EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPFOG00000013404 (Gene tree)
Gene ID: 103130342
Gene Symbol: ythdc1
Alias: -
Full Name: YTH domain containing 1
Gene Type: protein_coding
Species: Poecilia_formosa
Status: putative
Strand: Minus strand
Length: 12939 bases
Position: chrKI520236.1:65501-78439
Accession: 103130342
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPFOP00000013481	YTH	PF04146.15	7e-41	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPFOT00000013500	-	3071	-	ENSPFOP00000013481	663 (aa)	XP_007541777	A0A087Y628

Gene Model

Click here to download ENSPFOG00000013404's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000013404's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPFOG00000013404	ythdc1	60	65.625	ENSG00000083896	YTHDC1	57	59.545	Homo_sapiens
ENSPFOG00000013404	ythdc1	82	79.787	ENSAPOG00000013997	ythdc1	93	73.940	Acanthochromis_polyacanthus
ENSPFOG00000013404	ythdc1	94	65.971	ENSACIG00000019728	ythdc1	62	76.413	Amphilophus_citrinellus
ENSPFOG00000013404	ythdc1	94	82.629	ENSAOCG00000000239	ythdc1	94	81.534	Amphiprion_ocellaris
ENSPFOG00000013404	ythdc1	83	82.832	ENSAPEG00000000618	ythdc1	89	82.238	Amphiprion_percula
ENSPFOG00000013404	ythdc1	88	78.130	ENSATEG00000023007	ythdc1	91	80.824	Anabas_testudineus
ENSPFOG00000013404	ythdc1	92	54.396	ENSAPLG00000009921	YTHDC1	50	65.591	Anas_platyrhynchos
ENSPFOG00000013404	ythdc1	94	53.924	ENSACAG00000009697	YTHDC1	58	57.596	Anolis_carolinensis
ENSPFOG00000013404	ythdc1	94	81.690	ENSACLG00000019371	ythdc1	94	79.499	Astatotilapia_calliptera
ENSPFOG00000013404	ythdc1	94	62.558	ENSAMXG00000006978	ythdc1	57	68.171	Astyanax_mexicanus
ENSPFOG00000013404	ythdc1	60	64.073	ENSBTAG00000015572	YTHDC1	54	55.314	Bos_taurus
ENSPFOG00000013404	ythdc1	60	64.989	ENSCAFG00020027112	YTHDC1	57	57.047	Canis_lupus_dingo
ENSPFOG00000013404	ythdc1	60	58.313	ENSCHIG00000004810	YTHDC1	50	65.693	Capra_hircus
ENSPFOG00000013404	ythdc1	60	65.625	ENSTSYG00000011668	YTHDC1	57	59.545	Carlito_syrichta
ENSPFOG00000013404	ythdc1	60	58.072	ENSCPOG00000010929	YTHDC1	54	53.226	Cavia_porcellus
ENSPFOG00000013404	ythdc1	60	65.625	ENSCCAG00000035754	YTHDC1	57	59.545	Cebus_capucinus
ENSPFOG00000013404	ythdc1	60	65.625	ENSCATG00000036320	YTHDC1	51	65.693	Cercocebus_atys
ENSPFOG00000013404	ythdc1	62	64.471	ENSCLAG00000005482	YTHDC1	58	58.259	Chinchilla_lanigera
ENSPFOG00000013404	ythdc1	93	57.781	ENSCPBG00000021965	YTHDC1	62	59.637	Chrysemys_picta_bellii
ENSPFOG00000013404	ythdc1	60	65.625	ENSCANG00000004769	YTHDC1	50	65.693	Colobus_angolensis_palliatus
ENSPFOG00000013404	ythdc1	60	65.385	ENSCGRG00001000816	Ythdc1	56	60.000	Cricetulus_griseus_chok1gshd
ENSPFOG00000013404	ythdc1	60	65.385	ENSCGRG00000009807	Ythdc1	57	59.318	Cricetulus_griseus_crigri
ENSPFOG00000013404	ythdc1	94	80.691	ENSCSEG00000020404	ythdc1	94	77.551	Cynoglossus_semilaevis
ENSPFOG00000013404	ythdc1	61	93.300	ENSCVAG00000022349	ythdc1	59	93.052	Cyprinodon_variegatus
ENSPFOG00000013404	ythdc1	94	62.112	ENSDARG00000051953	ythdc1	58	66.271	Danio_rerio
ENSPFOG00000013404	ythdc1	94	53.934	ENSDNOG00000004949	YTHDC1	57	59.545	Dasypus_novemcinctus
ENSPFOG00000013404	ythdc1	60	65.625	ENSDORG00000013045	Ythdc1	58	59.545	Dipodomys_ordii
ENSPFOG00000013404	ythdc1	64	67.532	ENSETEG00000001878	YTHDC1	52	80.000	Echinops_telfairi
ENSPFOG00000013404	ythdc1	60	64.989	ENSEASG00005018383	YTHDC1	61	60.000	Equus_asinus_asinus
ENSPFOG00000013404	ythdc1	76	65.721	ENSECAG00000018303	YTHDC1	61	60.000	Equus_caballus
ENSPFOG00000013404	ythdc1	60	64.531	ENSEEUG00000015466	YTHDC1	57	58.957	Erinaceus_europaeus
ENSPFOG00000013404	ythdc1	94	60.389	ENSELUG00000014029	ythdc1	89	61.345	Esox_lucius
ENSPFOG00000013404	ythdc1	60	65.385	ENSFCAG00000026791	YTHDC1	56	60.714	Felis_catus
ENSPFOG00000013404	ythdc1	75	63.333	ENSFALG00000006581	YTHDC1	81	65.591	Ficedula_albicollis
ENSPFOG00000013404	ythdc1	60	65.144	ENSFDAG00000018560	YTHDC1	58	59.318	Fukomys_damarensis
ENSPFOG00000013404	ythdc1	66	81.166	ENSGMOG00000018815	ythdc1	58	75.410	Gadus_morhua
ENSPFOG00000013404	ythdc1	92	55.215	ENSGALG00000035906	YTHDC1	55	59.864	Gallus_gallus
ENSPFOG00000013404	ythdc1	69	83.333	ENSGAFG00000001759	ythdc1	55	99.197	Gambusia_affinis
ENSPFOG00000013404	ythdc1	94	67.004	ENSGACG00000015486	ythdc1	57	71.396	Gasterosteus_aculeatus
ENSPFOG00000013404	ythdc1	93	57.734	ENSGAGG00000007108	YTHDC1	57	65.049	Gopherus_agassizii
ENSPFOG00000013404	ythdc1	60	65.625	ENSGGOG00000021958	YTHDC1	50	65.693	Gorilla_gorilla
ENSPFOG00000013404	ythdc1	94	81.847	ENSHBUG00000019288	ythdc1	94	79.656	Haplochromis_burtoni
ENSPFOG00000013404	ythdc1	60	65.144	ENSHGLG00000006319	-	58	58.259	Heterocephalus_glaber_female
ENSPFOG00000013404	ythdc1	60	63.810	ENSHGLG00100001556	-	58	57.143	Heterocephalus_glaber_male
ENSPFOG00000013404	ythdc1	71	79.487	ENSHCOG00000001520	ythdc1	89	77.586	Hippocampus_comes
ENSPFOG00000013404	ythdc1	94	60.125	ENSIPUG00000018136	ythdc1	58	66.508	Ictalurus_punctatus
ENSPFOG00000013404	ythdc1	60	64.387	ENSSTOG00000013652	YTHDC1	57	58.482	Ictidomys_tridecemlineatus
ENSPFOG00000013404	ythdc1	60	64.663	ENSJJAG00000010268	Ythdc1	57	59.397	Jaculus_jaculus
ENSPFOG00000013404	ythdc1	61	86.520	ENSKMAG00000006483	ythdc1	85	88.725	Kryptolebias_marmoratus
ENSPFOG00000013404	ythdc1	61	73.759	ENSLBEG00000020831	ythdc1	81	66.925	Labrus_bergylta
ENSPFOG00000013404	ythdc1	59	64.750	ENSLACG00000004893	YTHDC1	60	59.497	Latimeria_chalumnae
ENSPFOG00000013404	ythdc1	94	56.916	ENSLOCG00000003045	ythdc1	52	67.385	Lepisosteus_oculatus
ENSPFOG00000013404	ythdc1	80	52.830	ENSLAFG00000021592	YTHDC1	65	64.543	Loxodonta_africana
ENSPFOG00000013404	ythdc1	60	65.625	ENSMFAG00000031927	YTHDC1	50	65.693	Macaca_fascicularis
ENSPFOG00000013404	ythdc1	60	65.625	ENSMNEG00000033751	YTHDC1	50	65.693	Macaca_nemestrina
ENSPFOG00000013404	ythdc1	60	65.625	ENSMLEG00000042147	YTHDC1	50	65.693	Mandrillus_leucophaeus
ENSPFOG00000013404	ythdc1	60	87.624	ENSMAMG00000013122	ythdc1	92	79.037	Mastacembelus_armatus
ENSPFOG00000013404	ythdc1	94	81.690	ENSMZEG00005023173	ythdc1	94	79.499	Maylandia_zebra
ENSPFOG00000013404	ythdc1	60	65.385	ENSMAUG00000001286	Ythdc1	56	60.000	Mesocricetus_auratus
ENSPFOG00000013404	ythdc1	94	53.814	ENSMICG00000034640	YTHDC1	56	60.000	Microcebus_murinus
ENSPFOG00000013404	ythdc1	60	65.385	ENSMOCG00000020201	Ythdc1	58	58.259	Microtus_ochrogaster
ENSPFOG00000013404	ythdc1	74	74.383	ENSMMOG00000021200	ythdc1	93	67.328	Mola_mola
ENSPFOG00000013404	ythdc1	51	49.133	ENSMODG00000004117	-	93	48.521	Monodelphis_domestica
ENSPFOG00000013404	ythdc1	95	37.659	ENSMODG00000010076	-	50	49.731	Monodelphis_domestica
ENSPFOG00000013404	ythdc1	66	44.864	ENSMODG00000009173	-	74	49.462	Monodelphis_domestica
ENSPFOG00000013404	ythdc1	94	56.657	ENSMODG00000020754	-	59	60.000	Monodelphis_domestica
ENSPFOG00000013404	ythdc1	99	42.066	ENSMODG00000014337	-	60	58.362	Monodelphis_domestica
ENSPFOG00000013404	ythdc1	83	80.776	ENSMALG00000013412	ythdc1	93	80.392	Monopterus_albus
ENSPFOG00000013404	ythdc1	72	68.782	ENSMPUG00000001743	YTHDC1	57	71.429	Mustela_putorius_furo
ENSPFOG00000013404	ythdc1	86	69.640	ENSNBRG00000007663	ythdc1	87	73.684	Neolamprologus_brichardi
ENSPFOG00000013404	ythdc1	60	63.371	ENSNLEG00000009202	YTHDC1	57	57.812	Nomascus_leucogenys
ENSPFOG00000013404	ythdc1	61	68.125	ENSOPRG00000008986	YTHDC1	54	62.422	Ochotona_princeps
ENSPFOG00000013404	ythdc1	60	64.183	ENSODEG00000001715	YTHDC1	57	59.318	Octodon_degus
ENSPFOG00000013404	ythdc1	94	93.182	ENSONIG00000012651	ythdc1	94	79.969	Oreochromis_niloticus
ENSPFOG00000013404	ythdc1	85	68.262	ENSOCUG00000015886	YTHDC1	71	65.591	Oryctolagus_cuniculus
ENSPFOG00000013404	ythdc1	94	78.922	ENSORLG00000030544	ythdc1	61	86.946	Oryzias_latipes
ENSPFOG00000013404	ythdc1	94	79.747	ENSORLG00020019316	ythdc1	95	76.741	Oryzias_latipes_hni
ENSPFOG00000013404	ythdc1	94	75.824	ENSOMEG00000000551	ythdc1	95	74.725	Oryzias_melastigma
ENSPFOG00000013404	ythdc1	60	65.675	ENSOGAG00000003362	YTHDC1	57	60.000	Otolemur_garnettii
ENSPFOG00000013404	ythdc1	60	65.625	ENSPPAG00000041315	YTHDC1	51	65.693	Pan_paniscus
ENSPFOG00000013404	ythdc1	60	65.385	ENSPPRG00000011979	YTHDC1	56	60.714	Panthera_pardus
ENSPFOG00000013404	ythdc1	60	64.904	ENSPTIG00000015527	YTHDC1	56	60.238	Panthera_tigris_altaica
ENSPFOG00000013404	ythdc1	60	65.625	ENSPTRG00000016105	YTHDC1	51	65.693	Pan_troglodytes
ENSPFOG00000013404	ythdc1	60	65.625	ENSPANG00000021590	YTHDC1	50	65.693	Papio_anubis
ENSPFOG00000013404	ythdc1	94	59.412	ENSPKIG00000018497	ythdc1	75	61.009	Paramormyrops_kingsleyae
ENSPFOG00000013404	ythdc1	92	55.917	ENSPSIG00000002782	YTHDC1	60	59.864	Pelodiscus_sinensis
ENSPFOG00000013404	ythdc1	59	70.393	ENSPMGG00000000970	-	77	71.517	Periophthalmus_magnuspinnatus
ENSPFOG00000013404	ythdc1	60	65.385	ENSPEMG00000013850	Ythdc1	58	59.318	Peromyscus_maniculatus_bairdii
ENSPFOG00000013404	ythdc1	94	56.805	ENSPCIG00000006870	YTHDC1	59	60.000	Phascolarctos_cinereus
ENSPFOG00000013404	ythdc1	71	100.000	ENSPLAG00000011079	ythdc1	99	100.000	Poecilia_latipinna
ENSPFOG00000013404	ythdc1	100	99.698	ENSPMEG00000009238	ythdc1	100	99.698	Poecilia_mexicana
ENSPFOG00000013404	ythdc1	100	87.519	ENSPREG00000016973	ythdc1	100	87.519	Poecilia_reticulata
ENSPFOG00000013404	ythdc1	60	64.760	ENSPPYG00000014726	YTHDC1	65	59.545	Pongo_abelii
ENSPFOG00000013404	ythdc1	94	51.343	ENSPCOG00000019105	YTHDC1	54	56.311	Propithecus_coquereli
ENSPFOG00000013404	ythdc1	94	81.690	ENSPNYG00000011687	ythdc1	94	79.499	Pundamilia_nyererei
ENSPFOG00000013404	ythdc1	94	62.423	ENSPNAG00000028365	ythdc1	57	67.696	Pygocentrus_nattereri
ENSPFOG00000013404	ythdc1	60	65.625	ENSRROG00000035028	YTHDC1	50	65.693	Rhinopithecus_roxellana
ENSPFOG00000013404	ythdc1	60	65.625	ENSSBOG00000022353	YTHDC1	50	65.693	Saimiri_boliviensis_boliviensis
ENSPFOG00000013404	ythdc1	94	55.621	ENSSHAG00000002538	YTHDC1	65	60.227	Sarcophilus_harrisii
ENSPFOG00000013404	ythdc1	94	61.085	ENSSFOG00015003298	ythdc1	58	67.299	Scleropages_formosus
ENSPFOG00000013404	ythdc1	94	81.703	ENSSMAG00000009086	ythdc1	94	81.388	Scophthalmus_maximus
ENSPFOG00000013404	ythdc1	94	81.832	ENSSDUG00000022008	ythdc1	59	89.163	Seriola_dumerili
ENSPFOG00000013404	ythdc1	94	80.371	ENSSLDG00000007926	ythdc1	59	89.163	Seriola_lalandi_dorsalis
ENSPFOG00000013404	ythdc1	60	63.844	ENSSARG00000010960	YTHDC1	74	58.499	Sorex_araneus
ENSPFOG00000013404	ythdc1	94	54.586	ENSSPUG00000009357	YTHDC1	61	59.292	Sphenodon_punctatus
ENSPFOG00000013404	ythdc1	94	83.540	ENSSPAG00000011449	ythdc1	94	82.298	Stegastes_partitus
ENSPFOG00000013404	ythdc1	60	64.989	ENSSSCG00000035505	YTHDC1	61	58.929	Sus_scrofa
ENSPFOG00000013404	ythdc1	94	55.279	ENSTGUG00000004452	-	59	60.091	Taeniopygia_guttata
ENSPFOG00000013404	ythdc1	95	65.204	ENSTRUG00000010142	ythdc1	63	77.641	Takifugu_rubripes
ENSPFOG00000013404	ythdc1	96	73.292	ENSTNIG00000013243	ythdc1	62	83.990	Tetraodon_nigroviridis
ENSPFOG00000013404	ythdc1	60	65.385	ENSUAMG00000010388	YTHDC1	61	60.000	Ursus_americanus
ENSPFOG00000013404	ythdc1	92	49.924	ENSUMAG00000013668	YTHDC1	61	51.570	Ursus_maritimus
ENSPFOG00000013404	ythdc1	94	54.265	ENSVPAG00000009040	YTHDC1	56	60.000	Vicugna_pacos
ENSPFOG00000013404	ythdc1	60	64.989	ENSVVUG00000005387	YTHDC1	61	60.000	Vulpes_vulpes
ENSPFOG00000013404	ythdc1	94	57.099	ENSXETG00000017960	ythdc1	57	64.692	Xenopus_tropicalis
ENSPFOG00000013404	ythdc1	52	92.632	ENSXCOG00000000530	ythdc1	89	82.301	Xiphophorus_couchianus
ENSPFOG00000013404	ythdc1	100	97.289	ENSXMAG00000005196	ythdc1	100	97.289	Xiphophorus_maculatus