EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPFOG00000013810 (Gene tree)
Gene ID: 103138241
Gene Symbol: zgc:171927
Alias: -
Full Name: zgc:171927
Gene Type: protein_coding
Species: Poecilia_formosa
Status: putative
Strand: Plus strand
Length: 4325 bases
Position: chrKI519658.1:902271-906595
Accession: ZDB-GENE-070822-21
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPFOP00000013841	MMR_HSR1	PF01926.23	7e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPFOT00000013860	-	654	-	ENSPFOP00000013841	217 (aa)	-	A0A087Y738

Gene Model

Click here to download ENSPFOG00000013810's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000013810's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPFOG00000013810	zgc:171927	100	71.429	ENSPFOG00000012594	rab1ba	95	71.429
ENSPFOG00000013810	zgc:171927	87	32.124	ENSPFOG00000008678	si:cabz01085950.1	92	32.124
ENSPFOG00000013810	zgc:171927	77	52.976	ENSPFOG00000009284	rab11a	78	52.976
ENSPFOG00000013810	zgc:171927	90	36.946	ENSPFOG00000019509	rab6a	92	36.946
ENSPFOG00000013810	zgc:171927	78	43.931	ENSPFOG00000006314	-	71	43.931
ENSPFOG00000013810	zgc:171927	79	46.512	ENSPFOG00000001579	rab12	70	46.512
ENSPFOG00000013810	zgc:171927	54	31.667	ENSPFOG00000020164	arl4aa	59	31.667
ENSPFOG00000013810	zgc:171927	95	34.112	ENSPFOG00000024704	rab9a	97	34.112
ENSPFOG00000013810	zgc:171927	74	51.852	ENSPFOG00000007571	rab18a	75	53.548
ENSPFOG00000013810	zgc:171927	77	50.595	ENSPFOG00000006224	-	77	50.595
ENSPFOG00000013810	zgc:171927	85	41.872	ENSPFOG00000001167	-	94	41.872
ENSPFOG00000013810	zgc:171927	78	44.706	ENSPFOG00000019821	RAB14	79	44.706
ENSPFOG00000013810	zgc:171927	77	50.595	ENSPFOG00000024114	-	77	50.595
ENSPFOG00000013810	zgc:171927	76	39.645	ENSPFOG00000003934	-	82	39.645
ENSPFOG00000013810	zgc:171927	77	38.983	ENSPFOG00000011444	rab34b	69	38.983
ENSPFOG00000013810	zgc:171927	56	34.146	ENSPFOG00000024387	rras2	72	34.146
ENSPFOG00000013810	zgc:171927	78	50.296	ENSPFOG00000017775	rab15	79	50.296
ENSPFOG00000013810	zgc:171927	97	40.476	ENSPFOG00000011310	rab25b	96	40.476
ENSPFOG00000013810	zgc:171927	67	43.709	ENSPFOG00000022360	-	63	43.709
ENSPFOG00000013810	zgc:171927	87	34.921	ENSPFOG00000008890	rras	82	34.921
ENSPFOG00000013810	zgc:171927	75	64.198	ENSPFOG00000004746	si:dkey-16l2.16	77	64.198
ENSPFOG00000013810	zgc:171927	72	37.888	ENSPFOG00000020060	rab9b	80	37.888
ENSPFOG00000013810	zgc:171927	82	43.575	ENSPFOG00000004684	-	84	43.575
ENSPFOG00000013810	zgc:171927	94	35.681	ENSPFOG00000008547	rab34a	66	35.681
ENSPFOG00000013810	zgc:171927	77	51.190	ENSPFOG00000006159	rab11ba	77	51.190
ENSPFOG00000013810	zgc:171927	71	33.766	ENSPFOG00000001515	rhebl1	83	33.766
ENSPFOG00000013810	zgc:171927	78	41.040	ENSPFOG00000014499	si:dkey-34d22.5	78	41.040
ENSPFOG00000013810	zgc:171927	78	49.704	ENSPFOG00000004786	rab2a	80	49.704
ENSPFOG00000013810	zgc:171927	76	39.645	ENSPFOG00000003465	RAB7A	82	39.645
ENSPFOG00000013810	zgc:171927	74	40.373	ENSPFOG00000011424	RAB41	76	40.373
ENSPFOG00000013810	zgc:171927	78	43.931	ENSPFOG00000019144	-	71	43.931
ENSPFOG00000013810	zgc:171927	78	42.857	ENSPFOG00000000349	rab33ba	75	42.857
ENSPFOG00000013810	zgc:171927	57	32.800	ENSPFOG00000020447	arl4d	61	32.800
ENSPFOG00000013810	zgc:171927	73	38.272	ENSPFOG00000015409	si:dkey-13a21.4	79	38.272
ENSPFOG00000013810	zgc:171927	71	37.736	ENSPFOG00000022477	-	73	37.736
ENSPFOG00000013810	zgc:171927	72	37.179	ENSPFOG00000011493	rab23	75	35.028
ENSPFOG00000013810	zgc:171927	87	39.286	ENSPFOG00000004037	rab33a	58	42.683
ENSPFOG00000013810	zgc:171927	94	40.777	ENSPFOG00000010632	rab25a	91	40.777
ENSPFOG00000013810	zgc:171927	54	30.508	ENSPFOG00000016361	arl8ba	61	30.508
ENSPFOG00000013810	zgc:171927	73	40.506	ENSPFOG00000013027	rab22a	96	40.506
ENSPFOG00000013810	zgc:171927	75	48.466	ENSPFOG00000013182	RAB15	78	48.466
ENSPFOG00000013810	zgc:171927	54	32.203	ENSPFOG00000012465	arl8a	61	32.203
ENSPFOG00000013810	zgc:171927	75	66.049	ENSPFOG00000006655	rab35b	80	66.049
ENSPFOG00000013810	zgc:171927	80	43.678	ENSPFOG00000005901	-	78	43.678
ENSPFOG00000013810	zgc:171927	72	36.306	ENSPFOG00000017960	rabl2	69	36.306
ENSPFOG00000013810	zgc:171927	76	35.928	ENSPFOG00000000601	si:ch73-116o1.2	80	35.928
ENSPFOG00000013810	zgc:171927	91	77.500	ENSPFOG00000001829	rab1ab	99	77.500
ENSPFOG00000013810	zgc:171927	75	46.012	ENSPFOG00000023458	rab5c	85	44.211
ENSPFOG00000013810	zgc:171927	91	76.142	ENSPFOG00000000498	-	95	76.142
ENSPFOG00000013810	zgc:171927	74	40.373	ENSPFOG00000003742	rab6ba	77	40.373
ENSPFOG00000013810	zgc:171927	97	43.602	ENSPFOG00000011316	rab11al	96	43.602
ENSPFOG00000013810	zgc:171927	79	44.809	ENSPFOG00000009101	-	78	44.809
ENSPFOG00000013810	zgc:171927	82	31.282	ENSPFOG00000003006	rasl11a	75	31.282
ENSPFOG00000013810	zgc:171927	72	34.177	ENSPFOG00000004921	rheb	85	34.177
ENSPFOG00000013810	zgc:171927	83	45.604	ENSPFOG00000011263	rab5aa	82	45.604
ENSPFOG00000013810	zgc:171927	77	36.095	ENSPFOG00000002595	hrasb	88	36.095
ENSPFOG00000013810	zgc:171927	97	46.445	ENSPFOG00000005479	rab30	97	46.445
ENSPFOG00000013810	zgc:171927	75	46.012	ENSPFOG00000012082	rab5c	85	44.211
ENSPFOG00000013810	zgc:171927	80	46.243	ENSPFOG00000014630	rab4a	81	46.243
ENSPFOG00000013810	zgc:171927	75	38.415	ENSPFOG00000015499	kras	86	38.415
ENSPFOG00000013810	zgc:171927	82	44.134	ENSPFOG00000004492	RAB39B	84	44.134
ENSPFOG00000013810	zgc:171927	74	50.000	ENSPFOG00000013491	rab18b	79	50.000
ENSPFOG00000013810	zgc:171927	85	32.673	ENSPFOG00000013066	RAB29	95	32.673
ENSPFOG00000013810	zgc:171927	54	30.252	ENSPFOG00000020283	arl4cb	61	30.252
ENSPFOG00000013810	zgc:171927	76	44.910	ENSPFOG00000004838	rab42a	63	44.910
ENSPFOG00000013810	zgc:171927	91	52.792	ENSPFOG00000014418	-	95	52.792
ENSPFOG00000013810	zgc:171927	74	40.373	ENSPFOG00000012977	rab22a	83	40.373

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPFOG00000013810	zgc:171927	99	93.458	ENSAPOG00000004980	-	100	93.458	Acanthochromis_polyacanthus
ENSPFOG00000013810	zgc:171927	99	92.991	ENSACIG00000009006	zgc:171927	100	92.991	Amphilophus_citrinellus
ENSPFOG00000013810	zgc:171927	70	89.677	ENSAOCG00000013808	-	93	98.347	Amphiprion_ocellaris
ENSPFOG00000013810	zgc:171927	99	91.589	ENSAOCG00000024149	-	100	91.589	Amphiprion_ocellaris
ENSPFOG00000013810	zgc:171927	99	92.056	ENSAPEG00000022171	zgc:171927	99	92.056	Amphiprion_percula
ENSPFOG00000013810	zgc:171927	99	92.991	ENSATEG00000003430	zgc:171927	100	92.991	Anabas_testudineus
ENSPFOG00000013810	zgc:171927	99	92.991	ENSACLG00000013734	-	100	92.991	Astatotilapia_calliptera
ENSPFOG00000013810	zgc:171927	99	78.605	ENSAMXG00000039486	zgc:171927	100	78.605	Astyanax_mexicanus
ENSPFOG00000013810	zgc:171927	99	89.252	ENSCSEG00000014416	zgc:171927	100	89.252	Cynoglossus_semilaevis
ENSPFOG00000013810	zgc:171927	99	93.925	ENSCVAG00000009222	zgc:171927	100	93.925	Cyprinodon_variegatus
ENSPFOG00000013810	zgc:171927	99	78.605	ENSDARG00000033056	zgc:171927	100	78.605	Danio_rerio
ENSPFOG00000013810	zgc:171927	99	79.167	ENSELUG00000011680	zgc:171927	100	79.167	Esox_lucius
ENSPFOG00000013810	zgc:171927	99	93.925	ENSFHEG00000022176	zgc:171927	100	93.925	Fundulus_heteroclitus
ENSPFOG00000013810	zgc:171927	96	77.251	ENSGMOG00000004979	-	97	77.251	Gadus_morhua
ENSPFOG00000013810	zgc:171927	96	96.172	ENSGAFG00000015702	zgc:171927	84	96.172	Gambusia_affinis
ENSPFOG00000013810	zgc:171927	100	88.940	ENSGACG00000013401	zgc:171927	100	88.940	Gasterosteus_aculeatus
ENSPFOG00000013810	zgc:171927	99	92.991	ENSHBUG00000002397	-	100	92.991	Haplochromis_burtoni
ENSPFOG00000013810	zgc:171927	99	92.523	ENSKMAG00000009856	zgc:171927	100	92.523	Kryptolebias_marmoratus
ENSPFOG00000013810	zgc:171927	99	91.121	ENSLBEG00000005791	-	100	91.121	Labrus_bergylta
ENSPFOG00000013810	zgc:171927	96	90.431	ENSLBEG00000027226	-	89	90.431	Labrus_bergylta
ENSPFOG00000013810	zgc:171927	100	70.183	ENSLOCG00000014692	zgc:171927	99	70.183	Lepisosteus_oculatus
ENSPFOG00000013810	zgc:171927	99	90.654	ENSMAMG00000020135	zgc:171927	100	90.654	Mastacembelus_armatus
ENSPFOG00000013810	zgc:171927	99	92.991	ENSMZEG00005024685	-	100	92.991	Maylandia_zebra
ENSPFOG00000013810	zgc:171927	99	88.318	ENSMMOG00000009833	-	100	88.318	Mola_mola
ENSPFOG00000013810	zgc:171927	99	89.252	ENSMALG00000021129	zgc:171927	100	89.252	Monopterus_albus
ENSPFOG00000013810	zgc:171927	99	92.523	ENSNBRG00000006202	zgc:171927	100	92.523	Neolamprologus_brichardi
ENSPFOG00000013810	zgc:171927	99	90.187	ENSORLG00000000602	zgc:171927	100	90.187	Oryzias_latipes
ENSPFOG00000013810	zgc:171927	99	90.187	ENSORLG00020021071	zgc:171927	100	90.187	Oryzias_latipes_hni
ENSPFOG00000013810	zgc:171927	99	90.187	ENSORLG00015010098	zgc:171927	100	90.187	Oryzias_latipes_hsok
ENSPFOG00000013810	zgc:171927	99	91.121	ENSOMEG00000020594	zgc:171927	100	91.121	Oryzias_melastigma
ENSPFOG00000013810	zgc:171927	99	98.131	ENSPLAG00000005869	zgc:171927	100	98.131	Poecilia_latipinna
ENSPFOG00000013810	zgc:171927	99	100.000	ENSPMEG00000022350	zgc:171927	100	100.000	Poecilia_mexicana
ENSPFOG00000013810	zgc:171927	99	99.065	ENSPREG00000017517	zgc:171927	100	99.065	Poecilia_reticulata
ENSPFOG00000013810	zgc:171927	99	92.991	ENSPNYG00000007520	-	100	92.991	Pundamilia_nyererei
ENSPFOG00000013810	zgc:171927	99	79.535	ENSPNAG00000029574	zgc:171927	100	79.535	Pygocentrus_nattereri
ENSPFOG00000013810	zgc:171927	99	77.209	ENSSFOG00015005464	zgc:171927	99	77.209	Scleropages_formosus
ENSPFOG00000013810	zgc:171927	99	90.187	ENSSMAG00000004416	-	100	90.187	Scophthalmus_maximus
ENSPFOG00000013810	zgc:171927	99	93.458	ENSSDUG00000004445	zgc:171927	100	93.458	Seriola_dumerili
ENSPFOG00000013810	zgc:171927	99	93.458	ENSSLDG00000018024	zgc:171927	100	93.458	Seriola_lalandi_dorsalis
ENSPFOG00000013810	zgc:171927	99	93.458	ENSSPAG00000013533	zgc:171927	100	93.458	Stegastes_partitus
ENSPFOG00000013810	zgc:171927	99	97.664	ENSXCOG00000010695	zgc:171927	100	97.664	Xiphophorus_couchianus
ENSPFOG00000013810	zgc:171927	99	98.131	ENSXMAG00000004683	zgc:171927	100	98.131	Xiphophorus_maculatus