EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPFOG00000013524 (Gene tree)
Gene ID: 103130353
Gene Symbol: prpf4
Alias: -
Full Name: PRP4 pre-mRNA processing factor 4 homolog (yeast)
Gene Type: protein_coding
Species: Poecilia_formosa
Status: putative
Strand: Minus strand
Length: 11756 bases
Position: chrKI520236.1:111448-123203
Accession: ZDB-GENE-030131-5143
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPFOP00000013530	PRP4	PF08799.11	1.3e-14	1	1
ENSPFOP00000023233	PRP4	PF08799.11	2.2e-14	1	1
ENSPFOP00000027534	PRP4	PF08799.11	2.3e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPFOT00000031087	-	1552	-	ENSPFOP00000027534	516 (aa)	-	A0A096M7Z3
ENSPFOT00000022550	-	1519	-	ENSPFOP00000023233	503 (aa)	-	A0A096LVP2
ENSPFOT00000013549	-	1235	-	ENSPFOP00000013530	330 (aa)	-	A0A087Y677

Gene Model

Click here to download ENSPFOG00000013524's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000013524's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPFOG00000013524	prpf4	56	31.905	ENSPFOG00000011436	wdr5	88	31.905
ENSPFOG00000013524	prpf4	56	31.905	ENSPFOG00000011257	wdr5	88	31.905

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPFOG00000013524	prpf4	98	73.292	ENSG00000136875	PRPF4	96	70.217	Homo_sapiens
ENSPFOG00000013524	prpf4	99	88.450	ENSAPOG00000014132	prpf4	99	83.573	Acanthochromis_polyacanthus
ENSPFOG00000013524	prpf4	98	72.981	ENSAMEG00000013048	PRPF4	94	70.020	Ailuropoda_melanoleuca
ENSPFOG00000013524	prpf4	99	88.146	ENSACIG00000005579	prpf4	100	84.630	Amphilophus_citrinellus
ENSPFOG00000013524	prpf4	99	89.362	ENSAOCG00000005457	prpf4	100	84.630	Amphiprion_ocellaris
ENSPFOG00000013524	prpf4	99	89.058	ENSAPEG00000000776	prpf4	100	84.436	Amphiprion_percula
ENSPFOG00000013524	prpf4	99	88.754	ENSATEG00000023013	prpf4	100	84.241	Anabas_testudineus
ENSPFOG00000013524	prpf4	99	72.699	ENSAPLG00000006534	PRPF4	94	70.059	Anas_platyrhynchos
ENSPFOG00000013524	prpf4	99	70.000	ENSACAG00000015110	PRPF4	98	68.726	Anolis_carolinensis
ENSPFOG00000013524	prpf4	98	72.981	ENSANAG00000022464	PRPF4	92	70.020	Aotus_nancymaae
ENSPFOG00000013524	prpf4	99	89.970	ENSACLG00000019031	prpf4	100	85.798	Astatotilapia_calliptera
ENSPFOG00000013524	prpf4	100	76.061	ENSAMXG00000006756	prpf4	100	72.179	Astyanax_mexicanus
ENSPFOG00000013524	prpf4	98	72.981	ENSBTAG00000004571	PRPF4	96	70.020	Bos_taurus
ENSPFOG00000013524	prpf4	88	41.667	WBGene00007972	prp-4	91	41.667	Caenorhabditis_elegans
ENSPFOG00000013524	prpf4	98	72.981	ENSCJAG00000017856	PRPF4	96	70.020	Callithrix_jacchus
ENSPFOG00000013524	prpf4	98	72.981	ENSCAFG00000003224	PRPF4	93	70.020	Canis_familiaris
ENSPFOG00000013524	prpf4	98	72.981	ENSCAFG00020022637	PRPF4	97	70.020	Canis_lupus_dingo
ENSPFOG00000013524	prpf4	98	72.981	ENSCHIG00000024648	-	96	70.020	Capra_hircus
ENSPFOG00000013524	prpf4	98	72.981	ENSTSYG00000010366	PRPF4	96	70.217	Carlito_syrichta
ENSPFOG00000013524	prpf4	90	60.993	ENSCAPG00000008935	PRPF4	97	60.993	Cavia_aperea
ENSPFOG00000013524	prpf4	98	72.981	ENSCPOG00000010747	-	96	69.625	Cavia_porcellus
ENSPFOG00000013524	prpf4	98	69.255	ENSCPOG00000014729	-	96	64.694	Cavia_porcellus
ENSPFOG00000013524	prpf4	98	72.671	ENSCCAG00000028990	PRPF4	96	69.822	Cebus_capucinus
ENSPFOG00000013524	prpf4	98	72.981	ENSCATG00000021552	PRPF4	96	70.020	Cercocebus_atys
ENSPFOG00000013524	prpf4	98	72.981	ENSCLAG00000013448	PRPF4	96	70.020	Chinchilla_lanigera
ENSPFOG00000013524	prpf4	88	69.298	ENSCHOG00000007233	PRPF4	100	69.298	Choloepus_hoffmanni
ENSPFOG00000013524	prpf4	99	71.472	ENSCPBG00000019136	PRPF4	73	69.276	Chrysemys_picta_bellii
ENSPFOG00000013524	prpf4	96	55.600	ENSCING00000001299	-	95	55.600	Ciona_intestinalis
ENSPFOG00000013524	prpf4	99	54.386	ENSCSAVG00000009178	-	99	55.365	Ciona_savignyi
ENSPFOG00000013524	prpf4	98	72.981	ENSCANG00000003246	PRPF4	96	70.020	Colobus_angolensis_palliatus
ENSPFOG00000013524	prpf4	98	72.981	ENSCGRG00001016992	Prpf4	96	70.020	Cricetulus_griseus_chok1gshd
ENSPFOG00000013524	prpf4	98	72.981	ENSCGRG00000017560	Prpf4	96	70.020	Cricetulus_griseus_crigri
ENSPFOG00000013524	prpf4	99	81.155	ENSCSEG00000020451	prpf4	100	78.988	Cynoglossus_semilaevis
ENSPFOG00000013524	prpf4	99	76.596	ENSDARG00000067639	prpf4	100	73.152	Danio_rerio
ENSPFOG00000013524	prpf4	98	72.981	ENSDNOG00000013203	PRPF4	96	69.822	Dasypus_novemcinctus
ENSPFOG00000013524	prpf4	98	73.292	ENSDORG00000026275	Prpf4	96	70.414	Dipodomys_ordii
ENSPFOG00000013524	prpf4	99	46.499	FBgn0036733	U4-U6-60K	99	46.931	Drosophila_melanogaster
ENSPFOG00000013524	prpf4	98	72.981	ENSETEG00000020389	PRPF4	96	70.020	Echinops_telfairi
ENSPFOG00000013524	prpf4	99	64.634	ENSEBUG00000015229	prpf4	88	62.138	Eptatretus_burgeri
ENSPFOG00000013524	prpf4	98	72.981	ENSEASG00005022678	PRPF4	96	70.020	Equus_asinus_asinus
ENSPFOG00000013524	prpf4	98	72.981	ENSECAG00000007072	PRPF4	96	70.020	Equus_caballus
ENSPFOG00000013524	prpf4	75	79.508	ENSEEUG00000007480	PRPF4	95	53.499	Erinaceus_europaeus
ENSPFOG00000013524	prpf4	99	75.076	ENSELUG00000007510	prpf4	100	72.763	Esox_lucius
ENSPFOG00000013524	prpf4	98	72.981	ENSFCAG00000005514	PRPF4	96	70.020	Felis_catus
ENSPFOG00000013524	prpf4	99	71.779	ENSFALG00000005423	PRPF4	85	67.785	Ficedula_albicollis
ENSPFOG00000013524	prpf4	98	72.981	ENSFDAG00000005839	PRPF4	96	70.020	Fukomys_damarensis
ENSPFOG00000013524	prpf4	99	89.058	ENSFHEG00000001300	prpf4	100	85.019	Fundulus_heteroclitus
ENSPFOG00000013524	prpf4	99	72.393	ENSGALG00000008857	PRPF4	94	69.863	Gallus_gallus
ENSPFOG00000013524	prpf4	100	97.879	ENSGAFG00000012164	prpf4	68	97.879	Gambusia_affinis
ENSPFOG00000013524	prpf4	100	76.031	ENSGACG00000015476	prpf4	100	75.835	Gasterosteus_aculeatus
ENSPFOG00000013524	prpf4	99	71.779	ENSGAGG00000025029	PRPF4	94	69.667	Gopherus_agassizii
ENSPFOG00000013524	prpf4	98	73.292	ENSGGOG00000006943	PRPF4	96	70.217	Gorilla_gorilla
ENSPFOG00000013524	prpf4	99	89.970	ENSHBUG00000000562	prpf4	100	85.798	Haplochromis_burtoni
ENSPFOG00000013524	prpf4	98	73.292	ENSHGLG00000015191	PRPF4	96	70.217	Heterocephalus_glaber_female
ENSPFOG00000013524	prpf4	98	59.938	ENSHGLG00000003838	-	96	56.016	Heterocephalus_glaber_female
ENSPFOG00000013524	prpf4	93	64.935	ENSHGLG00000016628	-	95	60.041	Heterocephalus_glaber_female
ENSPFOG00000013524	prpf4	98	59.938	ENSHGLG00100005571	-	96	56.016	Heterocephalus_glaber_male
ENSPFOG00000013524	prpf4	99	73.860	ENSIPUG00000017956	PRPF4	100	71.790	Ictalurus_punctatus
ENSPFOG00000013524	prpf4	98	73.602	ENSSTOG00000027833	PRPF4	96	70.414	Ictidomys_tridecemlineatus
ENSPFOG00000013524	prpf4	98	72.981	ENSJJAG00000008838	Prpf4	96	70.020	Jaculus_jaculus
ENSPFOG00000013524	prpf4	99	88.146	ENSKMAG00000013236	prpf4	100	84.630	Kryptolebias_marmoratus
ENSPFOG00000013524	prpf4	99	88.146	ENSLBEG00000020611	prpf4	100	84.047	Labrus_bergylta
ENSPFOG00000013524	prpf4	99	65.861	ENSLACG00000016317	PRPF4	98	65.377	Latimeria_chalumnae
ENSPFOG00000013524	prpf4	99	77.508	ENSLOCG00000000581	prpf4	100	74.708	Lepisosteus_oculatus
ENSPFOG00000013524	prpf4	98	72.981	ENSLAFG00000018225	PRPF4	96	70.020	Loxodonta_africana
ENSPFOG00000013524	prpf4	98	72.981	ENSMFAG00000039397	PRPF4	96	69.822	Macaca_fascicularis
ENSPFOG00000013524	prpf4	98	72.981	ENSMMUG00000005844	PRPF4	96	70.020	Macaca_mulatta
ENSPFOG00000013524	prpf4	99	62.500	ENSMNEG00000033737	PRPF4	96	62.500	Macaca_nemestrina
ENSPFOG00000013524	prpf4	98	72.981	ENSMLEG00000040284	PRPF4	96	70.020	Mandrillus_leucophaeus
ENSPFOG00000013524	prpf4	99	86.626	ENSMAMG00000020141	prpf4	100	83.268	Mastacembelus_armatus
ENSPFOG00000013524	prpf4	99	89.970	ENSMZEG00005023205	prpf4	100	85.798	Maylandia_zebra
ENSPFOG00000013524	prpf4	99	71.472	ENSMGAG00000001796	PRPF4	94	69.276	Meleagris_gallopavo
ENSPFOG00000013524	prpf4	98	72.981	ENSMAUG00000018022	Prpf4	96	70.020	Mesocricetus_auratus
ENSPFOG00000013524	prpf4	98	72.981	ENSMICG00000015022	PRPF4	96	70.020	Microcebus_murinus
ENSPFOG00000013524	prpf4	98	72.981	ENSMOCG00000018273	Prpf4	96	70.020	Microtus_ochrogaster
ENSPFOG00000013524	prpf4	99	85.714	ENSMMOG00000021177	prpf4	100	81.907	Mola_mola
ENSPFOG00000013524	prpf4	99	70.245	ENSMODG00000025096	-	94	68.297	Monodelphis_domestica
ENSPFOG00000013524	prpf4	99	71.166	ENSMODG00000004444	-	97	68.689	Monodelphis_domestica
ENSPFOG00000013524	prpf4	99	88.146	ENSMALG00000013624	prpf4	100	84.436	Monopterus_albus
ENSPFOG00000013524	prpf4	98	72.981	MGP_CAROLIEiJ_G0026078	Prpf4	96	70.020	Mus_caroli
ENSPFOG00000013524	prpf4	98	72.981	ENSMUSG00000066148	Prpf4	96	70.020	Mus_musculus
ENSPFOG00000013524	prpf4	98	73.292	MGP_PahariEiJ_G0028413	Prpf4	96	70.217	Mus_pahari
ENSPFOG00000013524	prpf4	98	72.981	MGP_SPRETEiJ_G0027042	Prpf4	96	70.020	Mus_spretus
ENSPFOG00000013524	prpf4	98	72.981	ENSMPUG00000007883	PRPF4	96	70.020	Mustela_putorius_furo
ENSPFOG00000013524	prpf4	98	72.671	ENSMLUG00000015309	-	93	69.822	Myotis_lucifugus
ENSPFOG00000013524	prpf4	98	72.050	ENSMLUG00000008626	-	94	68.836	Myotis_lucifugus
ENSPFOG00000013524	prpf4	97	66.066	ENSNGAG00000000468	Prpf4	96	63.776	Nannospalax_galili
ENSPFOG00000013524	prpf4	99	89.970	ENSNBRG00000007972	prpf4	100	85.798	Neolamprologus_brichardi
ENSPFOG00000013524	prpf4	98	72.981	ENSNLEG00000016647	PRPF4	96	70.020	Nomascus_leucogenys
ENSPFOG00000013524	prpf4	99	71.166	ENSMEUG00000013256	PRPF4	98	68.885	Notamacropus_eugenii
ENSPFOG00000013524	prpf4	98	72.981	ENSOPRG00000005302	PRPF4	96	70.020	Ochotona_princeps
ENSPFOG00000013524	prpf4	98	72.981	ENSODEG00000018147	PRPF4	96	70.020	Octodon_degus
ENSPFOG00000013524	prpf4	99	90.274	ENSONIG00000012671	prpf4	100	85.798	Oreochromis_niloticus
ENSPFOG00000013524	prpf4	98	73.292	ENSOCUG00000005046	PRPF4	96	70.217	Oryctolagus_cuniculus
ENSPFOG00000013524	prpf4	99	84.195	ENSORLG00000019641	prpf4	100	81.712	Oryzias_latipes
ENSPFOG00000013524	prpf4	99	84.195	ENSORLG00020019438	prpf4	100	81.712	Oryzias_latipes_hni
ENSPFOG00000013524	prpf4	99	85.410	ENSOMEG00000020941	prpf4	100	81.725	Oryzias_melastigma
ENSPFOG00000013524	prpf4	97	67.712	ENSOGAG00000007802	PRPF4	94	66.469	Otolemur_garnettii
ENSPFOG00000013524	prpf4	98	72.981	ENSOARG00000006319	PRPF4	93	70.020	Ovis_aries
ENSPFOG00000013524	prpf4	98	73.292	ENSPPAG00000041797	PRPF4	96	70.217	Pan_paniscus
ENSPFOG00000013524	prpf4	98	72.981	ENSPPRG00000014360	PRPF4	96	70.020	Panthera_pardus
ENSPFOG00000013524	prpf4	98	72.981	ENSPTIG00000009574	PRPF4	96	70.020	Panthera_tigris_altaica
ENSPFOG00000013524	prpf4	98	73.292	ENSPTRG00000021274	PRPF4	96	70.217	Pan_troglodytes
ENSPFOG00000013524	prpf4	98	72.981	ENSPANG00000025776	PRPF4	92	70.217	Papio_anubis
ENSPFOG00000013524	prpf4	99	77.812	ENSPKIG00000017259	prpf4	100	74.319	Paramormyrops_kingsleyae
ENSPFOG00000013524	prpf4	99	72.393	ENSPSIG00000010713	PRPF4	89	69.472	Pelodiscus_sinensis
ENSPFOG00000013524	prpf4	99	63.838	ENSPMGG00000000997	prpf4	98	64.760	Periophthalmus_magnuspinnatus
ENSPFOG00000013524	prpf4	98	72.981	ENSPEMG00000024115	Prpf4	96	70.020	Peromyscus_maniculatus_bairdii
ENSPFOG00000013524	prpf4	99	70.859	ENSPCIG00000003821	PRPF4	98	68.689	Phascolarctos_cinereus
ENSPFOG00000013524	prpf4	99	97.546	ENSPLAG00000011620	prpf4	97	97.531	Poecilia_latipinna
ENSPFOG00000013524	prpf4	99	99.392	ENSPMEG00000006813	prpf4	99	97.612	Poecilia_mexicana
ENSPFOG00000013524	prpf4	98	73.292	ENSPCAG00000002561	PRPF4	97	70.217	Procavia_capensis
ENSPFOG00000013524	prpf4	98	73.292	ENSPCOG00000011975	PRPF4	96	70.217	Propithecus_coquereli
ENSPFOG00000013524	prpf4	98	68.012	ENSPVAG00000004708	PRPF4	96	66.864	Pteropus_vampyrus
ENSPFOG00000013524	prpf4	99	90.274	ENSPNYG00000008013	prpf4	100	85.992	Pundamilia_nyererei
ENSPFOG00000013524	prpf4	99	74.695	ENSPNAG00000000697	prpf4	100	72.763	Pygocentrus_nattereri
ENSPFOG00000013524	prpf4	98	72.981	ENSRNOG00000014777	Prpf4	96	70.020	Rattus_norvegicus
ENSPFOG00000013524	prpf4	98	72.981	ENSRBIG00000040221	PRPF4	96	70.020	Rhinopithecus_bieti
ENSPFOG00000013524	prpf4	98	72.981	ENSRROG00000040240	PRPF4	96	70.020	Rhinopithecus_roxellana
ENSPFOG00000013524	prpf4	99	70.859	ENSSHAG00000017658	PRPF4	97	68.689	Sarcophilus_harrisii
ENSPFOG00000013524	prpf4	99	77.508	ENSSFOG00015008963	prpf4	100	74.319	Scleropages_formosus
ENSPFOG00000013524	prpf4	99	86.930	ENSSMAG00000008889	prpf4	100	82.879	Scophthalmus_maximus
ENSPFOG00000013524	prpf4	99	89.058	ENSSDUG00000022083	prpf4	90	89.058	Seriola_dumerili
ENSPFOG00000013524	prpf4	99	88.754	ENSSLDG00000008115	prpf4	90	88.754	Seriola_lalandi_dorsalis
ENSPFOG00000013524	prpf4	99	72.561	ENSSPUG00000015582	PRPF4	98	69.709	Sphenodon_punctatus
ENSPFOG00000013524	prpf4	99	79.939	ENSSPAG00000011286	prpf4	100	78.337	Stegastes_partitus
ENSPFOG00000013524	prpf4	98	72.981	ENSSSCG00000024648	PRPF4	96	70.020	Sus_scrofa
ENSPFOG00000013524	prpf4	95	73.567	ENSTGUG00000002623	PRPF4	100	70.909	Taeniopygia_guttata
ENSPFOG00000013524	prpf4	99	83.587	ENSTRUG00000008853	prpf4	100	80.156	Takifugu_rubripes
ENSPFOG00000013524	prpf4	99	83.283	ENSTNIG00000013250	prpf4	98	83.283	Tetraodon_nigroviridis
ENSPFOG00000013524	prpf4	98	62.919	ENSTBEG00000000821	PRPF4	96	62.919	Tupaia_belangeri
ENSPFOG00000013524	prpf4	83	75.581	ENSTTRG00000003246	PRPF4	85	75.581	Tursiops_truncatus
ENSPFOG00000013524	prpf4	96	71.519	ENSUAMG00000018288	PRPF4	88	72.168	Ursus_americanus
ENSPFOG00000013524	prpf4	98	72.050	ENSUMAG00000019375	PRPF4	96	69.428	Ursus_maritimus
ENSPFOG00000013524	prpf4	98	72.671	ENSVPAG00000005281	PRPF4	96	69.822	Vicugna_pacos
ENSPFOG00000013524	prpf4	98	71.779	ENSVVUG00000002476	PRPF4	99	69.276	Vulpes_vulpes
ENSPFOG00000013524	prpf4	68	83.408	ENSXCOG00000006101	prpf4	93	66.015	Xiphophorus_couchianus
ENSPFOG00000013524	prpf4	99	96.960	ENSXMAG00000002750	prpf4	100	78.252	Xiphophorus_maculatus