j24.15	68	41.361	Danio_rerio
ENSPFOG00000013109	-	83	49.727	ENSELUG00000024502	-	69	49.727	Esox_lucius
ENSPFOG00000013109	-	87	38.071	ENSELUG00000003217	-	85	38.071	Esox_lucius
ENSPFOG00000013109	-	85	46.073	ENSELUG00000018192	-	99	46.073	Esox_lucius
ENSPFOG00000013109	-	85	40.642	ENSELUG00000018709	-	68	40.642	Esox_lucius
ENSPFOG00000013109	-	86	43.781	ENSFHEG00000023334	-	78	43.781	Fundulus_heteroclitus
ENSPFOG00000013109	-	93	37.778	ENSFHEG00000020783	-	99	37.778	Fundulus_heteroclitus
ENSPFOG00000013109	-	85	41.063	ENSGMOG00000001626	-	100	44.505	Gadus_morhua
ENSPFOG00000013109	-	92	37.297	ENSGAFG00000020826	-	96	37.297	Gambusia_affinis
ENSPFOG00000013109	-	96	35.529	ENSHBUG00000008326	-	100	35.765	Haplochromis_burtoni
ENSPFOG00000013109	-	96	36.364	ENSHBUG00000001242	-	73	35.071	Haplochromis_burtoni
ENSPFOG00000013109	-	93	47.291	ENSHBUG00000016284	-	98	48.718	Haplochromis_burtoni
ENSPFOG00000013109	-	85	38.916	ENSIPUG00000013342	-	71	40.000	Ictalurus_punctatus
ENSPFOG00000013109	-	88	41.436	ENSKMAG00000014605	-	95	41.436	Kryptolebias_marmoratus
ENSPFOG00000013109	-	94	44.608	ENSKMAG00000009600	-	94	40.458	Kryptolebias_marmoratus
ENSPFOG00000013109	-	94	40.411	ENSKMAG00000004774	-	76	40.411	Kryptolebias_marmoratus
ENSPFOG00000013109	-	93	38.356	ENSKMAG00000014764	-	100	38.356	Kryptolebias_marmoratus
ENSPFOG00000013109	-	85	40.415	ENSLBEG00000019652	-	78	41.969	Labrus_bergylta
ENSPFOG00000013109	-	88	45.641	ENSLOCG00000000517	-	75	45.641	Lepisosteus_oculatus
ENSPFOG00000013109	-	87	44.388	ENSLOCG00000000385	-	92	40.435	Lepisosteus_oculatus
ENSPFOG00000013109	-	86	45.918	ENSLOCG00000012075	-	91	57.143	Lepisosteus_oculatus
ENSPFOG00000013109	-	89	45.833	ENSLOCG00000000082	-	92	45.098	Lepisosteus_oculatus
ENSPFOG00000013109	-	84	44.503	ENSLOCG00000000460	-	59	49.462	Lepisosteus_oculatus
ENSPFOG00000013109	-	95	43.750	ENSLOCG00000016496	-	73	39.271	Lepisosteus_oculatus
ENSPFOG00000013109	-	88	47.525	ENSLOCG00000018072	-	92	47.179	Lepisosteus_oculatus
ENSPFOG00000013109	-	85	49.485	ENSLOCG00000017852	-	85	58.333	Lepisosteus_oculatus
ENSPFOG00000013109	-	96	37.255	ENSMAMG00000021969	-	88	37.255	Mastacembelus_armatus
ENSPFOG00000013109	-	94	39.908	ENSMAMG00000015600	-	80	39.908	Mastacembelus_armatus
ENSPFOG00000013109	-	90	37.624	ENSMAMG00000021970	-	97	37.624	Mastacembelus_armatus
ENSPFOG00000013109	-	86	41.327	ENSMMOG00000012876	-	72	39.914	Mola_mola
ENSPFOG00000013109	-	77	41.667	ENSMMOG00000016860	-	71	39.316	Mola_mola
ENSPFOG00000013109	-	89	34.375	ENSMMOG00000016864	-	88	35.079	Mola_mola
ENSPFOG00000013109	-	92	39.604	ENSNBRG00000002136	-	80	37.021	Neolamprologus_brichardi
ENSPFOG00000013109	-	93	41.458	ENSORLG00000002031	-	69	41.053	Oryzias_latipes
ENSPFOG00000013109	-	94	36.269	ENSORLG00000002537	-	69	36.758	Oryzias_latipes
ENSPFOG00000013109	-	92	45.876	ENSORLG00000028011	-	51	45.876	Oryzias_latipes
ENSPFOG00000013109	-	98	38.479	ENSORLG00020011284	-	86	36.226	Oryzias_latipes_hni
ENSPFOG00000013109	-	88	32.836	ENSORLG00020017387	-	94	32.836	Oryzias_latipes_hni
ENSPFOG00000013109	-	93	41.686	ENSORLG00020008323	-	67	41.686	Oryzias_latipes_hni
ENSPFOG00000013109	-	94	41.053	ENSORLG00020008286	-	86	41.935	Oryzias_latipes_hni
ENSPFOG00000013109	-	93	41.913	ENSORLG00015004522	-	67	41.754	Oryzias_latipes_hsok
ENSPFOG00000013109	-	78	34.463	ENSORLG00015023234	-	95	34.463	Oryzias_latipes_hsok
ENSPFOG00000013109	-	96	36.788	ENSORLG00015004110	-	69	36.788	Oryzias_latipes_hsok
ENSPFOG00000013109	-	96	38.537	ENSOMEG00000020433	-	90	37.808	Oryzias_melastigma
ENSPFOG00000013109	-	95	39.568	ENSOMEG00000010594	-	94	39.618	Oryzias_melastigma
ENSPFOG00000013109	-	94	47.059	ENSPKIG00000017688	-	95	47.059	Paramormyrops_kingsleyae
ENSPFOG00000013109	-	86	47.917	ENSPKIG00000017193	-	87	47.917	Paramormyrops_kingsleyae
ENSPFOG00000013109	-	89	36.170	ENSPMGG00000014056	-	87	36.170	Periophthalmus_magnuspinnatus
ENSPFOG00000013109	-	87	43.523	ENSPMGG00000014055	-	97	41.204	Periophthalmus_magnuspinnatus
ENSPFOG00000013109	-	85	38.235	ENSPMGG00000017993	-	80	38.235	Periophthalmus_magnuspinnatus
ENSPFOG00000013109	-	96	89.815	ENSPLAG00000020776	-	91	89.815	Poecilia_latipinna
ENSPFOG00000013109	-	87	46.561	ENSPLAG00000018606	-	84	46.561	Poecilia_latipinna
ENSPFOG00000013109	-	82	37.368	ENSPLAG00000018911	-	71	37.368	Poecilia_latipinna
ENSPFOG00000013109	-	91	60.088	ENSPLAG00000018664	-	94	55.805	Poecilia_latipinna
ENSPFOG00000013109	-	95	73.333	ENSPLAG00000003020	-	94	80.667	Poecilia_latipinna
ENSPFOG00000013109	-	90	53.556	ENSPLAG00000018692	-	98	54.812	Poecilia_latipinna
ENSPFOG00000013109	-	99	38.528	ENSPMEG00000000604	-	92	37.247	Poecilia_mexicana
ENSPFOG00000013109	-	78	58.031	ENSPMEG00000010605	-	91	58.031	Poecilia_mexicana
ENSPFOG00000013109	-	96	60.606	ENSPMEG00000006334	-	89	55.263	Poecilia_mexicana
ENSPFOG00000013109	-	89	90.942	ENSPMEG00000020297	-	99	90.942	Poecilia_mexicana
ENSPFOG00000013109	-	91	60.360	ENSPMEG00000000724	-	79	53.333	Poecilia_mexicana
ENSPFOG00000013109	-	79	81.548	ENSPMEG00000020252	-	92	81.548	Poecilia_mexicana
ENSPFOG00000013109	-	99	80.639	ENSPMEG00000005912	-	85	80.639	Poecilia_mexicana
ENSPFOG00000013109	-	80	36.842	ENSPMEG00000018950	-	67	36.842	Poecilia_mexicana
ENSPFOG00000013109	-	98	38.528	ENSPREG00000020440	-	82	36.576	Poecilia_reticulata
ENSPFOG00000013109	-	99	79.926	ENSPREG00000001530	-	91	79.926	Poecilia_reticulata
ENSPFOG00000013109	-	94	82.673	ENSPREG00000001250	-	96	83.264	Poecilia_reticulata
ENSPFOG00000013109	-	96	36.364	ENSPNYG00000010004	-	94	36.364	Pundamilia_nyererei
ENSPFOG00000013109	-	93	38.799	ENSPNAG00000013132	-	73	38.799	Pygocentrus_nattereri
ENSPFOG00000013109	-	99	38.636	ENSPNAG00000014932	-	68	38.965	Pygocentrus_nattereri
ENSPFOG00000013109	-	91	45.545	ENSPNAG00000002097	-	91	45.545	Pygocentrus_nattereri
ENSPFOG00000013109	-	83	38.776	ENSPNAG00000025850	-	83	36.752	Pygocentrus_nattereri
ENSPFOG00000013109	-	91	40.404	ENSPNAG00000019899	-	94	39.819	Pygocentrus_nattereri
ENSPFOG00000013109	-	87	40.957	ENSSFOG00015002507	-	94	40.957	Scleropages_formosus
ENSPFOG00000013109	-	91	36.735	ENSSFOG00015002503	-	90	36.735	Scleropages_formosus
ENSPFOG00000013109	-	86	41.489	ENSSFOG00015002420	-	82	41.489	Scleropages_formosus
ENSPFOG00000013109	-	96	35.506	ENSSMAG00000012187	-	70	36.830	Scophthalmus_maximus
ENSPFOG00000013109	-	96	42.009	ENSSDUG00000022299	-	91	42.009	Seriola_dumerili
ENSPFOG00000013109	-	95	38.308	ENSSLDG00000010531	-	97	38.128	Seriola_lalandi_dorsalis
ENSPFOG00000013109	-	95	36.280	ENSSLDG00000009168	-	96	40.000	Seriola_lalandi_dorsalis
ENSPFOG00000013109	-	96	35.874	ENSSLDG00000005786	-	68	35.874	Seriola_lalandi_dorsalis
ENSPFOG00000013109	-	84	43.316	ENSSPAG00000015927	-	79	43.655	Stegastes_partitus
ENSPFOG00000013109	-	99	35.833	ENSSPAG00000017616	-	93	35.833	Stegastes_partitus
ENSPFOG00000013109	-	89	43.316	ENSTRUG00000018070	-	80	42.784	Takifugu_rubripes
ENSPFOG00000013109	-	96	40.394	ENSTRUG00000020422	-	83	36.546	Takifugu_rubripes
ENSPFOG00000013109	-	88	44.974	ENSTNIG00000004275	-	94	44.974	Tetraodon_nigroviridis
ENSPFOG00000013109	-	85	49.223	ENSTNIG00000004220	-	84	49.223	Tetraodon_nigroviridis
ENSPFOG00000013109	-	89	85.789	ENSXCOG00000018421	-	100	85.217	Xiphophorus_couchianus
ENSPFOG00000013109	-	85	45.503	ENSXCOG00000009005	-	90	45.263	Xiphophorus_couchianus
ENSPFOG00000013109	-	99	79.967	ENSXMAG00000023360	-	92	79.967	Xiphophorus_maculatus