EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPFOG00000013173 (Gene tree)
Gene ID: 103149781
Gene Symbol: si:dkey-37o8.1
Alias: -
Full Name: elongation factor 1-alpha-like
Gene Type: protein_coding
Species: Poecilia_formosa
Status: putative
Strand: Minus strand
Length: 3648 bases
Position: chrKI519846.1:376960-380607
Accession: 103149781
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPFOP00000013229	GTP_EFTU	PF00009.27	1.4e-52	1	1
ENSPFOP00000013229	MMR_HSR1	PF01926.23	7.8e-08	1	1
ENSPFOP00000013229	GTP_EFTU_D2	PF03144.25	3.3e-13	1	1
ENSPFOP00000013229	GTP_EFTU_D3	PF03143.17	4.5e-38	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPFOT00000013247	-	2063	-	ENSPFOP00000013229	456 (aa)	XP_007569159	A0A087Y5C6

Gene Model

Click here to download ENSPFOG00000013173's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000013173's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPFOG00000013173	si:dkey-37o8.1	100	68.182	ENSPFOG00000013175	eef1a1b	100	68.182
ENSPFOG00000013173	si:dkey-37o8.1	96	38.427	ENSPFOG00000021764	hbs1l	61	38.427
ENSPFOG00000013173	si:dkey-37o8.1	96	38.128	ENSPFOG00000016035	gspt1l	73	38.128
ENSPFOG00000013173	si:dkey-37o8.1	95	38.337	ENSPFOG00000005224	-	70	38.356
ENSPFOG00000013173	si:dkey-37o8.1	98	68.233	ENSPFOG00000003924	-	100	66.828
ENSPFOG00000013173	si:dkey-37o8.1	96	30.444	ENSPFOG00000007043	tufm	87	30.444
ENSPFOG00000013173	si:dkey-37o8.1	100	68.182	ENSPFOG00000004725	eef1a1b	100	68.182
ENSPFOG00000013173	si:dkey-37o8.1	99	69.079	ENSPFOG00000003782	-	99	69.079

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPFOG00000013173	si:dkey-37o8.1	98	90.848	ENSAPOG00000016459	si:dkey-37o8.1	98	90.848	Acanthochromis_polyacanthus
ENSPFOG00000013173	si:dkey-37o8.1	98	86.534	ENSACIG00000020985	si:dkey-37o8.1	85	86.534	Amphilophus_citrinellus
ENSPFOG00000013173	si:dkey-37o8.1	100	90.372	ENSAOCG00000002663	si:dkey-37o8.1	100	90.372	Amphiprion_ocellaris
ENSPFOG00000013173	si:dkey-37o8.1	100	90.372	ENSAPEG00000012670	si:dkey-37o8.1	100	90.372	Amphiprion_percula
ENSPFOG00000013173	si:dkey-37o8.1	92	91.469	ENSATEG00000002217	si:dkey-37o8.1	99	91.469	Anabas_testudineus
ENSPFOG00000013173	si:dkey-37o8.1	98	89.732	ENSACLG00000003519	si:dkey-37o8.1	98	89.732	Astatotilapia_calliptera
ENSPFOG00000013173	si:dkey-37o8.1	100	84.279	ENSAMXG00000002728	si:dkey-37o8.1	100	84.279	Astyanax_mexicanus
ENSPFOG00000013173	si:dkey-37o8.1	98	72.000	ENSCPBG00000020570	-	89	72.000	Chrysemys_picta_bellii
ENSPFOG00000013173	si:dkey-37o8.1	98	84.956	ENSCSEG00000019807	si:dkey-37o8.1	98	84.245	Cynoglossus_semilaevis
ENSPFOG00000013173	si:dkey-37o8.1	99	93.187	ENSCVAG00000009828	si:dkey-37o8.1	99	93.187	Cyprinodon_variegatus
ENSPFOG00000013173	si:dkey-37o8.1	100	81.441	ENSDARG00000071727	si:dkey-37o8.1	95	81.441	Danio_rerio
ENSPFOG00000013173	si:dkey-37o8.1	100	84.061	ENSELUG00000007495	si:dkey-37o8.1	100	84.061	Esox_lucius
ENSPFOG00000013173	si:dkey-37o8.1	100	93.435	ENSFHEG00000017452	si:dkey-37o8.1	100	93.435	Fundulus_heteroclitus
ENSPFOG00000013173	si:dkey-37o8.1	99	79.736	ENSGMOG00000006122	si:dkey-37o8.1	100	79.736	Gadus_morhua
ENSPFOG00000013173	si:dkey-37o8.1	98	89.732	ENSGAFG00000000367	si:dkey-37o8.1	99	89.732	Gambusia_affinis
ENSPFOG00000013173	si:dkey-37o8.1	100	86.652	ENSGACG00000004505	si:dkey-37o8.1	100	86.652	Gasterosteus_aculeatus
ENSPFOG00000013173	si:dkey-37o8.1	96	74.091	ENSGAGG00000007724	-	93	76.923	Gopherus_agassizii
ENSPFOG00000013173	si:dkey-37o8.1	98	89.509	ENSHBUG00000015515	si:dkey-37o8.1	98	89.509	Haplochromis_burtoni
ENSPFOG00000013173	si:dkey-37o8.1	99	79.823	ENSHCOG00000001215	si:dkey-37o8.1	100	79.823	Hippocampus_comes
ENSPFOG00000013173	si:dkey-37o8.1	100	82.751	ENSIPUG00000004067	si:dkey-37o8.1	100	82.751	Ictalurus_punctatus
ENSPFOG00000013173	si:dkey-37o8.1	100	91.685	ENSKMAG00000015910	si:dkey-37o8.1	100	91.685	Kryptolebias_marmoratus
ENSPFOG00000013173	si:dkey-37o8.1	99	89.800	ENSLBEG00000021334	si:dkey-37o8.1	90	89.800	Labrus_bergylta
ENSPFOG00000013173	si:dkey-37o8.1	99	75.551	ENSLACG00000003948	si:dkey-37o8.1	99	75.551	Latimeria_chalumnae
ENSPFOG00000013173	si:dkey-37o8.1	100	79.956	ENSLOCG00000011245	si:dkey-37o8.1	100	79.956	Lepisosteus_oculatus
ENSPFOG00000013173	si:dkey-37o8.1	99	74.449	ENSMAMG00000009907	si:dkey-37o8.1	95	74.449	Mastacembelus_armatus
ENSPFOG00000013173	si:dkey-37o8.1	98	89.732	ENSMZEG00005018358	si:dkey-37o8.1	98	89.732	Maylandia_zebra
ENSPFOG00000013173	si:dkey-37o8.1	98	88.839	ENSMMOG00000004111	si:dkey-37o8.1	98	88.839	Mola_mola
ENSPFOG00000013173	si:dkey-37o8.1	96	80.365	ENSMALG00000017152	si:dkey-37o8.1	99	80.365	Monopterus_albus
ENSPFOG00000013173	si:dkey-37o8.1	98	89.509	ENSNBRG00000013552	si:dkey-37o8.1	98	89.509	Neolamprologus_brichardi
ENSPFOG00000013173	si:dkey-37o8.1	98	89.509	ENSONIG00000006165	si:dkey-37o8.1	98	89.509	Oreochromis_niloticus
ENSPFOG00000013173	si:dkey-37o8.1	100	90.810	ENSORLG00000019066	si:dkey-37o8.1	100	90.810	Oryzias_latipes
ENSPFOG00000013173	si:dkey-37o8.1	100	90.810	ENSORLG00020008094	si:dkey-37o8.1	100	90.810	Oryzias_latipes_hni
ENSPFOG00000013173	si:dkey-37o8.1	100	90.591	ENSORLG00015008410	si:dkey-37o8.1	100	90.591	Oryzias_latipes_hsok
ENSPFOG00000013173	si:dkey-37o8.1	100	91.028	ENSOMEG00000001868	si:dkey-37o8.1	100	91.028	Oryzias_melastigma
ENSPFOG00000013173	si:dkey-37o8.1	100	82.571	ENSPKIG00000017246	si:dkey-37o8.1	100	82.571	Paramormyrops_kingsleyae
ENSPFOG00000013173	si:dkey-37o8.1	59	67.518	ENSPSIG00000008080	-	96	67.518	Pelodiscus_sinensis
ENSPFOG00000013173	si:dkey-37o8.1	100	98.246	ENSPLAG00000010405	si:dkey-37o8.1	100	98.246	Poecilia_latipinna
ENSPFOG00000013173	si:dkey-37o8.1	100	99.562	ENSPMEG00000015233	si:dkey-37o8.1	100	99.562	Poecilia_mexicana
ENSPFOG00000013173	si:dkey-37o8.1	99	97.797	ENSPREG00000006280	si:dkey-37o8.1	100	97.797	Poecilia_reticulata
ENSPFOG00000013173	si:dkey-37o8.1	98	89.062	ENSPNYG00000002059	si:dkey-37o8.1	98	89.062	Pundamilia_nyererei
ENSPFOG00000013173	si:dkey-37o8.1	100	83.843	ENSPNAG00000009990	si:dkey-37o8.1	100	83.843	Pygocentrus_nattereri
ENSPFOG00000013173	si:dkey-37o8.1	99	81.898	ENSSFOG00015019070	si:dkey-37o8.1	99	81.898	Scleropages_formosus
ENSPFOG00000013173	si:dkey-37o8.1	99	90.244	ENSSMAG00000016143	si:dkey-37o8.1	99	90.244	Scophthalmus_maximus
ENSPFOG00000013173	si:dkey-37o8.1	100	90.372	ENSSDUG00000009163	si:dkey-37o8.1	100	90.372	Seriola_dumerili
ENSPFOG00000013173	si:dkey-37o8.1	100	90.153	ENSSLDG00000023761	si:dkey-37o8.1	100	90.153	Seriola_lalandi_dorsalis
ENSPFOG00000013173	si:dkey-37o8.1	99	70.640	ENSSPUG00000007467	-	98	70.889	Sphenodon_punctatus
ENSPFOG00000013173	si:dkey-37o8.1	99	91.150	ENSSPAG00000013856	si:dkey-37o8.1	99	91.150	Stegastes_partitus
ENSPFOG00000013173	si:dkey-37o8.1	97	89.663	ENSTRUG00000009006	si:dkey-37o8.1	99	89.663	Takifugu_rubripes
ENSPFOG00000013173	si:dkey-37o8.1	98	89.286	ENSTNIG00000017138	si:dkey-37o8.1	97	89.286	Tetraodon_nigroviridis
ENSPFOG00000013173	si:dkey-37o8.1	96	75.399	ENSXETG00000017744	42Sp50	97	74.058	Xenopus_tropicalis
ENSPFOG00000013173	si:dkey-37o8.1	99	96.916	ENSXCOG00000012296	si:dkey-37o8.1	100	96.916	Xiphophorus_couchianus
ENSPFOG00000013173	si:dkey-37o8.1	100	96.937	ENSXMAG00000001998	si:dkey-37o8.1	100	96.937	Xiphophorus_maculatus