EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPFOG00000013669 (Gene tree)
Gene ID: 103144989
Gene Symbol: setd1a
Alias: -
Full Name: SET domain containing 1A
Gene Type: protein_coding
Species: Poecilia_formosa
Status: putative
Strand: Minus strand
Length: 30468 bases
Position: chrKI519744.1:1519307-1549774
Accession: ZDB-GENE-080521-4
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPFOP00000013714	RRM_1	PF00076.22	1.6e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPFOT00000013733	-	8658	-	ENSPFOP00000013714	2121 (aa)	-	A0A087Y6R1

Gene Model

Click here to download ENSPFOG00000013669's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000013669's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPFOG00000013669	setd1a	58	65.714	ENSPFOG00000019768	setd1ba	54	65.714

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPFOG00000013669	setd1a	83	95.050	ENSAPOG00000018002	setd1a	79	92.925	Acanthochromis_polyacanthus
ENSPFOG00000013669	setd1a	78	91.875	ENSACIG00000007144	setd1a	99	92.163	Amphilophus_citrinellus
ENSPFOG00000013669	setd1a	100	78.187	ENSAOCG00000003663	setd1a	100	78.276	Amphiprion_ocellaris
ENSPFOG00000013669	setd1a	100	75.090	ENSATEG00000022798	setd1a	100	75.359	Anabas_testudineus
ENSPFOG00000013669	setd1a	52	61.438	ENSACAG00000007606	-	66	75.676	Anolis_carolinensis
ENSPFOG00000013669	setd1a	100	77.758	ENSACLG00000024747	setd1a	100	78.255	Astatotilapia_calliptera
ENSPFOG00000013669	setd1a	100	74.355	ENSCSEG00000021605	setd1a	100	71.855	Cynoglossus_semilaevis
ENSPFOG00000013669	setd1a	100	83.765	ENSCVAG00000011672	setd1a	100	82.409	Cyprinodon_variegatus
ENSPFOG00000013669	setd1a	100	57.765	ENSDARG00000060030	setd1a	73	58.535	Danio_rerio
ENSPFOG00000013669	setd1a	89	81.339	ENSFHEG00000023258	setd1a	97	88.889	Fundulus_heteroclitus
ENSPFOG00000013669	setd1a	61	97.101	ENSGAFG00000011698	setd1a	83	95.833	Gambusia_affinis
ENSPFOG00000013669	setd1a	52	84.110	ENSGACG00000013688	setd1a	68	85.792	Gasterosteus_aculeatus
ENSPFOG00000013669	setd1a	100	78.255	ENSHBUG00000008893	setd1a	100	78.581	Haplochromis_burtoni
ENSPFOG00000013669	setd1a	75	85.795	ENSHCOG00000003119	setd1a	94	90.244	Hippocampus_comes
ENSPFOG00000013669	setd1a	100	77.873	ENSKMAG00000009484	setd1a	100	78.008	Kryptolebias_marmoratus
ENSPFOG00000013669	setd1a	70	73.859	ENSLBEG00000004399	setd1a	100	73.500	Labrus_bergylta
ENSPFOG00000013669	setd1a	72	90.310	ENSMAMG00000021851	setd1a	97	90.310	Mastacembelus_armatus
ENSPFOG00000013669	setd1a	100	77.667	ENSMZEG00005023141	setd1a	100	78.165	Maylandia_zebra
ENSPFOG00000013669	setd1a	52	82.432	ENSMAUG00000008959	-	55	80.782	Mesocricetus_auratus
ENSPFOG00000013669	setd1a	72	92.550	ENSMMOG00000016992	setd1a	98	93.333	Mola_mola
ENSPFOG00000013669	setd1a	99	69.726	ENSMALG00000007401	setd1a	98	70.246	Monopterus_albus
ENSPFOG00000013669	setd1a	55	82.095	MGP_CAROLIEiJ_G0030519	-	100	71.717	Mus_caroli
ENSPFOG00000013669	setd1a	52	82.095	ENSMUSG00000042308	Setd1a	100	71.717	Mus_musculus
ENSPFOG00000013669	setd1a	55	82.095	MGP_PahariEiJ_G0013726	-	100	71.717	Mus_pahari
ENSPFOG00000013669	setd1a	55	82.095	MGP_SPRETEiJ_G0031633	Setd1a	100	71.212	Mus_spretus
ENSPFOG00000013669	setd1a	74	73.794	ENSNBRG00000004760	setd1a	100	73.970	Neolamprologus_brichardi
ENSPFOG00000013669	setd1a	53	81.849	ENSMEUG00000003396	-	59	75.000	Notamacropus_eugenii
ENSPFOG00000013669	setd1a	100	74.344	ENSORLG00000002213	setd1a	100	74.480	Oryzias_latipes
ENSPFOG00000013669	setd1a	100	74.401	ENSORLG00020011897	setd1a	100	74.570	Oryzias_latipes_hni
ENSPFOG00000013669	setd1a	100	74.830	ENSORLG00015004826	setd1a	100	74.909	Oryzias_latipes_hsok
ENSPFOG00000013669	setd1a	100	74.511	ENSOMEG00000019732	setd1a	100	74.750	Oryzias_melastigma
ENSPFOG00000013669	setd1a	50	77.287	ENSPSIG00000005027	-	68	78.302	Pelodiscus_sinensis
ENSPFOG00000013669	setd1a	100	97.413	ENSPLAG00000009294	setd1a	100	97.413	Poecilia_latipinna
ENSPFOG00000013669	setd1a	100	96.911	ENSPMEG00000005864	setd1a	100	96.911	Poecilia_mexicana
ENSPFOG00000013669	setd1a	100	95.295	ENSPREG00000010201	setd1a	100	95.295	Poecilia_reticulata
ENSPFOG00000013669	setd1a	100	78.125	ENSPNYG00000014139	setd1a	100	78.281	Pundamilia_nyererei
ENSPFOG00000013669	setd1a	100	57.277	ENSPNAG00000019165	setd1a	100	58.084	Pygocentrus_nattereri
ENSPFOG00000013669	setd1a	58	54.922	ENSSFOG00015007013	setd1a	59	55.885	Scleropages_formosus
ENSPFOG00000013669	setd1a	100	75.249	ENSSMAG00000008846	setd1a	100	74.661	Scophthalmus_maximus
ENSPFOG00000013669	setd1a	100	77.907	ENSSDUG00000022142	setd1a	100	76.975	Seriola_dumerili
ENSPFOG00000013669	setd1a	100	77.952	ENSSLDG00000018250	setd1a	100	77.020	Seriola_lalandi_dorsalis
ENSPFOG00000013669	setd1a	100	77.923	ENSSPAG00000007822	setd1a	100	78.327	Stegastes_partitus
ENSPFOG00000013669	setd1a	58	74.697	ENSTRUG00000008953	setd1a	99	74.878	Takifugu_rubripes
ENSPFOG00000013669	setd1a	80	88.830	ENSTNIG00000014930	setd1a	84	76.420	Tetraodon_nigroviridis
ENSPFOG00000013669	setd1a	95	92.998	ENSXCOG00000017585	setd1a	59	89.118	Xiphophorus_couchianus
ENSPFOG00000013669	setd1a	100	94.432	ENSXMAG00000008021	setd1a	100	94.432	Xiphophorus_maculatus