EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPFOG00000013683 (Gene tree)
Gene ID: 103148892
Gene Symbol: sf1
Alias: -
Full Name: splicing factor 1
Gene Type: protein_coding
Species: Poecilia_formosa
Status: putative
Strand: Plus strand
Length: 13382 bases
Position: chrKI519824.1:694069-707450
Accession: 103148892
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPFOP00000027604	KH_1	PF00013.29	2.7e-06	1	1
ENSPFOP00000013764	KH_1	PF00013.29	3.2e-06	1	1
ENSPFOP00000027604	zf-CCHC	PF00098.23	0.00038	1	1
ENSPFOP00000013764	zf-CCHC	PF00098.23	0.00047	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPFOT00000022779	-	1776	-	ENSPFOP00000027604	591 (aa)	-	A0A096M863
ENSPFOT00000013783	-	3343	-	ENSPFOP00000013764	676 (aa)	XP_007567934	A0A087Y6W1

Gene Model

Click here to download ENSPFOG00000013683's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000013683's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPFOG00000013683	sf1	97	90.152	ENSAPOG00000012341	sf1	97	89.242	Acanthochromis_polyacanthus
ENSPFOG00000013683	sf1	66	80.779	ENSAMEG00000017828	SF1	58	85.445	Ailuropoda_melanoleuca
ENSPFOG00000013683	sf1	61	92.077	ENSACIG00000016514	sf1	57	92.077	Amphilophus_citrinellus
ENSPFOG00000013683	sf1	97	90.288	ENSAOCG00000010934	sf1	97	90.288	Amphiprion_ocellaris
ENSPFOG00000013683	sf1	97	90.288	ENSAPEG00000009498	sf1	97	90.288	Amphiprion_percula
ENSPFOG00000013683	sf1	67	89.254	ENSATEG00000001894	sf1	97	89.848	Anabas_testudineus
ENSPFOG00000013683	sf1	68	81.146	ENSANAG00000026664	-	91	85.752	Aotus_nancymaae
ENSPFOG00000013683	sf1	96	63.500	ENSANAG00000022607	-	88	76.374	Aotus_nancymaae
ENSPFOG00000013683	sf1	61	94.199	ENSACLG00000007633	sf1	84	75.541	Astatotilapia_calliptera
ENSPFOG00000013683	sf1	61	91.758	ENSAMXG00000003630	sf1	86	84.323	Astyanax_mexicanus
ENSPFOG00000013683	sf1	68	81.146	ENSBTAG00000001035	SF1	63	85.752	Bos_taurus
ENSPFOG00000013683	sf1	68	81.146	ENSCJAG00000002780	SF1	59	85.752	Callithrix_jacchus
ENSPFOG00000013683	sf1	68	81.146	ENSCAFG00000014239	SF1	59	85.752	Canis_familiaris
ENSPFOG00000013683	sf1	68	81.146	ENSCAFG00020014381	SF1	59	85.752	Canis_lupus_dingo
ENSPFOG00000013683	sf1	68	81.146	ENSCHIG00000025867	SF1	69	85.752	Capra_hircus
ENSPFOG00000013683	sf1	67	72.818	ENSTSYG00000033618	SF1	82	93.190	Carlito_syrichta
ENSPFOG00000013683	sf1	66	79.361	ENSCAPG00000010762	SF1	66	85.326	Cavia_aperea
ENSPFOG00000013683	sf1	66	79.512	ENSCPOG00000012290	SF1	69	85.326	Cavia_porcellus
ENSPFOG00000013683	sf1	68	73.479	ENSCCAG00000023781	-	84	75.989	Cebus_capucinus
ENSPFOG00000013683	sf1	68	82.524	ENSCCAG00000037881	SF1	91	85.752	Cebus_capucinus
ENSPFOG00000013683	sf1	68	81.146	ENSCATG00000011564	SF1	91	85.752	Cercocebus_atys
ENSPFOG00000013683	sf1	68	81.146	ENSCSAG00000007258	SF1	69	85.752	Chlorocebus_sabaeus
ENSPFOG00000013683	sf1	63	75.385	ENSCHOG00000006008	SF1	66	79.714	Choloepus_hoffmanni
ENSPFOG00000013683	sf1	53	66.981	ENSCING00000005564	-	83	56.738	Ciona_intestinalis
ENSPFOG00000013683	sf1	82	49.281	ENSCSAVG00000009055	-	72	62.215	Ciona_savignyi
ENSPFOG00000013683	sf1	68	81.146	ENSCANG00000042201	SF1	91	85.752	Colobus_angolensis_palliatus
ENSPFOG00000013683	sf1	68	81.384	ENSCGRG00001003677	Sf1	66	86.280	Cricetulus_griseus_chok1gshd
ENSPFOG00000013683	sf1	66	80.882	ENSCGRG00000001708	Sf1	68	85.870	Cricetulus_griseus_crigri
ENSPFOG00000013683	sf1	97	87.595	ENSCSEG00000014375	sf1	94	87.860	Cynoglossus_semilaevis
ENSPFOG00000013683	sf1	98	95.008	ENSCVAG00000001670	sf1	97	94.073	Cyprinodon_variegatus
ENSPFOG00000013683	sf1	84	84.507	ENSDARG00000008188	sf1	97	84.580	Danio_rerio
ENSPFOG00000013683	sf1	68	81.384	ENSDNOG00000001282	SF1	69	85.752	Dasypus_novemcinctus
ENSPFOG00000013683	sf1	68	81.146	ENSDORG00000016334	Sf1	59	85.752	Dipodomys_ordii
ENSPFOG00000013683	sf1	66	73.710	ENSETEG00000012830	SF1	51	76.902	Echinops_telfairi
ENSPFOG00000013683	sf1	100	47.082	ENSEBUG00000012728	sf1	51	62.766	Eptatretus_burgeri
ENSPFOG00000013683	sf1	68	81.146	ENSEASG00005018272	SF1	69	85.752	Equus_asinus_asinus
ENSPFOG00000013683	sf1	68	81.384	ENSECAG00000024544	SF1	69	86.016	Equus_caballus
ENSPFOG00000013683	sf1	59	80.822	ENSEEUG00000001058	SF1	83	85.846	Erinaceus_europaeus
ENSPFOG00000013683	sf1	78	77.551	ENSELUG00000013225	sf1	60	83.226	Esox_lucius
ENSPFOG00000013683	sf1	68	81.146	ENSFCAG00000012231	SF1	75	69.804	Felis_catus
ENSPFOG00000013683	sf1	66	80.637	ENSFDAG00000009833	SF1	66	85.326	Fukomys_damarensis
ENSPFOG00000013683	sf1	97	90.122	ENSFHEG00000022656	sf1	97	89.666	Fundulus_heteroclitus
ENSPFOG00000013683	sf1	72	80.505	ENSGMOG00000007469	sf1	61	92.560	Gadus_morhua
ENSPFOG00000013683	sf1	91	98.699	ENSGAFG00000019284	sf1	100	98.699	Gambusia_affinis
ENSPFOG00000013683	sf1	63	90.601	ENSGACG00000000826	sf1	64	92.663	Gasterosteus_aculeatus
ENSPFOG00000013683	sf1	69	83.855	ENSGAGG00000021691	SF1	68	71.545	Gopherus_agassizii
ENSPFOG00000013683	sf1	67	90.769	ENSHBUG00000011598	sf1	97	89.879	Haplochromis_burtoni
ENSPFOG00000013683	sf1	68	81.146	ENSHGLG00000009541	SF1	66	85.752	Heterocephalus_glaber_female
ENSPFOG00000013683	sf1	66	80.637	ENSHGLG00100013879	-	66	85.326	Heterocephalus_glaber_male
ENSPFOG00000013683	sf1	51	86.424	ENSHGLG00100008076	-	68	81.081	Heterocephalus_glaber_male
ENSPFOG00000013683	sf1	68	70.183	ENSHGLG00100008255	-	87	68.080	Heterocephalus_glaber_male
ENSPFOG00000013683	sf1	69	85.957	ENSHCOG00000011388	sf1	97	86.191	Hippocampus_comes
ENSPFOG00000013683	sf1	66	80.637	ENSSTOG00000009790	-	59	85.326	Ictidomys_tridecemlineatus
ENSPFOG00000013683	sf1	70	71.765	ENSSTOG00000024353	-	66	75.339	Ictidomys_tridecemlineatus
ENSPFOG00000013683	sf1	68	81.384	ENSJJAG00000011788	Sf1	59	86.016	Jaculus_jaculus
ENSPFOG00000013683	sf1	68	92.157	ENSKMAG00000005854	sf1	87	91.930	Kryptolebias_marmoratus
ENSPFOG00000013683	sf1	83	88.602	ENSLBEG00000019836	sf1	75	92.493	Labrus_bergylta
ENSPFOG00000013683	sf1	76	89.946	ENSLOCG00000002130	sf1	72	81.277	Lepisosteus_oculatus
ENSPFOG00000013683	sf1	68	79.245	ENSLAFG00000007201	SF1	63	84.574	Loxodonta_africana
ENSPFOG00000013683	sf1	68	81.146	ENSMFAG00000033122	SF1	91	85.752	Macaca_fascicularis
ENSPFOG00000013683	sf1	68	81.146	ENSMMUG00000022606	SF1	90	85.405	Macaca_mulatta
ENSPFOG00000013683	sf1	68	81.146	ENSMNEG00000037901	SF1	91	85.752	Macaca_nemestrina
ENSPFOG00000013683	sf1	68	79.475	ENSMLEG00000040706	SF1	91	83.905	Mandrillus_leucophaeus
ENSPFOG00000013683	sf1	67	91.009	ENSMAMG00000001780	sf1	97	90.606	Mastacembelus_armatus
ENSPFOG00000013683	sf1	67	90.769	ENSMZEG00005009196	sf1	97	89.879	Maylandia_zebra
ENSPFOG00000013683	sf1	68	81.384	ENSMAUG00000014064	Sf1	66	86.280	Mesocricetus_auratus
ENSPFOG00000013683	sf1	68	81.146	ENSMICG00000001202	SF1	91	85.526	Microcebus_murinus
ENSPFOG00000013683	sf1	68	81.146	ENSMOCG00000022038	Sf1	66	86.016	Microtus_ochrogaster
ENSPFOG00000013683	sf1	61	93.370	ENSMMOG00000020474	sf1	66	87.061	Mola_mola
ENSPFOG00000013683	sf1	66	80.779	ENSMODG00000029407	SF1	80	85.676	Monodelphis_domestica
ENSPFOG00000013683	sf1	61	93.407	ENSMALG00000020521	sf1	72	84.649	Monopterus_albus
ENSPFOG00000013683	sf1	68	81.384	MGP_CAROLIEiJ_G0022607	Sf1	99	95.489	Mus_caroli
ENSPFOG00000013683	sf1	68	81.384	ENSMUSG00000024949	Sf1	99	95.489	Mus_musculus
ENSPFOG00000013683	sf1	68	81.384	MGP_PahariEiJ_G0014101	Sf1	99	95.489	Mus_pahari
ENSPFOG00000013683	sf1	68	81.384	MGP_SPRETEiJ_G0023518	Sf1	99	95.489	Mus_spretus
ENSPFOG00000013683	sf1	66	81.022	ENSMPUG00000012684	SF1	58	85.445	Mustela_putorius_furo
ENSPFOG00000013683	sf1	72	77.376	ENSMLUG00000029800	-	65	82.058	Myotis_lucifugus
ENSPFOG00000013683	sf1	66	80.779	ENSMLUG00000015217	-	58	85.445	Myotis_lucifugus
ENSPFOG00000013683	sf1	68	81.384	ENSNGAG00000005550	Sf1	66	86.016	Nannospalax_galili
ENSPFOG00000013683	sf1	61	94.199	ENSNBRG00000017606	sf1	97	73.837	Neolamprologus_brichardi
ENSPFOG00000013683	sf1	68	81.146	ENSNLEG00000005236	-	91	85.752	Nomascus_leucogenys
ENSPFOG00000013683	sf1	65	80.846	ENSMEUG00000013424	SF1	68	85.912	Notamacropus_eugenii
ENSPFOG00000013683	sf1	59	81.096	ENSOPRG00000005008	SF1	66	86.154	Ochotona_princeps
ENSPFOG00000013683	sf1	68	78.759	ENSODEG00000006102	-	60	83.113	Octodon_degus
ENSPFOG00000013683	sf1	67	90.549	ENSONIG00000015728	sf1	97	89.728	Oreochromis_niloticus
ENSPFOG00000013683	sf1	55	76.176	ENSOANG00000002909	SF1	76	77.097	Ornithorhynchus_anatinus
ENSPFOG00000013683	sf1	66	80.779	ENSOCUG00000026486	SF1	59	85.445	Oryctolagus_cuniculus
ENSPFOG00000013683	sf1	69	88.060	ENSORLG00000011853	sf1	66	89.648	Oryzias_latipes
ENSPFOG00000013683	sf1	69	88.060	ENSORLG00020011834	sf1	66	89.648	Oryzias_latipes_hni
ENSPFOG00000013683	sf1	68	88.184	ENSORLG00015012855	sf1	66	88.767	Oryzias_latipes_hsok
ENSPFOG00000013683	sf1	68	90.153	ENSOMEG00000005210	sf1	97	89.514	Oryzias_melastigma
ENSPFOG00000013683	sf1	68	81.146	ENSOGAG00000016196	SF1	58	83.862	Otolemur_garnettii
ENSPFOG00000013683	sf1	68	81.146	ENSOARG00000009166	SF1	66	85.752	Ovis_aries
ENSPFOG00000013683	sf1	67	81.022	ENSPPAG00000002799	-	91	84.987	Pan_paniscus
ENSPFOG00000013683	sf1	66	80.685	ENSPPRG00000013566	SF1	57	86.648	Panthera_pardus
ENSPFOG00000013683	sf1	67	80.630	ENSPTIG00000016141	SF1	67	85.255	Panthera_tigris_altaica
ENSPFOG00000013683	sf1	69	81.265	ENSPTRG00000003846	SF1	91	85.752	Pan_troglodytes
ENSPFOG00000013683	sf1	68	81.146	ENSPANG00000020754	SF1	91	85.752	Papio_anubis
ENSPFOG00000013683	sf1	53	81.571	ENSPKIG00000012116	sf1	79	81.672	Paramormyrops_kingsleyae
ENSPFOG00000013683	sf1	51	82.958	ENSPSIG00000003610	SF1	52	86.822	Pelodiscus_sinensis
ENSPFOG00000013683	sf1	68	81.384	ENSPEMG00000010463	Sf1	66	86.280	Peromyscus_maniculatus_bairdii
ENSPFOG00000013683	sf1	68	81.384	ENSPCIG00000018173	SF1	61	86.016	Phascolarctos_cinereus
ENSPFOG00000013683	sf1	93	99.524	ENSPLAG00000018076	sf1	96	99.524	Poecilia_latipinna
ENSPFOG00000013683	sf1	100	99.852	ENSPMEG00000005726	sf1	100	99.852	Poecilia_mexicana
ENSPFOG00000013683	sf1	100	98.373	ENSPREG00000004155	sf1	100	98.373	Poecilia_reticulata
ENSPFOG00000013683	sf1	68	81.146	ENSPPYG00000003098	-	72	85.752	Pongo_abelii
ENSPFOG00000013683	sf1	66	80.440	ENSPCAG00000013631	SF1	75	68.885	Procavia_capensis
ENSPFOG00000013683	sf1	68	81.146	ENSPCOG00000027546	SF1	91	85.526	Propithecus_coquereli
ENSPFOG00000013683	sf1	66	80.929	ENSPVAG00000016938	SF1	75	70.891	Pteropus_vampyrus
ENSPFOG00000013683	sf1	67	90.549	ENSPNYG00000004673	sf1	97	89.728	Pundamilia_nyererei
ENSPFOG00000013683	sf1	61	90.191	ENSPNAG00000013072	sf1	97	83.333	Pygocentrus_nattereri
ENSPFOG00000013683	sf1	68	81.384	ENSRNOG00000021085	Sf1	60	86.047	Rattus_norvegicus
ENSPFOG00000013683	sf1	68	81.146	ENSRBIG00000042818	SF1	91	85.752	Rhinopithecus_bieti
ENSPFOG00000013683	sf1	68	79.475	ENSRROG00000045655	SF1	91	83.905	Rhinopithecus_roxellana
ENSPFOG00000013683	sf1	67	37.857	YLR116W	MSL5	58	42.955	Saccharomyces_cerevisiae
ENSPFOG00000013683	sf1	85	63.339	ENSSBOG00000022267	-	90	72.105	Saimiri_boliviensis_boliviensis
ENSPFOG00000013683	sf1	71	78.291	ENSSHAG00000006841	SF1	70	84.840	Sarcophilus_harrisii
ENSPFOG00000013683	sf1	71	80.538	ENSSFOG00015021978	sf1	66	82.018	Scleropages_formosus
ENSPFOG00000013683	sf1	84	85.763	ENSSMAG00000007549	sf1	70	89.130	Scophthalmus_maximus
ENSPFOG00000013683	sf1	67	90.372	ENSSDUG00000003903	sf1	98	90.312	Seriola_dumerili
ENSPFOG00000013683	sf1	62	92.084	ENSSLDG00000013075	sf1	97	87.595	Seriola_lalandi_dorsalis
ENSPFOG00000013683	sf1	66	76.471	ENSSARG00000008180	SF1	71	80.707	Sorex_araneus
ENSPFOG00000013683	sf1	66	80.476	ENSSPUG00000012907	SF1	58	89.017	Sphenodon_punctatus
ENSPFOG00000013683	sf1	97	90.288	ENSSPAG00000019060	sf1	97	90.288	Stegastes_partitus
ENSPFOG00000013683	sf1	68	81.146	ENSSSCG00000013021	SF1	69	85.752	Sus_scrofa
ENSPFOG00000013683	sf1	86	74.248	ENSTNIG00000004820	sf1	74	79.434	Tetraodon_nigroviridis
ENSPFOG00000013683	sf1	66	74.510	ENSTBEG00000013133	SF1	54	76.944	Tupaia_belangeri
ENSPFOG00000013683	sf1	66	75.735	ENSTTRG00000008857	SF1	68	80.435	Tursiops_truncatus
ENSPFOG00000013683	sf1	66	82.673	ENSUMAG00000007268	SF1	71	85.445	Ursus_maritimus
ENSPFOG00000013683	sf1	68	81.146	ENSVVUG00000028585	SF1	69	85.752	Vulpes_vulpes
ENSPFOG00000013683	sf1	97	68.855	ENSXETG00000008434	sf1	63	86.351	Xenopus_tropicalis
ENSPFOG00000013683	sf1	84	94.177	ENSXCOG00000003704	sf1	94	94.177	Xiphophorus_couchianus
ENSPFOG00000013683	sf1	100	98.964	ENSXMAG00000007822	sf1	100	98.964	Xiphophorus_maculatus