EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPFOG00000013583 (Gene tree)
Gene ID: -
Gene Symbol: cth1
Alias: -
Full Name: cysteine three histidine 1
Gene Type: protein_coding
Species: Poecilia_formosa
Status: putative
Strand: Plus strand
Length: 2712 bases
Position: chrKI519824.1:681037-683748
Accession: ZDB-GENE-990806-20
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPFOP00000013586	zf-CCCH	PF00642.24	4.3e-29	1	3
ENSPFOP00000013586	zf-CCCH	PF00642.24	4.3e-29	2	3
ENSPFOP00000013586	zf-CCCH	PF00642.24	4.3e-29	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPFOT00000013605	-	1972	-	ENSPFOP00000013586	323 (aa)	-	A0A087Y6D3

Gene Model

Click here to download ENSPFOG00000013583's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000013583's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPFOG00000013583	cth1	78	34.387	ENSPFOG00000019857	zfp36l2	50	33.721
ENSPFOG00000013583	cth1	78	34.387	ENSPFOG00000019858	ZFP36L2	50	33.721

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPFOG00000013583	cth1	84	64.260	ENSAPOG00000012552	cth1	99	66.667	Acanthochromis_polyacanthus
ENSPFOG00000013583	cth1	82	58.929	ENSACIG00000016026	cth1	99	56.075	Amphilophus_citrinellus
ENSPFOG00000013583	cth1	94	63.376	ENSAOCG00000001644	cth1	100	65.190	Amphiprion_ocellaris
ENSPFOG00000013583	cth1	94	63.376	ENSAPEG00000008930	cth1	100	65.190	Amphiprion_percula
ENSPFOG00000013583	cth1	93	65.337	ENSATEG00000002281	cth1	97	65.015	Anabas_testudineus
ENSPFOG00000013583	cth1	84	56.940	ENSACLG00000015353	cth1	100	55.892	Astatotilapia_calliptera
ENSPFOG00000013583	cth1	90	53.674	ENSAMXG00000025717	cth1	98	54.313	Astyanax_mexicanus
ENSPFOG00000013583	cth1	94	58.879	ENSCSEG00000014617	cth1	100	59.568	Cynoglossus_semilaevis
ENSPFOG00000013583	cth1	94	66.993	ENSCVAG00000001680	cth1	65	66.993	Cyprinodon_variegatus
ENSPFOG00000013583	cth1	85	51.890	ENSDARG00000057328	cth1	99	53.086	Danio_rerio
ENSPFOG00000013583	cth1	93	48.665	ENSELUG00000012738	cth1	99	49.107	Esox_lucius
ENSPFOG00000013583	cth1	94	70.701	ENSFHEG00000022665	cth1	100	71.338	Fundulus_heteroclitus
ENSPFOG00000013583	cth1	93	56.918	ENSGMOG00000007360	cth1	100	55.280	Gadus_morhua
ENSPFOG00000013583	cth1	94	85.759	ENSGAFG00000019288	cth1	100	85.759	Gambusia_affinis
ENSPFOG00000013583	cth1	93	59.744	ENSGACG00000000802	cth1	99	59.744	Gasterosteus_aculeatus
ENSPFOG00000013583	cth1	94	57.325	ENSHBUG00000014400	cth1	100	55.521	Haplochromis_burtoni
ENSPFOG00000013583	cth1	92	50.671	ENSHCOG00000010276	cth1	98	50.671	Hippocampus_comes
ENSPFOG00000013583	cth1	91	53.698	ENSIPUG00000018040	cth1	95	55.016	Ictalurus_punctatus
ENSPFOG00000013583	cth1	94	61.736	ENSKMAG00000005944	cth1	100	62.701	Kryptolebias_marmoratus
ENSPFOG00000013583	cth1	94	63.043	ENSLBEG00000019253	cth1	100	63.125	Labrus_bergylta
ENSPFOG00000013583	cth1	62	50.242	ENSLOCG00000002047	cth1	97	50.242	Lepisosteus_oculatus
ENSPFOG00000013583	cth1	93	48.248	ENSMAMG00000001525	cth1	99	48.656	Mastacembelus_armatus
ENSPFOG00000013583	cth1	94	57.962	ENSMZEG00005022335	cth1	100	56.151	Maylandia_zebra
ENSPFOG00000013583	cth1	88	62.829	ENSMMOG00000020518	cth1	100	63.816	Mola_mola
ENSPFOG00000013583	cth1	94	50.402	ENSMALG00000020738	cth1	58	58.824	Monopterus_albus
ENSPFOG00000013583	cth1	82	59.701	ENSNBRG00000022789	cth1	88	58.303	Neolamprologus_brichardi
ENSPFOG00000013583	cth1	93	57.862	ENSONIG00000021318	cth1	99	56.211	Oreochromis_niloticus
ENSPFOG00000013583	cth1	94	55.591	ENSORLG00000022847	cth1	100	59.236	Oryzias_latipes
ENSPFOG00000013583	cth1	94	55.911	ENSORLG00020011979	cth1	100	57.595	Oryzias_latipes_hni
ENSPFOG00000013583	cth1	94	55.911	ENSORLG00015013084	cth1	100	59.105	Oryzias_latipes_hsok
ENSPFOG00000013583	cth1	94	55.627	ENSOMEG00000005809	cth1	85	57.235	Oryzias_melastigma
ENSPFOG00000013583	cth1	91	50.473	ENSPKIG00000015883	cth1	95	49.045	Paramormyrops_kingsleyae
ENSPFOG00000013583	cth1	93	58.133	ENSPMGG00000004275	cth1	100	58.967	Periophthalmus_magnuspinnatus
ENSPFOG00000013583	cth1	100	98.762	ENSPLAG00000018158	cth1	100	98.762	Poecilia_latipinna
ENSPFOG00000013583	cth1	94	99.340	ENSPMEG00000005744	cth1	100	99.340	Poecilia_mexicana
ENSPFOG00000013583	cth1	93	93.377	ENSPREG00000004099	cth1	100	93.377	Poecilia_reticulata
ENSPFOG00000013583	cth1	82	59.108	ENSPNYG00000016705	cth1	91	57.721	Pundamilia_nyererei
ENSPFOG00000013583	cth1	90	53.674	ENSPNAG00000013147	cth1	98	53.438	Pygocentrus_nattereri
ENSPFOG00000013583	cth1	81	56.727	ENSSFOG00015017190	cth1	87	54.874	Scleropages_formosus
ENSPFOG00000013583	cth1	94	62.928	ENSSMAG00000007977	cth1	100	66.667	Scophthalmus_maximus
ENSPFOG00000013583	cth1	94	64.634	ENSSDUG00000004321	cth1	100	65.244	Seriola_dumerili
ENSPFOG00000013583	cth1	94	63.526	ENSSLDG00000004516	-	100	64.134	Seriola_lalandi_dorsalis
ENSPFOG00000013583	cth1	93	63.720	ENSSLDG00000010023	-	100	64.329	Seriola_lalandi_dorsalis
ENSPFOG00000013583	cth1	94	64.134	ENSSLDG00000012760	cth1	100	64.742	Seriola_lalandi_dorsalis
ENSPFOG00000013583	cth1	94	62.025	ENSSPAG00000018659	cth1	100	66.139	Stegastes_partitus
ENSPFOG00000013583	cth1	94	59.561	ENSTRUG00000012770	cth1	100	59.561	Takifugu_rubripes
ENSPFOG00000013583	cth1	94	57.994	ENSTNIG00000000740	cth1	100	57.994	Tetraodon_nigroviridis
ENSPFOG00000013583	cth1	77	76.210	ENSXCOG00000003710	cth1	88	75.904	Xiphophorus_couchianus
ENSPFOG00000013583	cth1	94	86.943	ENSXMAG00000023885	cth1	100	86.943	Xiphophorus_maculatus